RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 EPSTI1Q96J88 318 aa12.05□□□□□ -0.48
USP11-209ENST00000488848 HSD17B14Q9BPX1 270 aa12.05□□□□□ -0.48
USP11-209ENST00000488848 KATNBL1Q9H079 304 aa12.05□□□□□ -0.48
USP11-209ENST00000488848 NT5C3AQ9H0P0 336 aa12.05□□□□□ -0.48
USP11-209ENST00000488848 NUP62CLQ9H1M0 184 aa12.05□□□□□ -0.48
USP11-209ENST00000488848 LRWD1Q9UFC0 647 aa12.05□□□□□ -0.48
USP11-209ENST00000488848 IVNS1ABPQ9Y6Y0 642 aa12.05□□□□□ -0.48
USP11-209ENST00000488848 WDR81Q562E7 1941 aa12.05□□□□□ -0.48
USP11-209ENST00000488848 COBLO75128 1261 aa12.04□□□□□ -0.48
USP11-209ENST00000488848 ARP10275 920 aa12.04□□□□□ -0.48
USP11-209ENST00000488848 SFNP31947 248 aa12.04□□□□□ -0.48
USP11-209ENST00000488848 TECP42680 631 aa12.04□□□□□ -0.48
USP11-209ENST00000488848 TXKP42681 527 aa12.04□□□□□ -0.48
USP11-209ENST00000488848 KRT76Q01546 638 aa12.04□□□□□ -0.48
USP11-209ENST00000488848 ZSCAN23Q3MJ62 389 aa12.04□□□□□ -0.48
USP11-209ENST00000488848 LRCH2Q5VUJ6 765 aa12.04□□□□□ -0.48
USP11-209ENST00000488848 OLFML2BQ68BL8 750 aa12.04□□□□□ -0.48
USP11-209ENST00000488848 ZNF746Q6NUN9 644 aaPredicted RBP12.04□□□□□ -0.48
USP11-209ENST00000488848 GIMAP8Q8ND71 665 aaPredicted RBP12.04□□□□□ -0.48
USP11-209ENST00000488848 CCDC34Q96HJ3 373 aa12.04□□□□□ -0.48
USP11-209ENST00000488848 PURBQ96QR8 312 aaKnown RBP12.04□□□□□ -0.48
USP11-209ENST00000488848 ZNF577Q9BSK1 485 aa12.04□□□□□ -0.48
USP11-209ENST00000488848 FUCA2Q9BTY2 467 aa12.04□□□□□ -0.48
USP11-209ENST00000488848 VTA1Q9NP79 307 aa12.04□□□□□ -0.48
USP11-209ENST00000488848 KBTBD4Q9NVX7 518 aa12.04□□□□□ -0.48
USP11-209ENST00000488848 SLC5A4Q9NY91 659 aa12.04□□□□□ -0.48
USP11-209ENST00000488848 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.04□□□□□ -0.48
USP11-209ENST00000488848 CCDC39Q9UFE4 941 aa12.04□□□□□ -0.48
USP11-209ENST00000488848 NRBP1Q9UHY1 535 aa12.04□□□□□ -0.48
USP11-209ENST00000488848 TUBE1Q9UJT0 475 aa12.04□□□□□ -0.48
USP11-209ENST00000488848 GJD2Q9UKL4 321 aa12.04□□□□□ -0.48
USP11-209ENST00000488848 HTTP42858 3142 aa12.03□□□□□ -0.48
USP11-209ENST00000488848 POTEMA6NI47 508 aa12.03□□□□□ -0.48
USP11-209ENST00000488848 POLR2DO15514 142 aaKnown RBP12.03□□□□□ -0.48
USP11-209ENST00000488848 GAS7O60861 476 aa12.03□□□□□ -0.48
USP11-209ENST00000488848 XRCC5P13010 732 aaKnown RBP12.03□□□□□ -0.48
USP11-209ENST00000488848 JAK3P52333 1124 aa12.03□□□□□ -0.48
USP11-209ENST00000488848 UBXN2AP68543 259 aa12.03□□□□□ -0.48
USP11-209ENST00000488848 MAP2K5Q13163 448 aa12.03□□□□□ -0.48
USP11-209ENST00000488848 EPHA7Q15375 998 aa12.03□□□□□ -0.48
USP11-209ENST00000488848 LONRF3Q496Y0 759 aa12.03□□□□□ -0.48
USP11-209ENST00000488848 KRT79Q5XKE5 535 aa12.03□□□□□ -0.48
USP11-209ENST00000488848 CCDC62Q6P9F0 684 aa12.03□□□□□ -0.48
USP11-209ENST00000488848 CABP7Q86V35 215 aa12.03□□□□□ -0.48
USP11-209ENST00000488848 SMAP1Q8IYB5 467 aaPredicted RBP12.03□□□□□ -0.48
USP11-209ENST00000488848 ERMNQ8TAM6 284 aa12.03□□□□□ -0.48
USP11-209ENST00000488848 EMID1Q96A84 441 aaPredicted RBP12.03□□□□□ -0.48
USP11-209ENST00000488848 MAML3Q96JK9 1138 aa12.03□□□□□ -0.48
USP11-209ENST00000488848 PNMA5Q96PV4 448 aa12.03□□□□□ -0.48
USP11-209ENST00000488848 TEKT3Q9BXF9 490 aa12.03□□□□□ -0.48
USP11-209ENST00000488848 TNMDQ9H2S6 317 aa12.03□□□□□ -0.48
USP11-209ENST00000488848 TUFT1Q9NNX1 390 aa12.03□□□□□ -0.48
USP11-209ENST00000488848 CPA4Q9UI42 421 aa12.03□□□□□ -0.48
USP11-209ENST00000488848 AOC2O75106 756 aa12.02□□□□□ -0.49
USP11-209ENST00000488848 ATG7O95352 703 aa12.02□□□□□ -0.49
USP11-209ENST00000488848 PGK2P07205 417 aa12.02□□□□□ -0.49
USP11-209ENST00000488848 SPATA31C1P0DKV0 1188 aa12.02□□□□□ -0.49
USP11-209ENST00000488848 VEGFBP49765 207 aa12.02□□□□□ -0.49
USP11-209ENST00000488848 LACTBP83111 547 aaPredicted RBP12.02□□□□□ -0.49
USP11-209ENST00000488848 PDE4DQ08499 809 aa12.02□□□□□ -0.49
USP11-209ENST00000488848 GRB10Q13322 594 aa12.02□□□□□ -0.49
USP11-209ENST00000488848 CALML4Q96GE6 196 aa12.02□□□□□ -0.49
USP11-209ENST00000488848 HOOK1Q9UJC3 728 aaKnown RBP12.02□□□□□ -0.49
USP11-209ENST00000488848 IGKV6D-21A0A0A0MT36 114 aa12.01□□□□□ -0.49
USP11-209ENST00000488848 PP2D1A8MPX8 630 aa12.01□□□□□ -0.49
USP11-209ENST00000488848 WDR64B1ANS9 1081 aa12.01□□□□□ -0.49
USP11-209ENST00000488848 ATP9AO75110 1047 aa12.01□□□□□ -0.49
USP11-209ENST00000488848 CAVIN2O95810 425 aa12.01□□□□□ -0.49
USP11-209ENST00000488848 GNRH1P01148 92 aa12.01□□□□□ -0.49
USP11-209ENST00000488848 MYCLP12524 364 aaPredicted RBP12.01□□□□□ -0.49
USP11-209ENST00000488848 PLCG1P19174 1290 aa12.01□□□□□ -0.49
USP11-209ENST00000488848 SARSP49591 514 aaKnown RBP12.01□□□□□ -0.49
USP11-209ENST00000488848 NEDD9Q14511 834 aa12.01□□□□□ -0.49
USP11-209ENST00000488848 KARSQ15046 597 aaKnown RBP12.01□□□□□ -0.49
USP11-209ENST00000488848 SPECC1Q5M775 1068 aa12.01□□□□□ -0.49
USP11-209ENST00000488848 METTL7BQ6UX53 244 aa12.01□□□□□ -0.49
USP11-209ENST00000488848 ARMCX2Q7L311 632 aa12.01□□□□□ -0.49
USP11-209ENST00000488848 CNNM3Q8NE01 707 aa12.01□□□□□ -0.49
USP11-209ENST00000488848 SNX29Q8TEQ0 813 aa12.01□□□□□ -0.49
USP11-209ENST00000488848 LRRC15Q8TF66 581 aa12.01□□□□□ -0.49
USP11-209ENST00000488848 SCFD2Q8WU76 684 aa12.01□□□□□ -0.49
USP11-209ENST00000488848 MTRQ99707 1265 aa12.01□□□□□ -0.49
USP11-209ENST00000488848 APBA2Q99767 749 aa12.01□□□□□ -0.49
USP11-209ENST00000488848 TINF2Q9BSI4 451 aa12.01□□□□□ -0.49
USP11-209ENST00000488848 UNC45AQ9H3U1 944 aa12.01□□□□□ -0.49
USP11-209ENST00000488848 BLOC1S4Q9NUP1 217 aa12.01□□□□□ -0.49
USP11-209ENST00000488848 KIAA1468Q9P260 1216 aa12.01□□□□□ -0.49
USP11-209ENST00000488848 EML1O00423 815 aa12□□□□□ -0.49
USP11-209ENST00000488848 CCNE2O96020 404 aa12□□□□□ -0.49
USP11-209ENST00000488848 XRCC6P12956 609 aaKnown RBP eCLIP12□□□□□ -0.49
USP11-209ENST00000488848 HOXD8P13378 290 aaPredicted RBP12□□□□□ -0.49
USP11-209ENST00000488848 UBA1P22314 1058 aaKnown RBP12□□□□□ -0.49
USP11-209ENST00000488848 RGS2P41220 211 aa12□□□□□ -0.49
USP11-209ENST00000488848 FCGRTP55899 365 aa12□□□□□ -0.49
USP11-209ENST00000488848 POSTNQ15063 836 aa12□□□□□ -0.49
USP11-209ENST00000488848 RRAGBQ5VZM2 374 aa12□□□□□ -0.49
USP11-209ENST00000488848 TAPT1Q6NXT6 567 aa12□□□□□ -0.49
USP11-209ENST00000488848 LRSAM1Q6UWE0 723 aa12□□□□□ -0.49
USP11-209ENST00000488848 CATSPER3Q86XQ3 398 aa12□□□□□ -0.49
USP11-209ENST00000488848 TRMT44Q8IYL2 757 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms