RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 LGALS2P05162 132 aa10.42□□□□□ -0.74
HDAC6-232ENST00000489053 SELPP16109 830 aa10.42□□□□□ -0.74
HDAC6-232ENST00000489053 CDC27P30260 824 aa10.42□□□□□ -0.74
HDAC6-232ENST00000489053 KCNJ6P48051 423 aa10.42□□□□□ -0.74
HDAC6-232ENST00000489053 CCT2P78371 535 aaKnown RBP10.42□□□□□ -0.74
HDAC6-232ENST00000489053 SP2Q02086 613 aa10.42□□□□□ -0.74
HDAC6-232ENST00000489053 SSRP1Q08945 709 aaKnown RBP10.42□□□□□ -0.74
HDAC6-232ENST00000489053 RAB30Q15771 203 aa10.42□□□□□ -0.74
HDAC6-232ENST00000489053 PFKFB3Q16875 520 aaPredicted RBP10.42□□□□□ -0.74
HDAC6-232ENST00000489053 HSDL1Q3SXM5 330 aa10.42□□□□□ -0.74
HDAC6-232ENST00000489053 TMEM240Q5SV17 173 aa10.42□□□□□ -0.74
HDAC6-232ENST00000489053 FAM109BQ6ICB4 259 aaPredicted RBP10.42□□□□□ -0.74
HDAC6-232ENST00000489053 GDF6Q6KF10 455 aaPredicted RBP10.42□□□□□ -0.74
HDAC6-232ENST00000489053 SESTD1Q86VW0 696 aa10.42□□□□□ -0.74
HDAC6-232ENST00000489053 AFAP1L1Q8TED9 768 aa10.42□□□□□ -0.74
HDAC6-232ENST00000489053 TNPO1Q92973 898 aaKnown RBP10.42□□□□□ -0.74
HDAC6-232ENST00000489053 ATP6V0A1Q93050 837 aa10.42□□□□□ -0.74
HDAC6-232ENST00000489053 PHKBQ93100 1093 aa10.42□□□□□ -0.74
HDAC6-232ENST00000489053 SENP7Q9BQF6 1050 aa10.42□□□□□ -0.74
HDAC6-232ENST00000489053 ANO3Q9BYT9 981 aa10.42□□□□□ -0.74
HDAC6-232ENST00000489053 UPF3BQ9BZI7 483 aaKnown RBP10.42□□□□□ -0.74
HDAC6-232ENST00000489053 TUT1Q9H6E5 874 aaKnown RBP10.42□□□□□ -0.74
HDAC6-232ENST00000489053 ZSWIM6Q9HCJ5 1215 aa10.42□□□□□ -0.74
HDAC6-232ENST00000489053 GTF2IRD1Q9UHL9 959 aa10.42□□□□□ -0.74
HDAC6-232ENST00000489053 MYH6P13533 1939 aa10.42□□□□□ -0.74
HDAC6-232ENST00000489053 LCTP09848 1927 aa10.41□□□□□ -0.74
HDAC6-232ENST00000489053 PRPF3O43395 683 aaKnown RBP10.41□□□□□ -0.74
HDAC6-232ENST00000489053 XBP1P17861 261 aa10.41□□□□□ -0.74
HDAC6-232ENST00000489053 STK3Q13188 491 aa10.41□□□□□ -0.74
HDAC6-232ENST00000489053 PTK7Q13308 1070 aa10.41□□□□□ -0.74
HDAC6-232ENST00000489053 ANKRD1Q15327 319 aa10.41□□□□□ -0.74
HDAC6-232ENST00000489053 JAKMIP3Q5VZ66 844 aa10.41□□□□□ -0.74
HDAC6-232ENST00000489053 HERVK_113Q902F9 699 aa10.41□□□□□ -0.74
HDAC6-232ENST00000489053 KAT2BQ92831 832 aa10.41□□□□□ -0.74
HDAC6-232ENST00000489053 TIFAQ96CG3 184 aa10.41□□□□□ -0.74
HDAC6-232ENST00000489053 RNF26Q9BY78 433 aaPredicted RBP10.41□□□□□ -0.74
HDAC6-232ENST00000489053 TM6SF1Q9BZW5 370 aa10.41□□□□□ -0.74
HDAC6-232ENST00000489053 WNT8AQ9H1J5 351 aa10.41□□□□□ -0.74
HDAC6-232ENST00000489053 JPH1Q9HDC5 661 aaPredicted RBP10.41□□□□□ -0.74
HDAC6-232ENST00000489053 JADE2Q9NQC1 790 aa10.41□□□□□ -0.74
HDAC6-232ENST00000489053 TMEM265A0A087WTH1 108 aa10.4□□□□□ -0.74
HDAC6-232ENST00000489053 KIF28PB7ZC32 967 aa10.4□□□□□ -0.74
HDAC6-232ENST00000489053 BACH1O14867 736 aa10.4□□□□□ -0.74
HDAC6-232ENST00000489053 PPFIA3O75145 1194 aa10.4□□□□□ -0.74
HDAC6-232ENST00000489053 SMIM10L2AP0DMW4 78 aa10.4□□□□□ -0.74
HDAC6-232ENST00000489053 SMIM10L2BP0DMW5 78 aa10.4□□□□□ -0.74
HDAC6-232ENST00000489053 HOXD8P13378 290 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-232ENST00000489053 ATP2A2P16615 1042 aaKnown RBP10.4□□□□□ -0.74
HDAC6-232ENST00000489053 DNAJB2P25686 324 aa10.4□□□□□ -0.74
HDAC6-232ENST00000489053 PDIA3P30101 505 aaKnown RBP10.4□□□□□ -0.74
HDAC6-232ENST00000489053 TCF7P36402 384 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-232ENST00000489053 THPOP40225 353 aa10.4□□□□□ -0.74
HDAC6-232ENST00000489053 NLRP5P59047 1200 aa10.4□□□□□ -0.74
HDAC6-232ENST00000489053 ARHGAP4P98171 946 aa10.4□□□□□ -0.74
HDAC6-232ENST00000489053 CEP55Q53EZ4 464 aa10.4□□□□□ -0.74
HDAC6-232ENST00000489053 LRRC8DQ7L1W4 858 aa10.4□□□□□ -0.74
HDAC6-232ENST00000489053 RSPH3Q86UC2 560 aa10.4□□□□□ -0.74
HDAC6-232ENST00000489053 FBXL16Q8N461 479 aa10.4□□□□□ -0.74
HDAC6-232ENST00000489053 SEPT1Q8WYJ6 367 aa10.4□□□□□ -0.74
HDAC6-232ENST00000489053 PGBD1Q96JS3 809 aa10.4□□□□□ -0.74
HDAC6-232ENST00000489053 GPR20Q99678 358 aa10.4□□□□□ -0.74
HDAC6-232ENST00000489053 MXRA8Q9BRK3 442 aa10.4□□□□□ -0.74
HDAC6-232ENST00000489053 SLKQ9H2G2 1235 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-232ENST00000489053 SLC28A3Q9HAS3 691 aa10.4□□□□□ -0.74
HDAC6-232ENST00000489053 NCOA5Q9HCD5 579 aaKnown RBP10.4□□□□□ -0.74
HDAC6-232ENST00000489053 TMEM260Q9NX78 707 aa10.4□□□□□ -0.74
HDAC6-232ENST00000489053 LTBP2Q14767 1821 aa10.4□□□□□ -0.75
HDAC6-232ENST00000489053 EMSYQ7Z589 1322 aa10.39□□□□□ -0.75
HDAC6-232ENST00000489053 IQCF3P0C7M6 154 aa10.39□□□□□ -0.75
HDAC6-232ENST00000489053 IFNAR1P17181 557 aa10.39□□□□□ -0.75
HDAC6-232ENST00000489053 ITGB5P18084 799 aa10.39□□□□□ -0.75
HDAC6-232ENST00000489053 MARK3P27448 753 aa10.39□□□□□ -0.75
HDAC6-232ENST00000489053 SREBF1P36956 1147 aa10.39□□□□□ -0.75
HDAC6-232ENST00000489053 ANAPC15P60006 121 aa10.39□□□□□ -0.75
HDAC6-232ENST00000489053 SETQ01105 290 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-232ENST00000489053 FUT2Q10981 343 aa10.39□□□□□ -0.75
HDAC6-232ENST00000489053 PPFIA1Q13136 1202 aa10.39□□□□□ -0.75
HDAC6-232ENST00000489053 C16orf59Q7L2K0 433 aa10.39□□□□□ -0.75
HDAC6-232ENST00000489053 PLA2G4DQ86XP0 818 aa10.39□□□□□ -0.75
HDAC6-232ENST00000489053 TRIM50Q86XT4 487 aa10.39□□□□□ -0.75
HDAC6-232ENST00000489053 ZNF274Q96GC6 653 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-232ENST00000489053 C16orf70Q9BSU1 422 aa10.39□□□□□ -0.75
HDAC6-232ENST00000489053 ZBED2Q9BTP6 218 aa10.39□□□□□ -0.75
HDAC6-232ENST00000489053 C22orf23Q9BZE7 217 aa10.39□□□□□ -0.75
HDAC6-232ENST00000489053 SEMA6BQ9H3T3 888 aa10.39□□□□□ -0.75
HDAC6-232ENST00000489053 SMARCAD1Q9H4L7 1026 aa10.39□□□□□ -0.75
HDAC6-232ENST00000489053 KCNH7Q9NS40 1196 aa10.39□□□□□ -0.75
HDAC6-232ENST00000489053 FAM217BQ9NTX9 383 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-232ENST00000489053 MTMR10Q9NXD2 777 aa10.39□□□□□ -0.75
HDAC6-232ENST00000489053 ERAP1Q9NZ08 941 aa10.39□□□□□ -0.75
HDAC6-232ENST00000489053 SLC9A2Q9UBY0 812 aa10.39□□□□□ -0.75
HDAC6-232ENST00000489053 TRPC6Q9Y210 931 aa10.39□□□□□ -0.75
HDAC6-232ENST00000489053 STXBP5LQ9Y2K9 1186 aa10.39□□□□□ -0.75
HDAC6-232ENST00000489053 UBIAD1Q9Y5Z9 338 aa10.39□□□□□ -0.75
HDAC6-232ENST00000489053 NRCAMQ92823 1304 aa10.38□□□□□ -0.75
HDAC6-232ENST00000489053 ESYT2A0FGR8 921 aa10.38□□□□□ -0.75
HDAC6-232ENST00000489053 RSPH10B2B2RC85 870 aa10.38□□□□□ -0.75
HDAC6-232ENST00000489053 DDX39AO00148 427 aaKnown RBP10.38□□□□□ -0.75
HDAC6-232ENST00000489053 HAS3O00219 553 aa10.38□□□□□ -0.75
HDAC6-232ENST00000489053 EFCAB14O75071 495 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms