RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 IPO9Q96P70 1041 aaKnown RBP5.64□□□□□ -1.51
RFC4-213ENST00000489028 ALG1Q9BT22 464 aa5.64□□□□□ -1.51
RFC4-213ENST00000489028 C11orf84Q9BUA3 381 aaPredicted RBP5.64□□□□□ -1.51
RFC4-213ENST00000489028 DTLQ9NZJ0 730 aa5.64□□□□□ -1.51
RFC4-213ENST00000489028 NDOR1Q9UHB4 597 aa5.64□□□□□ -1.51
RFC4-213ENST00000489028 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.63□□□□□ -1.51
RFC4-213ENST00000489028 SH3D21A4FU49 640 aa5.63□□□□□ -1.51
RFC4-213ENST00000489028 FAM47E-STBD1D6RA91 191 aa5.63□□□□□ -1.51
RFC4-213ENST00000489028 KRIT1O00522 736 aa5.63□□□□□ -1.51
RFC4-213ENST00000489028 RASGRP1O95267 797 aa5.63□□□□□ -1.51
RFC4-213ENST00000489028 CRTAMO95727 393 aa5.63□□□□□ -1.51
RFC4-213ENST00000489028 GUCY1A3Q02108 690 aa5.63□□□□□ -1.51
RFC4-213ENST00000489028 GRIN1Q05586 938 aa5.63□□□□□ -1.51
RFC4-213ENST00000489028 PAK1Q13153 545 aa5.63□□□□□ -1.51
RFC4-213ENST00000489028 ADAM9Q13443 819 aa5.63□□□□□ -1.51
RFC4-213ENST00000489028 TUSC3Q13454 348 aa5.63□□□□□ -1.51
RFC4-213ENST00000489028 RTP5Q14D33 572 aa5.63□□□□□ -1.51
RFC4-213ENST00000489028 NFE2L2Q16236 605 aa5.63□□□□□ -1.51
RFC4-213ENST00000489028 TRIM61Q5EBN2 209 aa5.63□□□□□ -1.51
RFC4-213ENST00000489028 ZC3H12BQ5HYM0 836 aaKnown RBP5.63□□□□□ -1.51
RFC4-213ENST00000489028 CYP4F22Q6NT55 531 aa5.63□□□□□ -1.51
RFC4-213ENST00000489028 TEPPQ6URK8 271 aa5.63□□□□□ -1.51
RFC4-213ENST00000489028 TTLL10Q6ZVT0 673 aa5.63□□□□□ -1.51
RFC4-213ENST00000489028 DPH6Q7L8W6 267 aa5.63□□□□□ -1.51
RFC4-213ENST00000489028 PROSER1Q86XN7 944 aa5.63□□□□□ -1.51
RFC4-213ENST00000489028 PHOSPHO1Q8TCT1 267 aa5.63□□□□□ -1.51
RFC4-213ENST00000489028 TOE1Q96GM8 510 aaKnown RBP5.63□□□□□ -1.51
RFC4-213ENST00000489028 SCLYQ96I15 445 aa5.63□□□□□ -1.51
RFC4-213ENST00000489028 WNT9AO14904 365 aa5.62□□□□□ -1.51
RFC4-213ENST00000489028 SRGAP2CP0DJJ0 459 aa5.62□□□□□ -1.51
RFC4-213ENST00000489028 THBS2P35442 1172 aa5.62□□□□□ -1.51
RFC4-213ENST00000489028 SLURP1P55000 103 aa5.62□□□□□ -1.51
RFC4-213ENST00000489028 SPIRE1Q08AE8 756 aa5.62□□□□□ -1.51
RFC4-213ENST00000489028 ZC3H18Q86VM9 953 aaKnown RBP5.62□□□□□ -1.51
RFC4-213ENST00000489028 FEZF2Q8TBJ5 459 aa5.62□□□□□ -1.51
RFC4-213ENST00000489028 SPATA25Q9BR10 227 aa5.62□□□□□ -1.51
RFC4-213ENST00000489028 YIPF4Q9BSR8 244 aa5.62□□□□□ -1.51
RFC4-213ENST00000489028 CD244Q9BZW8 370 aa5.62□□□□□ -1.51
RFC4-213ENST00000489028 XYLT2Q9H1B5 865 aa5.62□□□□□ -1.51
RFC4-213ENST00000489028 PARD6AQ9NPB6 346 aa5.62□□□□□ -1.51
RFC4-213ENST00000489028 CBLCQ9ULV8 474 aa5.62□□□□□ -1.51
RFC4-213ENST00000489028 AMY2AP04746 511 aa5.61□□□□□ -1.51
RFC4-213ENST00000489028 PYGMP11217 842 aa5.61□□□□□ -1.51
RFC4-213ENST00000489028 AMY2BP19961 511 aa5.61□□□□□ -1.51
RFC4-213ENST00000489028 HOXA5P20719 270 aa5.61□□□□□ -1.51
RFC4-213ENST00000489028 NKX3-2P78367 333 aa5.61□□□□□ -1.51
RFC4-213ENST00000489028 PRR31Q5SQ13 230 aa5.61□□□□□ -1.51
RFC4-213ENST00000489028 BRAPQ7Z569 592 aa5.61□□□□□ -1.51
RFC4-213ENST00000489028 FGD2Q7Z6J4 655 aa5.61□□□□□ -1.51
RFC4-213ENST00000489028 CARFQ8N187 725 aa5.61□□□□□ -1.51
RFC4-213ENST00000489028 KYQ8NBH2 561 aa5.61□□□□□ -1.51
RFC4-213ENST00000489028 TTLL11Q8NHH1 800 aa5.61□□□□□ -1.51
RFC4-213ENST00000489028 SH3TC2Q8TF17 1288 aa5.61□□□□□ -1.51
RFC4-213ENST00000489028 MRFAP1L1Q96HT8 127 aa5.61□□□□□ -1.51
RFC4-213ENST00000489028 ZSWIM3Q96MP5 696 aa5.61□□□□□ -1.51
RFC4-213ENST00000489028 ZCCHC4Q9H5U6 513 aa5.61□□□□□ -1.51
RFC4-213ENST00000489028 NCOA5Q9HCD5 579 aaKnown RBP5.61□□□□□ -1.51
RFC4-213ENST00000489028 TRIM39Q9HCM9 518 aa5.61□□□□□ -1.51
RFC4-213ENST00000489028 DSEQ9UL01 958 aa5.61□□□□□ -1.51
RFC4-213ENST00000489028 A0A0G2JLL6 359 aaPredicted RBP5.6□□□□□ -1.51
RFC4-213ENST00000489028 OTOL1A6NHN0 477 aaPredicted RBP5.6□□□□□ -1.51
RFC4-213ENST00000489028 ACOT7O00154 380 aa5.6□□□□□ -1.51
RFC4-213ENST00000489028 MAFKO60675 156 aa5.6□□□□□ -1.51
RFC4-213ENST00000489028 CKMP06732 381 aa5.6□□□□□ -1.51
RFC4-213ENST00000489028 PDE6AP16499 860 aa5.6□□□□□ -1.51
RFC4-213ENST00000489028 EPHA5P54756 1037 aa5.6□□□□□ -1.51
RFC4-213ENST00000489028 TMC5Q6UXY8 1006 aa5.6□□□□□ -1.51
RFC4-213ENST00000489028 KCTD1Q719H9 257 aa5.6□□□□□ -1.51
RFC4-213ENST00000489028 FBXW5Q969U6 566 aa5.6□□□□□ -1.51
RFC4-213ENST00000489028 C20orf173Q96LM9 149 aa5.6□□□□□ -1.51
RFC4-213ENST00000489028 CLUHP3Q96NS8 147 aa5.6□□□□□ -1.51
RFC4-213ENST00000489028 MRPL4Q9BYD3 311 aaKnown RBP5.6□□□□□ -1.51
RFC4-213ENST00000489028 PDGFDQ9GZP0 370 aaPredicted RBP5.6□□□□□ -1.51
RFC4-213ENST00000489028 LUC7LQ9NQ29 371 aaKnown RBP5.6□□□□□ -1.51
RFC4-213ENST00000489028 HSPBP1Q9NZL4 362 aa5.6□□□□□ -1.51
RFC4-213ENST00000489028 SFMBT1Q9UHJ3 866 aa5.6□□□□□ -1.51
RFC4-213ENST00000489028 CCDC66A2RUB6 948 aa5.59□□□□□ -1.51
RFC4-213ENST00000489028 KRTAP9-7A8MTY7 169 aa5.59□□□□□ -1.51
RFC4-213ENST00000489028 MAN2B1O00754 1011 aa5.59□□□□□ -1.51
RFC4-213ENST00000489028 KCNK3O14649 394 aa5.59□□□□□ -1.51
RFC4-213ENST00000489028 KCNQ2O43526 872 aa5.59□□□□□ -1.51
RFC4-213ENST00000489028 RAPGEF3O95398 923 aa5.59□□□□□ -1.51
RFC4-213ENST00000489028 KCNA6P17658 529 aa5.59□□□□□ -1.51
RFC4-213ENST00000489028 JAM2P57087 298 aa5.59□□□□□ -1.51
RFC4-213ENST00000489028 PAN2Q504Q3 1202 aaKnown RBP5.59□□□□□ -1.51
RFC4-213ENST00000489028 PHF19Q5T6S3 580 aa5.59□□□□□ -1.51
RFC4-213ENST00000489028 FSTL4Q6MZW2 842 aa5.59□□□□□ -1.51
RFC4-213ENST00000489028 ABHD17CQ6PCB6 329 aa5.59□□□□□ -1.51
RFC4-213ENST00000489028 ARHGAP36Q6ZRI8 547 aa5.59□□□□□ -1.51
RFC4-213ENST00000489028 C16orf59Q7L2K0 433 aa5.59□□□□□ -1.51
RFC4-213ENST00000489028 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.59□□□□□ -1.51
RFC4-213ENST00000489028 OSTM1Q86WC4 334 aa5.59□□□□□ -1.51
RFC4-213ENST00000489028 PTRH1Q86Y79 214 aaKnown RBP5.59□□□□□ -1.51
RFC4-213ENST00000489028 TRIM48Q8IWZ4 208 aa5.59□□□□□ -1.51
RFC4-213ENST00000489028 SMURF1Q9HCE7 757 aa5.59□□□□□ -1.51
RFC4-213ENST00000489028 PCDH18Q9HCL0 1135 aa5.59□□□□□ -1.51
RFC4-213ENST00000489028 NGRNQ9NPE2 291 aaKnown RBP5.59□□□□□ -1.51
RFC4-213ENST00000489028 CATSPERZQ9NTU4 200 aa5.59□□□□□ -1.51
RFC4-213ENST00000489028 NTMQ9P121 344 aa5.59□□□□□ -1.51
RFC4-213ENST00000489028 SRPK3Q9UPE1 567 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms