RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 PCDHA8Q9Y5H6 950 aa13.71□□□□□ -0.21
CCHCR1-215ENST00000488920 PCDHA11Q9Y5I1 949 aa13.71□□□□□ -0.21
CCHCR1-215ENST00000488920 KIAA1217Q5T5P2 1943 aa13.7□□□□□ -0.22
CCHCR1-215ENST00000488920 SPDYE3A6NKU9 549 aa13.7□□□□□ -0.22
CCHCR1-215ENST00000488920 GOLGA8AA7E2F4 631 aa13.7□□□□□ -0.22
CCHCR1-215ENST00000488920 GOLGA8BA8MQT2 603 aa13.7□□□□□ -0.22
CCHCR1-215ENST00000488920 NBNO60934 754 aa13.7□□□□□ -0.22
CCHCR1-215ENST00000488920 ATP9AO75110 1047 aa13.7□□□□□ -0.22
CCHCR1-215ENST00000488920 SMIM10L2AP0DMW4 78 aa13.7□□□□□ -0.22
CCHCR1-215ENST00000488920 SMIM10L2BP0DMW5 78 aa13.7□□□□□ -0.22
CCHCR1-215ENST00000488920 ITGB5P18084 799 aa13.7□□□□□ -0.22
CCHCR1-215ENST00000488920 TRIM71Q2Q1W2 868 aaKnown RBP13.7□□□□□ -0.22
CCHCR1-215ENST00000488920 ZNF618Q5T7W0 954 aa13.7□□□□□ -0.22
CCHCR1-215ENST00000488920 KCNB2Q92953 911 aa13.7□□□□□ -0.22
CCHCR1-215ENST00000488920 JAKMIP1Q96N16 626 aaKnown RBP13.7□□□□□ -0.22
CCHCR1-215ENST00000488920 SENP7Q9BQF6 1050 aa13.7□□□□□ -0.22
CCHCR1-215ENST00000488920 USP26Q9BXU7 913 aa13.7□□□□□ -0.22
CCHCR1-215ENST00000488920 FAM217BQ9NTX9 383 aaPredicted RBP13.7□□□□□ -0.22
CCHCR1-215ENST00000488920 SNX14Q9Y5W7 946 aa13.7□□□□□ -0.22
CCHCR1-215ENST00000488920 CNTNAP5Q8WYK1 1306 aa13.69□□□□□ -0.22
CCHCR1-215ENST00000488920 UNC80Q8N2C7 3258 aa13.69□□□□□ -0.22
CCHCR1-215ENST00000488920 CHD9Q3L8U1 2897 aa13.69□□□□□ -0.22
CCHCR1-215ENST00000488920 C17orf102A2RUQ5 167 aa13.69□□□□□ -0.22
CCHCR1-215ENST00000488920 CDC27P30260 824 aa13.69□□□□□ -0.22
CCHCR1-215ENST00000488920 HSPA4P34932 840 aa13.69□□□□□ -0.22
CCHCR1-215ENST00000488920 THPOP40225 353 aa13.69□□□□□ -0.22
CCHCR1-215ENST00000488920 NAPAP54920 295 aa13.69□□□□□ -0.22
CCHCR1-215ENST00000488920 RBL2Q08999 1139 aa13.69□□□□□ -0.22
CCHCR1-215ENST00000488920 APOBRQ0VD83 1088 aa13.69□□□□□ -0.22
CCHCR1-215ENST00000488920 ADGRE1Q14246 886 aa13.69□□□□□ -0.22
CCHCR1-215ENST00000488920 TCTN1Q2MV58 587 aa13.69□□□□□ -0.22
CCHCR1-215ENST00000488920 PPP2R2DQ66LE6 453 aa13.69□□□□□ -0.22
CCHCR1-215ENST00000488920 TYW1BQ6NUM6 668 aa13.69□□□□□ -0.22
CCHCR1-215ENST00000488920 TRAF7Q6Q0C0 670 aa13.69□□□□□ -0.22
CCHCR1-215ENST00000488920 Q6ZUG5 572 aa13.69□□□□□ -0.22
CCHCR1-215ENST00000488920 SERINC5Q86VE9 423 aa13.69□□□□□ -0.22
CCHCR1-215ENST00000488920 TRIM50Q86XT4 487 aa13.69□□□□□ -0.22
CCHCR1-215ENST00000488920 PHOSPHO2Q8TCD6 241 aa13.69□□□□□ -0.22
CCHCR1-215ENST00000488920 PPM1EQ8WY54 764 aa13.69□□□□□ -0.22
CCHCR1-215ENST00000488920 ATP6V0A1Q93050 837 aa13.69□□□□□ -0.22
CCHCR1-215ENST00000488920 GPRASP2Q96D09 838 aa13.69□□□□□ -0.22
CCHCR1-215ENST00000488920 GAS2L1Q99501 681 aaPredicted RBP13.69□□□□□ -0.22
CCHCR1-215ENST00000488920 RNPEPQ9H4A4 650 aa13.69□□□□□ -0.22
CCHCR1-215ENST00000488920 PKD2L1Q9P0L9 805 aa13.69□□□□□ -0.22
CCHCR1-215ENST00000488920 UBIAD1Q9Y5Z9 338 aa13.69□□□□□ -0.22
CCHCR1-215ENST00000488920 STXBP3O00186 592 aa13.68□□□□□ -0.22
CCHCR1-215ENST00000488920 TREHO43280 583 aa13.68□□□□□ -0.22
CCHCR1-215ENST00000488920 BAIAP3O94812 1187 aa13.68□□□□□ -0.22
CCHCR1-215ENST00000488920 PARNO95453 639 aaKnown RBP13.68□□□□□ -0.22
CCHCR1-215ENST00000488920 CXCL10P02778 98 aa13.68□□□□□ -0.22
CCHCR1-215ENST00000488920 CA3P07451 260 aa13.68□□□□□ -0.22
CCHCR1-215ENST00000488920 KCNA2P16389 499 aa13.68□□□□□ -0.22
CCHCR1-215ENST00000488920 IGFBP4P22692 258 aa13.68□□□□□ -0.22
CCHCR1-215ENST00000488920 ADD1P35611 737 aaKnown RBP13.68□□□□□ -0.22
CCHCR1-215ENST00000488920 MTMR1Q13613 665 aa13.68□□□□□ -0.22
CCHCR1-215ENST00000488920 MBTPS1Q14703 1052 aa13.68□□□□□ -0.22
CCHCR1-215ENST00000488920 TMCO2Q7Z6W1 182 aaPredicted RBP13.68□□□□□ -0.22
CCHCR1-215ENST00000488920 HERC6Q8IVU3 1022 aa13.68□□□□□ -0.22
CCHCR1-215ENST00000488920 USP38Q8NB14 1042 aa13.68□□□□□ -0.22
CCHCR1-215ENST00000488920 GIMAP8Q8ND71 665 aaPredicted RBP13.68□□□□□ -0.22
CCHCR1-215ENST00000488920 BRF1Q92994 677 aa13.68□□□□□ -0.22
CCHCR1-215ENST00000488920 CDHR1Q96JP9 859 aa13.68□□□□□ -0.22
CCHCR1-215ENST00000488920 PGBD1Q96JS3 809 aa13.68□□□□□ -0.22
CCHCR1-215ENST00000488920 SLC9A7Q96T83 725 aa13.68□□□□□ -0.22
CCHCR1-215ENST00000488920 RIC8AQ9NPQ8 531 aa13.68□□□□□ -0.22
CCHCR1-215ENST00000488920 JADE2Q9NQC1 790 aa13.68□□□□□ -0.22
CCHCR1-215ENST00000488920 SETD4Q9NVD3 440 aa13.68□□□□□ -0.22
CCHCR1-215ENST00000488920 PRUNE2Q8WUY3 3088 aa13.68□□□□□ -0.22
CCHCR1-215ENST00000488920 SMCO2A6NFE2 343 aa13.67□□□□□ -0.22
CCHCR1-215ENST00000488920 RSPH10B2B2RC85 870 aa13.67□□□□□ -0.22
CCHCR1-215ENST00000488920 RSPH10BP0C881 870 aa13.67□□□□□ -0.22
CCHCR1-215ENST00000488920 HOXC8P31273 242 aa13.67□□□□□ -0.22
CCHCR1-215ENST00000488920 TCF7P36402 384 aaPredicted RBP13.67□□□□□ -0.22
CCHCR1-215ENST00000488920 KCNJ6P48051 423 aa13.67□□□□□ -0.22
CCHCR1-215ENST00000488920 ADCY7P51828 1080 aa13.67□□□□□ -0.22
CCHCR1-215ENST00000488920 WDR5P61964 334 aaKnown RBP13.67□□□□□ -0.22
CCHCR1-215ENST00000488920 CNKSR3Q6P9H4 555 aa13.67□□□□□ -0.22
CCHCR1-215ENST00000488920 BLOC1S2Q6QNY1 142 aa13.67□□□□□ -0.22
CCHCR1-215ENST00000488920 CYP2W1Q8TAV3 490 aa13.67□□□□□ -0.22
CCHCR1-215ENST00000488920 EHMT1Q9H9B1 1298 aa13.67□□□□□ -0.22
CCHCR1-215ENST00000488920 CERS4Q9HA82 394 aa13.67□□□□□ -0.22
CCHCR1-215ENST00000488920 TMEM260Q9NX78 707 aa13.67□□□□□ -0.22
CCHCR1-215ENST00000488920 BARHL2Q9NY43 387 aa13.67□□□□□ -0.22
CCHCR1-215ENST00000488920 ZNF215Q9UL58 517 aaPredicted RBP13.67□□□□□ -0.22
CCHCR1-215ENST00000488920 GSTTP1A0A1W2PQM5 241 aa13.66□□□□□ -0.22
CCHCR1-215ENST00000488920 KIF28PB7ZC32 967 aa13.66□□□□□ -0.22
CCHCR1-215ENST00000488920 REC8O95072 547 aa13.66□□□□□ -0.22
CCHCR1-215ENST00000488920 GNAT1P11488 350 aa13.66□□□□□ -0.22
CCHCR1-215ENST00000488920 RPS6KB1P23443 525 aa13.66□□□□□ -0.22
CCHCR1-215ENST00000488920 METAP2P50579 478 aaKnown RBP eCLIP13.66□□□□□ -0.22
CCHCR1-215ENST00000488920 DEFB103AP81534 67 aa13.66□□□□□ -0.22
CCHCR1-215ENST00000488920 IKBKEQ14164 716 aa13.66□□□□□ -0.22
CCHCR1-215ENST00000488920 CCDC85BQ15834 202 aaPredicted RBP13.66□□□□□ -0.22
CCHCR1-215ENST00000488920 PPP1R18Q6NYC8 613 aa13.66□□□□□ -0.22
CCHCR1-215ENST00000488920 SEPT1Q8WYJ6 367 aa13.66□□□□□ -0.22
CCHCR1-215ENST00000488920 MXRA8Q9BRK3 442 aa13.66□□□□□ -0.22
CCHCR1-215ENST00000488920 SCN5AQ14524 2016 aa13.66□□□□□ -0.22
CCHCR1-215ENST00000488920 CCDC196A0A1B0GTZ2 297 aa13.65□□□□□ -0.22
CCHCR1-215ENST00000488920 ABHD14A-ACY1A0A1B0GW23 586 aa13.65□□□□□ -0.22
CCHCR1-215ENST00000488920 RFXAPO00287 272 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms