RNA–Protein interactions for RNA: ENST00000488828.1

NUP98-212, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-212ENST00000488828 LAMC2Q13753 1193 aa12.6□□□□□ -0.39
NUP98-212ENST00000488828 CCDC62Q6P9F0 684 aa12.6□□□□□ -0.39
NUP98-212ENST00000488828 ZNF687Q8N1G0 1237 aa12.6□□□□□ -0.39
NUP98-212ENST00000488828 REXO1Q8N1G1 1221 aaKnown RBP12.6□□□□□ -0.39
NUP98-212ENST00000488828 AFG1LQ8WV93 481 aa12.6□□□□□ -0.39
NUP98-212ENST00000488828 WASF1Q92558 559 aa12.6□□□□□ -0.39
NUP98-212ENST00000488828 ZSCAN31Q96LW9 406 aaPredicted RBP12.6□□□□□ -0.39
NUP98-212ENST00000488828 KIF2CQ99661 725 aa12.6□□□□□ -0.39
NUP98-212ENST00000488828 ZMYND12Q9H0C1 365 aa12.6□□□□□ -0.39
NUP98-212ENST00000488828 SH3GLB2Q9NR46 395 aa12.6□□□□□ -0.39
NUP98-212ENST00000488828 POLR3EQ9NVU0 708 aa12.6□□□□□ -0.39
NUP98-212ENST00000488828 PCDH10Q9P2E7 1040 aa12.6□□□□□ -0.39
NUP98-212ENST00000488828 PRKAG2Q9UGJ0 569 aa12.6□□□□□ -0.39
NUP98-212ENST00000488828 PQBP1O60828 265 aaKnown RBP12.59□□□□□ -0.39
NUP98-212ENST00000488828 CABYRO75952 493 aa12.59□□□□□ -0.39
NUP98-212ENST00000488828 RGS20O76081 388 aa12.59□□□□□ -0.39
NUP98-212ENST00000488828 LARGE1O95461 756 aa12.59□□□□□ -0.39
NUP98-212ENST00000488828 GGPS1O95749 300 aa12.59□□□□□ -0.39
NUP98-212ENST00000488828 CST5P28325 142 aaPredicted RBP12.59□□□□□ -0.39
NUP98-212ENST00000488828 RTP1P59025 263 aa12.59□□□□□ -0.39
NUP98-212ENST00000488828 AP3B2Q13367 1082 aa12.59□□□□□ -0.39
NUP98-212ENST00000488828 MCTP2Q6DN12 878 aa12.59□□□□□ -0.39
NUP98-212ENST00000488828 CCSAPQ6IQ19 270 aaPredicted RBP12.59□□□□□ -0.39
NUP98-212ENST00000488828 TEX2Q8IWB9 1127 aa12.59□□□□□ -0.39
NUP98-212ENST00000488828 GTF3C6Q969F1 213 aa12.59□□□□□ -0.39
NUP98-212ENST00000488828 AIFM3Q96NN9 605 aa12.59□□□□□ -0.39
NUP98-212ENST00000488828 ANO3Q9BYT9 981 aa12.59□□□□□ -0.39
NUP98-212ENST00000488828 BACH2Q9BYV9 841 aa12.59□□□□□ -0.39
NUP98-212ENST00000488828 PRDM5Q9NQX1 630 aaPredicted RBP12.59□□□□□ -0.39
NUP98-212ENST00000488828 PKD2L1Q9P0L9 805 aa12.59□□□□□ -0.39
NUP98-212ENST00000488828 ZMYND8Q9ULU4 1186 aaPredicted RBP12.59□□□□□ -0.39
NUP98-212ENST00000488828 ESYT2A0FGR8 921 aa12.58□□□□□ -0.4
NUP98-212ENST00000488828 DCDC2CA8MYV0 355 aa12.58□□□□□ -0.4
NUP98-212ENST00000488828 SPATA31C2B4DYI2 1134 aa12.58□□□□□ -0.4
NUP98-212ENST00000488828 NOP56O00567 594 aaKnown RBP12.58□□□□□ -0.4
NUP98-212ENST00000488828 CTAGE5O15320 804 aa12.58□□□□□ -0.4
NUP98-212ENST00000488828 FIBPO43427 364 aa12.58□□□□□ -0.4
NUP98-212ENST00000488828 KPNA6O60684 536 aa12.58□□□□□ -0.4
NUP98-212ENST00000488828 SYN1P17600 705 aa12.58□□□□□ -0.4
NUP98-212ENST00000488828 FOSBP53539 338 aa12.58□□□□□ -0.4
NUP98-212ENST00000488828 SP2Q02086 613 aa12.58□□□□□ -0.4
NUP98-212ENST00000488828 SP4Q02446 784 aa12.58□□□□□ -0.4
NUP98-212ENST00000488828 TLE2Q04725 743 aa12.58□□□□□ -0.4
NUP98-212ENST00000488828 MTMR1Q13613 665 aa12.58□□□□□ -0.4
NUP98-212ENST00000488828 TRIM29Q14134 588 aa12.58□□□□□ -0.4
NUP98-212ENST00000488828 NEDD9Q14511 834 aa12.58□□□□□ -0.4
NUP98-212ENST00000488828 TRIM60Q495X7 471 aa12.58□□□□□ -0.4
NUP98-212ENST00000488828 CCDC83Q8IWF9 413 aa12.58□□□□□ -0.4
NUP98-212ENST00000488828 ZNF454Q8N9F8 522 aa12.58□□□□□ -0.4
NUP98-212ENST00000488828 RASGRP4Q8TDF6 673 aa12.58□□□□□ -0.4
NUP98-212ENST00000488828 CDHR1Q96JP9 859 aa12.58□□□□□ -0.4
NUP98-212ENST00000488828 SPATA33Q96N06 139 aa12.58□□□□□ -0.4
NUP98-212ENST00000488828 ALG1Q9BT22 464 aa12.58□□□□□ -0.4
NUP98-212ENST00000488828 KCNJ14Q9UNX9 436 aa12.58□□□□□ -0.4
NUP98-212ENST00000488828 BRCA2P51587 3418 aa12.58□□□□□ -0.4
NUP98-212ENST00000488828 LCTP09848 1927 aa12.58□□□□□ -0.4
NUP98-212ENST00000488828 ELP1O95163 1332 aa12.58□□□□□ -0.4
NUP98-212ENST00000488828 TNRC18O15417 2968 aaPredicted RBP12.57□□□□□ -0.4
NUP98-212ENST00000488828 A0A0U1RQG5 324 aaPredicted RBP12.57□□□□□ -0.4
NUP98-212ENST00000488828 GRXCR2A6NFK2 248 aa12.57□□□□□ -0.4
NUP98-212ENST00000488828 A6NJR5 290 aa12.57□□□□□ -0.4
NUP98-212ENST00000488828 CTDNEP1O95476 244 aa12.57□□□□□ -0.4
NUP98-212ENST00000488828 PSMC6P62333 389 aa12.57□□□□□ -0.4
NUP98-212ENST00000488828 ARHGAP4P98171 946 aa12.57□□□□□ -0.4
NUP98-212ENST00000488828 ARHGAP1Q07960 439 aa12.57□□□□□ -0.4
NUP98-212ENST00000488828 ITGA7Q13683 1181 aa12.57□□□□□ -0.4
NUP98-212ENST00000488828 DGKDQ16760 1214 aa12.57□□□□□ -0.4
NUP98-212ENST00000488828 FAM47CQ5HY64 1035 aa12.57□□□□□ -0.4
NUP98-212ENST00000488828 CELF3Q5SZQ8 465 aaKnown RBP12.57□□□□□ -0.4
NUP98-212ENST00000488828 MYSM1Q5VVJ2 828 aa12.57□□□□□ -0.4
NUP98-212ENST00000488828 CYFIP1Q7L576 1253 aa12.57□□□□□ -0.4
NUP98-212ENST00000488828 BLIDQ8IZY5 108 aa12.57□□□□□ -0.4
NUP98-212ENST00000488828 GIMAP8Q8ND71 665 aaPredicted RBP12.57□□□□□ -0.4
NUP98-212ENST00000488828 TBC1D32Q96NH3 1257 aa12.57□□□□□ -0.4
NUP98-212ENST00000488828 INPP4AQ96PE3 977 aaPredicted RBP12.57□□□□□ -0.4
NUP98-212ENST00000488828 MTG1Q9BT17 334 aaPredicted RBP12.57□□□□□ -0.4
NUP98-212ENST00000488828 SH2B1Q9NRF2 756 aaPredicted RBP12.57□□□□□ -0.4
NUP98-212ENST00000488828 PCDHA4Q9UN74 947 aa12.57□□□□□ -0.4
NUP98-212ENST00000488828 FRMPD4Q14CM0 1322 aa12.57□□□□□ -0.4
NUP98-212ENST00000488828 ARVCFO00192 962 aa12.56□□□□□ -0.4
NUP98-212ENST00000488828 ADAMTS3O15072 1205 aa12.56□□□□□ -0.4
NUP98-212ENST00000488828 TLR3O15455 904 aaKnown RBP12.56□□□□□ -0.4
NUP98-212ENST00000488828 JAK2O60674 1132 aa12.56□□□□□ -0.4
NUP98-212ENST00000488828 ITGB5P18084 799 aa12.56□□□□□ -0.4
NUP98-212ENST00000488828 UBA1P22314 1058 aaKnown RBP12.56□□□□□ -0.4
NUP98-212ENST00000488828 ICAM3P32942 547 aa12.56□□□□□ -0.4
NUP98-212ENST00000488828 CLK2P49760 499 aaKnown RBP12.56□□□□□ -0.4
NUP98-212ENST00000488828 NKX3-2P78367 333 aa12.56□□□□□ -0.4
NUP98-212ENST00000488828 CEP55Q53EZ4 464 aa12.56□□□□□ -0.4
NUP98-212ENST00000488828 PRPF38BQ5VTL8 546 aaKnown RBP12.56□□□□□ -0.4
NUP98-212ENST00000488828 GALNT17Q6IS24 598 aa12.56□□□□□ -0.4
NUP98-212ENST00000488828 NSUN7Q8NE18 718 aaKnown RBP12.56□□□□□ -0.4
NUP98-212ENST00000488828 CYP2W1Q8TAV3 490 aa12.56□□□□□ -0.4
NUP98-212ENST00000488828 GPRASP2Q96D09 838 aa12.56□□□□□ -0.4
NUP98-212ENST00000488828 LBHD1Q9BQE6 289 aaPredicted RBP12.56□□□□□ -0.4
NUP98-212ENST00000488828 MXRA8Q9BRK3 442 aa12.56□□□□□ -0.4
NUP98-212ENST00000488828 BCAS3Q9H6U6 928 aa12.56□□□□□ -0.4
NUP98-212ENST00000488828 JADE2Q9NQC1 790 aa12.56□□□□□ -0.4
NUP98-212ENST00000488828 GJB4Q9NTQ9 266 aa12.56□□□□□ -0.4
NUP98-212ENST00000488828 TMEM39AQ9NV64 488 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms