RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 CHGBP05060 677 aa4.91□□□□□ -1.62
CCDC93-209ENST00000488908 SNRPB2P08579 225 aaKnown RBP4.91□□□□□ -1.62
CCDC93-209ENST00000488908 COL6A1P12109 1028 aa4.91□□□□□ -1.62
CCDC93-209ENST00000488908 ECI1P42126 302 aa4.91□□□□□ -1.62
CCDC93-209ENST00000488908 INHBEP58166 350 aa4.91□□□□□ -1.62
CCDC93-209ENST00000488908 NCAPHQ15003 741 aa4.91□□□□□ -1.62
CCDC93-209ENST00000488908 NRN1LQ496H8 165 aa4.91□□□□□ -1.62
CCDC93-209ENST00000488908 ACBD5Q5T8D3 534 aaPredicted RBP4.91□□□□□ -1.62
CCDC93-209ENST00000488908 TCTN3Q6NUS6 607 aa4.91□□□□□ -1.62
CCDC93-209ENST00000488908 Q6ZUG5 572 aa4.91□□□□□ -1.62
CCDC93-209ENST00000488908 IFNL2Q8IZJ0 200 aa4.91□□□□□ -1.62
CCDC93-209ENST00000488908 GIMAP8Q8ND71 665 aaPredicted RBP4.91□□□□□ -1.62
CCDC93-209ENST00000488908 RCBTB1Q8NDN9 531 aa4.91□□□□□ -1.62
CCDC93-209ENST00000488908 CPLX3Q8WVH0 158 aa4.91□□□□□ -1.62
CCDC93-209ENST00000488908 BTN2A2Q8WVV5 523 aa4.91□□□□□ -1.62
CCDC93-209ENST00000488908 GPRASP2Q96D09 838 aa4.91□□□□□ -1.62
CCDC93-209ENST00000488908 ZNF503Q96F45 646 aa4.91□□□□□ -1.62
CCDC93-209ENST00000488908 SHDQ96IW2 340 aa4.91□□□□□ -1.62
CCDC93-209ENST00000488908 GNRHR2Q96P88 292 aa4.91□□□□□ -1.62
CCDC93-209ENST00000488908 LMF1Q96S06 567 aa4.91□□□□□ -1.62
CCDC93-209ENST00000488908 EPB41L1Q9H4G0 881 aa4.91□□□□□ -1.62
CCDC93-209ENST00000488908 FBXL7Q9UJT9 491 aa4.91□□□□□ -1.62
CCDC93-209ENST00000488908 ZFR2Q9UPR6 939 aaKnown RBP4.91□□□□□ -1.62
CCDC93-209ENST00000488908 WASF3Q9UPY6 502 aa4.91□□□□□ -1.62
CCDC93-209ENST00000488908 PCDHA2Q9Y5H9 948 aa4.91□□□□□ -1.62
CCDC93-209ENST00000488908 SLC4A7Q9Y6M7 1214 aa4.91□□□□□ -1.62
CCDC93-209ENST00000488908 ZNF202O95125 648 aa4.9□□□□□ -1.63
CCDC93-209ENST00000488908 ZNF16P17020 682 aaPredicted RBP4.9□□□□□ -1.63
CCDC93-209ENST00000488908 LTBRP36941 435 aa4.9□□□□□ -1.63
CCDC93-209ENST00000488908 TESK1Q15569 626 aa4.9□□□□□ -1.63
CCDC93-209ENST00000488908 SMAD2Q15796 467 aaKnown RBP4.9□□□□□ -1.63
CCDC93-209ENST00000488908 VASNQ6EMK4 673 aa4.9□□□□□ -1.63
CCDC93-209ENST00000488908 TRIM48Q8IWZ4 208 aa4.9□□□□□ -1.63
CCDC93-209ENST00000488908 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.9□□□□□ -1.63
CCDC93-209ENST00000488908 CHFRQ96EP1 664 aa4.9□□□□□ -1.63
CCDC93-209ENST00000488908 LRRC37BQ96QE4 947 aa4.9□□□□□ -1.63
CCDC93-209ENST00000488908 LGR4Q9BXB1 951 aa4.9□□□□□ -1.63
CCDC93-209ENST00000488908 CSRNP2Q9H175 543 aa4.9□□□□□ -1.63
CCDC93-209ENST00000488908 SMOC1Q9H4F8 434 aa4.9□□□□□ -1.63
CCDC93-209ENST00000488908 DLL4Q9NR61 685 aa4.9□□□□□ -1.63
CCDC93-209ENST00000488908 CLDND1Q9NY35 253 aa4.9□□□□□ -1.63
CCDC93-209ENST00000488908 ARNTLO00327 626 aa4.89□□□□□ -1.63
CCDC93-209ENST00000488908 KRIT1O00522 736 aa4.89□□□□□ -1.63
CCDC93-209ENST00000488908 FBXO21O94952 628 aa4.89□□□□□ -1.63
CCDC93-209ENST00000488908 SCG5P05408 212 aa4.89□□□□□ -1.63
CCDC93-209ENST00000488908 USP39Q53GS9 565 aaKnown RBP4.89□□□□□ -1.63
CCDC93-209ENST00000488908 CYP4F22Q6NT55 531 aa4.89□□□□□ -1.63
CCDC93-209ENST00000488908 PPIL6Q8IXY8 311 aa4.89□□□□□ -1.63
CCDC93-209ENST00000488908 AMER2Q8N7J2 671 aa4.89□□□□□ -1.63
CCDC93-209ENST00000488908 DTX3Q8N9I9 347 aa4.89□□□□□ -1.63
CCDC93-209ENST00000488908 EDAQ92838 391 aa4.89□□□□□ -1.63
CCDC93-209ENST00000488908 AJUBAQ96IF1 538 aa4.89□□□□□ -1.63
CCDC93-209ENST00000488908 CCDC140Q96MF4 163 aa4.89□□□□□ -1.63
CCDC93-209ENST00000488908 RBPJLQ9UBG7 517 aa4.89□□□□□ -1.63
CCDC93-209ENST00000488908 COMTP21964 271 aa4.88□□□□□ -1.63
CCDC93-209ENST00000488908 CSF2RBP32927 897 aa4.88□□□□□ -1.63
CCDC93-209ENST00000488908 MCM7P33993 719 aa4.88□□□□□ -1.63
CCDC93-209ENST00000488908 NASPP49321 788 aaPredicted RBP4.88□□□□□ -1.63
CCDC93-209ENST00000488908 ZNF568Q3ZCX4 644 aa4.88□□□□□ -1.63
CCDC93-209ENST00000488908 TAX1BP1Q86VP1 789 aa4.88□□□□□ -1.63
CCDC93-209ENST00000488908 REXO1L1PQ8IX06 675 aa4.88□□□□□ -1.63
CCDC93-209ENST00000488908 KREMEN2Q8NCW0 462 aa4.88□□□□□ -1.63
CCDC93-209ENST00000488908 TTLL11Q8NHH1 800 aa4.88□□□□□ -1.63
CCDC93-209ENST00000488908 CEP89Q96ST8 783 aa4.88□□□□□ -1.63
CCDC93-209ENST00000488908 LRP2BPQ9P2M1 347 aa4.88□□□□□ -1.63
CCDC93-209ENST00000488908 ASH2LQ9UBL3 628 aa4.88□□□□□ -1.63
CCDC93-209ENST00000488908 TBX1O43435 398 aa4.87□□□□□ -1.63
CCDC93-209ENST00000488908 KNG1P01042 644 aa4.87□□□□□ -1.63
CCDC93-209ENST00000488908 LCP1P13796 627 aa4.87□□□□□ -1.63
CCDC93-209ENST00000488908 KCNJ6P48051 423 aa4.87□□□□□ -1.63
CCDC93-209ENST00000488908 PTH1RQ03431 593 aa4.87□□□□□ -1.63
CCDC93-209ENST00000488908 DPTQ07507 201 aa4.87□□□□□ -1.63
CCDC93-209ENST00000488908 PHF19Q5T6S3 580 aa4.87□□□□□ -1.63
CCDC93-209ENST00000488908 GPR155Q7Z3F1 870 aa4.87□□□□□ -1.63
CCDC93-209ENST00000488908 PROSER1Q86XN7 944 aa4.87□□□□□ -1.63
CCDC93-209ENST00000488908 FAM169BQ8N8A8 192 aa4.87□□□□□ -1.63
CCDC93-209ENST00000488908 TRIM8Q9BZR9 551 aa4.87□□□□□ -1.63
CCDC93-209ENST00000488908 NARSO43776 548 aaKnown RBP4.86□□□□□ -1.63
CCDC93-209ENST00000488908 ITGAVP06756 1048 aa4.86□□□□□ -1.63
CCDC93-209ENST00000488908 PRSS53Q2L4Q9 553 aa4.86□□□□□ -1.63
CCDC93-209ENST00000488908 LSM12Q3MHD2 195 aaKnown RBP4.86□□□□□ -1.63
CCDC93-209ENST00000488908 SV2CQ496J9 727 aa4.86□□□□□ -1.63
CCDC93-209ENST00000488908 AGBL4Q5VU57 503 aa4.86□□□□□ -1.63
CCDC93-209ENST00000488908 IGFL4Q6B9Z1 124 aa4.86□□□□□ -1.63
CCDC93-209ENST00000488908 ZNF227Q86WZ6 799 aa4.86□□□□□ -1.63
CCDC93-209ENST00000488908 ZNF575Q86XF7 245 aa4.86□□□□□ -1.63
CCDC93-209ENST00000488908 NEIL1Q96FI4 390 aaPredicted RBP4.86□□□□□ -1.63
CCDC93-209ENST00000488908 KATNBL1Q9H079 304 aa4.86□□□□□ -1.63
CCDC93-209ENST00000488908 SLC6A20Q9NP91 592 aa4.86□□□□□ -1.63
CCDC93-209ENST00000488908 ZFP69BQ9UJL9 534 aa4.86□□□□□ -1.63
CCDC93-209ENST00000488908 SCAMP3O14828 347 aaKnown RBP4.85□□□□□ -1.63
CCDC93-209ENST00000488908 TGM1P22735 817 aa4.85□□□□□ -1.63
CCDC93-209ENST00000488908 GJA8P48165 433 aa4.85□□□□□ -1.63
CCDC93-209ENST00000488908 GFRA1P56159 465 aa4.85□□□□□ -1.63
CCDC93-209ENST00000488908 RAC3P60763 192 aa4.85□□□□□ -1.63
CCDC93-209ENST00000488908 GRIN1Q05586 938 aa4.85□□□□□ -1.63
CCDC93-209ENST00000488908 USP10Q14694 798 aaKnown RBP4.85□□□□□ -1.63
CCDC93-209ENST00000488908 SF1Q15637 639 aaKnown RBP4.85□□□□□ -1.63
CCDC93-209ENST00000488908 FUKQ8N0W3 1084 aa4.85□□□□□ -1.63
CCDC93-209ENST00000488908 EXTL1Q92935 676 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms