RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 CSF2RAP15509 400 aa12.76□□□□□ -0.37
ARHGEF39-204ENST00000488918 ARHGAP4P98171 946 aa12.76□□□□□ -0.37
ARHGEF39-204ENST00000488918 SETQ01105 290 aaPredicted RBP12.76□□□□□ -0.37
ARHGEF39-204ENST00000488918 SP2Q02086 613 aa12.76□□□□□ -0.37
ARHGEF39-204ENST00000488918 TRIM29Q14134 588 aa12.76□□□□□ -0.37
ARHGEF39-204ENST00000488918 LRIT3Q3SXY7 679 aa12.76□□□□□ -0.37
ARHGEF39-204ENST00000488918 CEP55Q53EZ4 464 aa12.76□□□□□ -0.37
ARHGEF39-204ENST00000488918 GALNT17Q6IS24 598 aa12.76□□□□□ -0.37
ARHGEF39-204ENST00000488918 CAGE1Q8TC20 777 aa12.76□□□□□ -0.37
ARHGEF39-204ENST00000488918 SEPT1Q8WYJ6 367 aa12.76□□□□□ -0.37
ARHGEF39-204ENST00000488918 PRO3102Q9H379 93 aa12.76□□□□□ -0.37
ARHGEF39-204ENST00000488918 JPH1Q9HDC5 661 aaPredicted RBP12.76□□□□□ -0.37
ARHGEF39-204ENST00000488918 TMEM260Q9NX78 707 aa12.76□□□□□ -0.37
ARHGEF39-204ENST00000488918 NID2Q14112 1375 aa12.76□□□□□ -0.37
ARHGEF39-204ENST00000488918 C17orf102A2RUQ5 167 aa12.75□□□□□ -0.37
ARHGEF39-204ENST00000488918 ZBBXA8MT70 800 aa12.75□□□□□ -0.37
ARHGEF39-204ENST00000488918 GRIN2DO15399 1336 aa12.75□□□□□ -0.37
ARHGEF39-204ENST00000488918 MARCH6O60337 910 aa12.75□□□□□ -0.37
ARHGEF39-204ENST00000488918 F2P00734 622 aa12.75□□□□□ -0.37
ARHGEF39-204ENST00000488918 LGALS2P05162 132 aa12.75□□□□□ -0.37
ARHGEF39-204ENST00000488918 PFKMP08237 780 aa12.75□□□□□ -0.37
ARHGEF39-204ENST00000488918 LCTP09848 1927 aa12.75□□□□□ -0.37
ARHGEF39-204ENST00000488918 ITGB5P18084 799 aa12.75□□□□□ -0.37
ARHGEF39-204ENST00000488918 TCF7P36402 384 aaPredicted RBP12.75□□□□□ -0.37
ARHGEF39-204ENST00000488918 SREBF1P36956 1147 aa12.75□□□□□ -0.37
ARHGEF39-204ENST00000488918 AK2P54819 239 aa12.75□□□□□ -0.37
ARHGEF39-204ENST00000488918 SHHQ15465 462 aa12.75□□□□□ -0.37
ARHGEF39-204ENST00000488918 PLA2G4DQ86XP0 818 aa12.75□□□□□ -0.37
ARHGEF39-204ENST00000488918 FAM177A1Q8N128 213 aaPredicted RBP12.75□□□□□ -0.37
ARHGEF39-204ENST00000488918 NOC4LQ9BVI4 516 aaKnown RBP12.75□□□□□ -0.37
ARHGEF39-204ENST00000488918 IL23AQ9NPF7 189 aa12.75□□□□□ -0.37
ARHGEF39-204ENST00000488918 KCNH7Q9NS40 1196 aa12.75□□□□□ -0.37
ARHGEF39-204ENST00000488918 HDAC6Q9UBN7 1215 aa12.75□□□□□ -0.37
ARHGEF39-204ENST00000488918 SLC9A2Q9UBY0 812 aa12.75□□□□□ -0.37
ARHGEF39-204ENST00000488918 GTF2IRD1Q9UHL9 959 aa12.75□□□□□ -0.37
ARHGEF39-204ENST00000488918 UBIAD1Q9Y5Z9 338 aa12.75□□□□□ -0.37
ARHGEF39-204ENST00000488918 ALPK3Q96L96 1907 aa12.74□□□□□ -0.37
ARHGEF39-204ENST00000488918 CCDC194A0A1B0GVG4 234 aa12.74□□□□□ -0.37
ARHGEF39-204ENST00000488918 PITPNM1O00562 1244 aa12.74□□□□□ -0.37
ARHGEF39-204ENST00000488918 BACH1O14867 736 aa12.74□□□□□ -0.37
ARHGEF39-204ENST00000488918 PFKFB2O60825 505 aa12.74□□□□□ -0.37
ARHGEF39-204ENST00000488918 PARNO95453 639 aaKnown RBP12.74□□□□□ -0.37
ARHGEF39-204ENST00000488918 RFC2P35250 354 aa12.74□□□□□ -0.37
ARHGEF39-204ENST00000488918 FAM160B1Q5W0V3 765 aa12.74□□□□□ -0.37
ARHGEF39-204ENST00000488918 TYW1BQ6NUM6 668 aa12.74□□□□□ -0.37
ARHGEF39-204ENST00000488918 DEFB128Q7Z7B8 93 aa12.74□□□□□ -0.37
ARHGEF39-204ENST00000488918 RSPH3Q86UC2 560 aa12.74□□□□□ -0.37
ARHGEF39-204ENST00000488918 SESTD1Q86VW0 696 aa12.74□□□□□ -0.37
ARHGEF39-204ENST00000488918 PPP1R13LQ8WUF5 828 aa12.74□□□□□ -0.37
ARHGEF39-204ENST00000488918 ATP6V0A1Q93050 837 aa12.74□□□□□ -0.37
ARHGEF39-204ENST00000488918 GPR20Q99678 358 aa12.74□□□□□ -0.37
ARHGEF39-204ENST00000488918 ZNF577Q9BSK1 485 aa12.74□□□□□ -0.37
ARHGEF39-204ENST00000488918 SMARCAD1Q9H4L7 1026 aa12.74□□□□□ -0.37
ARHGEF39-204ENST00000488918 ERAP1Q9NZ08 941 aa12.74□□□□□ -0.37
ARHGEF39-204ENST00000488918 PCDHA4Q9UN74 947 aa12.74□□□□□ -0.37
ARHGEF39-204ENST00000488918 SAMM50Q9Y512 469 aa12.74□□□□□ -0.37
ARHGEF39-204ENST00000488918 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.73□□□□□ -0.37
ARHGEF39-204ENST00000488918 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.73□□□□□ -0.37
ARHGEF39-204ENST00000488918 DDX39AO00148 427 aaKnown RBP12.73□□□□□ -0.37
ARHGEF39-204ENST00000488918 ACRP10323 421 aa12.73□□□□□ -0.37
ARHGEF39-204ENST00000488918 ITGB8P26012 769 aa12.73□□□□□ -0.37
ARHGEF39-204ENST00000488918 SCRN1Q12765 414 aa12.73□□□□□ -0.37
ARHGEF39-204ENST00000488918 PTK7Q13308 1070 aa12.73□□□□□ -0.37
ARHGEF39-204ENST00000488918 NTRK3Q16288 839 aa12.73□□□□□ -0.37
ARHGEF39-204ENST00000488918 PKN1Q16512 942 aa12.73□□□□□ -0.37
ARHGEF39-204ENST00000488918 PRR16Q569H4 304 aa12.73□□□□□ -0.37
ARHGEF39-204ENST00000488918 C9orf50Q5SZB4 431 aa12.73□□□□□ -0.37
ARHGEF39-204ENST00000488918 ZNF697Q5TEC3 545 aa12.73□□□□□ -0.37
ARHGEF39-204ENST00000488918 GDF6Q6KF10 455 aaPredicted RBP12.73□□□□□ -0.37
ARHGEF39-204ENST00000488918 GPR153Q6NV75 609 aa12.73□□□□□ -0.37
ARHGEF39-204ENST00000488918 ZNF365Q70YC5 407 aa12.73□□□□□ -0.37
ARHGEF39-204ENST00000488918 NIPA1Q7RTP0 329 aa12.73□□□□□ -0.37
ARHGEF39-204ENST00000488918 CKAP2LQ8IYA6 745 aa12.73□□□□□ -0.37
ARHGEF39-204ENST00000488918 BLIDQ8IZY5 108 aa12.73□□□□□ -0.37
ARHGEF39-204ENST00000488918 AFAP1L1Q8TED9 768 aa12.73□□□□□ -0.37
ARHGEF39-204ENST00000488918 KAT2BQ92831 832 aa12.73□□□□□ -0.37
ARHGEF39-204ENST00000488918 TBC1D22BQ9NU19 505 aa12.73□□□□□ -0.37
ARHGEF39-204ENST00000488918 PCDH10Q9P2E7 1040 aa12.73□□□□□ -0.37
ARHGEF39-204ENST00000488918 ORC3Q9UBD5 711 aaPredicted RBP12.73□□□□□ -0.37
ARHGEF39-204ENST00000488918 TPCN1Q9ULQ1 816 aa12.73□□□□□ -0.37
ARHGEF39-204ENST00000488918 TRPC6Q9Y210 931 aa12.73□□□□□ -0.37
ARHGEF39-204ENST00000488918 ST18O60284 1047 aa12.72□□□□□ -0.37
ARHGEF39-204ENST00000488918 SMIM10L2AP0DMW4 78 aa12.72□□□□□ -0.37
ARHGEF39-204ENST00000488918 SMIM10L2BP0DMW5 78 aa12.72□□□□□ -0.37
ARHGEF39-204ENST00000488918 HOXD8P13378 290 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF39-204ENST00000488918 SELPP16109 830 aa12.72□□□□□ -0.37
ARHGEF39-204ENST00000488918 KCNA2P16389 499 aa12.72□□□□□ -0.37
ARHGEF39-204ENST00000488918 THPOP40225 353 aa12.72□□□□□ -0.37
ARHGEF39-204ENST00000488918 CLK2P49760 499 aaKnown RBP12.72□□□□□ -0.37
ARHGEF39-204ENST00000488918 USP11P51784 963 aa12.72□□□□□ -0.37
ARHGEF39-204ENST00000488918 NONOQ15233 471 aaKnown RBP eCLIP12.72□□□□□ -0.37
ARHGEF39-204ENST00000488918 MIS18BP1Q6P0N0 1132 aa12.72□□□□□ -0.37
ARHGEF39-204ENST00000488918 OTOP2Q7RTS6 562 aa12.72□□□□□ -0.37
ARHGEF39-204ENST00000488918 KRT25Q7Z3Z0 450 aa12.72□□□□□ -0.37
ARHGEF39-204ENST00000488918 DEFB123Q8N688 67 aa12.72□□□□□ -0.37
ARHGEF39-204ENST00000488918 SCLYQ96I15 445 aa12.72□□□□□ -0.37
ARHGEF39-204ENST00000488918 LRCH3Q96II8 777 aa12.72□□□□□ -0.37
ARHGEF39-204ENST00000488918 ZSCAN31Q96LW9 406 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF39-204ENST00000488918 NAP1L4Q99733 375 aaKnown RBP12.72□□□□□ -0.37
ARHGEF39-204ENST00000488918 MSRAQ9UJ68 235 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms