RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 DEFB103AP81534 67 aa29.97■■■□□ 2.39
RNF220-216ENST00000488865 MBTPS1Q14703 1052 aa29.97■■■□□ 2.39
RNF220-216ENST00000488865 XRRA1Q6P2D8 792 aa29.97■■■□□ 2.39
RNF220-216ENST00000488865 SMARCC2Q8TAQ2 1214 aa29.97■■■□□ 2.39
RNF220-216ENST00000488865 LSG1Q9H089 658 aaKnown RBP29.97■■■□□ 2.39
RNF220-216ENST00000488865 BCAS3Q9H6U6 928 aa29.97■■■□□ 2.39
RNF220-216ENST00000488865 C17orf102A2RUQ5 167 aa29.96■■■□□ 2.39
RNF220-216ENST00000488865 SEMA3FQ13275 785 aa29.96■■■□□ 2.39
RNF220-216ENST00000488865 TCTN1Q2MV58 587 aa29.96■■■□□ 2.39
RNF220-216ENST00000488865 PCNX4Q63HM2 1172 aa29.96■■■□□ 2.39
RNF220-216ENST00000488865 RTEL1Q9NZ71 1219 aa29.96■■■□□ 2.39
RNF220-216ENST00000488865 PRRC2BQ5JSZ5 2229 aaKnown RBP29.96■■■□□ 2.39
RNF220-216ENST00000488865 SH2B2O14492 632 aaPredicted RBP29.95■■■□□ 2.39
RNF220-216ENST00000488865 LGR5O75473 907 aa29.95■■■□□ 2.39
RNF220-216ENST00000488865 GJB5O95377 273 aa29.95■■■□□ 2.39
RNF220-216ENST00000488865 USP17L6PQ6QN14 398 aa29.95■■■□□ 2.39
RNF220-216ENST00000488865 NFXL1Q6ZNB6 911 aa29.95■■■□□ 2.39
RNF220-216ENST00000488865 CYFIP1Q7L576 1253 aa29.95■■■□□ 2.39
RNF220-216ENST00000488865 IL27Q8NEV9 243 aa29.95■■■□□ 2.39
RNF220-216ENST00000488865 ADAMTS19Q8TE59 1207 aa29.95■■■□□ 2.39
RNF220-216ENST00000488865 ATP6V0A1Q93050 837 aa29.95■■■□□ 2.39
RNF220-216ENST00000488865 RAD9AQ99638 391 aa29.95■■■□□ 2.39
RNF220-216ENST00000488865 SENP7Q9BQF6 1050 aa29.95■■■□□ 2.39
RNF220-216ENST00000488865 LCHNA4D1U4 455 aa29.94■■■□□ 2.38
RNF220-216ENST00000488865 CCDC69A6NI79 296 aa29.94■■■□□ 2.38
RNF220-216ENST00000488865 RSPH10B2B2RC85 870 aa29.94■■■□□ 2.38
RNF220-216ENST00000488865 MEIS2O14770 477 aa29.94■■■□□ 2.38
RNF220-216ENST00000488865 RSPH10BP0C881 870 aa29.94■■■□□ 2.38
RNF220-216ENST00000488865 SMIM10L2AP0DMW4 78 aa29.94■■■□□ 2.38
RNF220-216ENST00000488865 SMIM10L2BP0DMW5 78 aa29.94■■■□□ 2.38
RNF220-216ENST00000488865 THPOP40225 353 aa29.94■■■□□ 2.38
RNF220-216ENST00000488865 LIFRP42702 1097 aa29.94■■■□□ 2.38
RNF220-216ENST00000488865 TMCO2Q7Z6W1 182 aaPredicted RBP29.94■■■□□ 2.38
RNF220-216ENST00000488865 GPR20Q99678 358 aa29.94■■■□□ 2.38
RNF220-216ENST00000488865 SLC27A2O14975 620 aa29.93■■■□□ 2.38
RNF220-216ENST00000488865 CALM1P0DP23 149 aa29.93■■■□□ 2.38
RNF220-216ENST00000488865 CALM2P0DP24 149 aa29.93■■■□□ 2.38
RNF220-216ENST00000488865 CALM3P0DP25 149 aa29.93■■■□□ 2.38
RNF220-216ENST00000488865 AAK1Q2M2I8 961 aa29.93■■■□□ 2.38
RNF220-216ENST00000488865 SRBD1Q8N5C6 995 aaKnown RBP29.93■■■□□ 2.38
RNF220-216ENST00000488865 ESYT1Q9BSJ8 1104 aa29.93■■■□□ 2.38
RNF220-216ENST00000488865 RNPEPQ9H4A4 650 aa29.93■■■□□ 2.38
RNF220-216ENST00000488865 CAND2O75155 1236 aa29.92■■■□□ 2.38
RNF220-216ENST00000488865 PLEKHA8P1O95397 391 aa29.92■■■□□ 2.38
RNF220-216ENST00000488865 GNAT1P11488 350 aa29.92■■■□□ 2.38
RNF220-216ENST00000488865 GRB10Q13322 594 aa29.92■■■□□ 2.38
RNF220-216ENST00000488865 SKIV2LQ15477 1246 aaKnown RBP29.92■■■□□ 2.38
RNF220-216ENST00000488865 NECTIN1Q15223 517 aa29.91■■■□□ 2.38
RNF220-216ENST00000488865 NLRX1Q86UT6 975 aa29.91■■■□□ 2.38
RNF220-216ENST00000488865 GIMAP8Q8ND71 665 aaPredicted RBP29.91■■■□□ 2.38
RNF220-216ENST00000488865 ZNF215Q9UL58 517 aaPredicted RBP29.91■■■□□ 2.38
RNF220-216ENST00000488865 TREHO43280 583 aa29.9■■■□□ 2.38
RNF220-216ENST00000488865 LPXNO60711 386 aa29.9■■■□□ 2.38
RNF220-216ENST00000488865 MKRN4PQ13434 485 aaPredicted RBP29.9■■■□□ 2.38
RNF220-216ENST00000488865 PLEKHG4Q58EX7 1191 aa29.9■■■□□ 2.38
RNF220-216ENST00000488865 CREB3L3Q68CJ9 461 aa29.9■■■□□ 2.38
RNF220-216ENST00000488865 KRT40Q6A162 431 aa29.9■■■□□ 2.38
RNF220-216ENST00000488865 SPRED2Q7Z698 418 aa29.9■■■□□ 2.38
RNF220-216ENST00000488865 DBF4BQ8NFT6 615 aa29.9■■■□□ 2.38
RNF220-216ENST00000488865 UHRF1Q96T88 793 aaPredicted RBP29.9■■■□□ 2.38
RNF220-216ENST00000488865 PSTPIP2Q9H939 334 aa29.9■■■□□ 2.38
RNF220-216ENST00000488865 LMCD1Q9NZU5 365 aa29.9■■■□□ 2.38
RNF220-216ENST00000488865 COG5Q9UP83 839 aa29.9■■■□□ 2.38
RNF220-216ENST00000488865 DOCK5Q9H7D0 1870 aa29.89■■■□□ 2.38
RNF220-216ENST00000488865 SLC12A7Q9Y666 1083 aa29.89■■■□□ 2.38
RNF220-216ENST00000488865 BMP1P13497 986 aa29.88■■■□□ 2.37
RNF220-216ENST00000488865 ERVK-21P61565 698 aa29.88■■■□□ 2.37
RNF220-216ENST00000488865 TFF2Q03403 129 aa29.88■■■□□ 2.37
RNF220-216ENST00000488865 COL9A3Q14050 684 aaPredicted RBP29.88■■■□□ 2.37
RNF220-216ENST00000488865 CMTR1Q8N1G2 835 aaKnown RBP29.88■■■□□ 2.37
RNF220-216ENST00000488865 GPRASP2Q96D09 838 aa29.88■■■□□ 2.37
RNF220-216ENST00000488865 CDHR1Q96JP9 859 aa29.88■■■□□ 2.37
RNF220-216ENST00000488865 TGS1Q96RS0 853 aaKnown RBP29.88■■■□□ 2.37
RNF220-216ENST00000488865 AMHP03971 560 aa29.87■■■□□ 2.37
RNF220-216ENST00000488865 RXRAP19793 462 aa29.87■■■□□ 2.37
RNF220-216ENST00000488865 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.87■■■□□ 2.37
RNF220-216ENST00000488865 SGMS1Q86VZ5 419 aa29.87■■■□□ 2.37
RNF220-216ENST00000488865 SETD4Q9NVD3 440 aa29.87■■■□□ 2.37
RNF220-216ENST00000488865 INSL6Q9Y581 213 aa29.87■■■□□ 2.37
RNF220-216ENST00000488865 COL4A4P53420 1690 aaPredicted RBP29.86■■■□□ 2.37
RNF220-216ENST00000488865 LINC01553A4QN01 128 aa29.86■■■□□ 2.37
RNF220-216ENST00000488865 ADAM17P78536 824 aa29.86■■■□□ 2.37
RNF220-216ENST00000488865 UTP14CQ5TAP6 766 aaKnown RBP29.86■■■□□ 2.37
RNF220-216ENST00000488865 TRIM50Q86XT4 487 aa29.86■■■□□ 2.37
RNF220-216ENST00000488865 FANCBQ8NB91 859 aa29.86■■■□□ 2.37
RNF220-216ENST00000488865 ANO2Q9NQ90 1003 aa29.86■■■□□ 2.37
RNF220-216ENST00000488865 NCOR1O75376 2440 aa29.86■■■□□ 2.37
RNF220-216ENST00000488865 MICAL3Q7RTP6 2002 aa29.86■■■□□ 2.37
RNF220-216ENST00000488865 FAM117BQ6P1L5 589 aa29.85■■■□□ 2.37
RNF220-216ENST00000488865 TMTC3Q6ZXV5 915 aa29.85■■■□□ 2.37
RNF220-216ENST00000488865 SEPT8Q92599 483 aa29.85■■■□□ 2.37
RNF220-216ENST00000488865 SUGCTQ9HAC7 445 aa29.85■■■□□ 2.37
RNF220-216ENST00000488865 TELO2Q9Y4R8 837 aa29.85■■■□□ 2.37
RNF220-216ENST00000488865 NRCAMQ92823 1304 aa29.85■■■□□ 2.37
RNF220-216ENST00000488865 SP4Q02446 784 aa29.84■■■□□ 2.37
RNF220-216ENST00000488865 ATP9AO75110 1047 aa29.83■■■□□ 2.37
RNF220-216ENST00000488865 KCNA2P16389 499 aa29.83■■■□□ 2.37
RNF220-216ENST00000488865 ITGB5P18084 799 aa29.83■■■□□ 2.37
RNF220-216ENST00000488865 HTRA4P83105 476 aaPredicted RBP29.83■■■□□ 2.37
RNF220-216ENST00000488865 BMP2KLQ5H9B9 411 aa29.83■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms