RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 TRAF5O00463 557 aa15.73■□□□□ 0.11
ABCB1-207ENST00000488737 PLEKP08567 350 aaPredicted RBP15.73■□□□□ 0.11
ABCB1-207ENST00000488737 BAG6P46379 1132 aa15.73■□□□□ 0.11
ABCB1-207ENST00000488737 CASP8Q14790 479 aa15.73■□□□□ 0.11
ABCB1-207ENST00000488737 CCDC40Q4G0X9 1142 aa15.73■□□□□ 0.11
ABCB1-207ENST00000488737 STRIP1Q5VSL9 837 aa15.73■□□□□ 0.11
ABCB1-207ENST00000488737 TATDN1Q6P1N9 297 aa15.73■□□□□ 0.11
ABCB1-207ENST00000488737 RRAGAQ7L523 313 aa15.73■□□□□ 0.11
ABCB1-207ENST00000488737 DEFB132Q7Z7B7 95 aa15.73■□□□□ 0.11
ABCB1-207ENST00000488737 GLIS3Q8NEA6 775 aa15.73■□□□□ 0.11
ABCB1-207ENST00000488737 CRYGNQ8WXF5 182 aa15.73■□□□□ 0.11
ABCB1-207ENST00000488737 FAM184BQ9ULE4 1060 aa15.73■□□□□ 0.11
ABCB1-207ENST00000488737 KIAA1024Q9UPX6 916 aa15.73■□□□□ 0.11
ABCB1-207ENST00000488737 USP17L15C9J2P7 530 aa15.72■□□□□ 0.11
ABCB1-207ENST00000488737 USP17L13C9JLJ4 530 aa15.72■□□□□ 0.11
ABCB1-207ENST00000488737 USP17L11C9JVI0 530 aa15.72■□□□□ 0.11
ABCB1-207ENST00000488737 USP17L18D6R9N7 530 aa15.72■□□□□ 0.11
ABCB1-207ENST00000488737 USP17L22D6RA61 530 aa15.72■□□□□ 0.11
ABCB1-207ENST00000488737 USP17L17D6RBQ6 530 aa15.72■□□□□ 0.11
ABCB1-207ENST00000488737 USP17L19D6RCP7 530 aa15.72■□□□□ 0.11
ABCB1-207ENST00000488737 USP17L20D6RJB6 530 aa15.72■□□□□ 0.11
ABCB1-207ENST00000488737 H3BQF6 201 aa15.72■□□□□ 0.11
ABCB1-207ENST00000488737 RBAK-RBAKDNI3L0D1 243 aa15.72■□□□□ 0.11
ABCB1-207ENST00000488737 AKR1B10O60218 316 aa15.72■□□□□ 0.11
ABCB1-207ENST00000488737 USP17L24Q0WX57 530 aa15.72■□□□□ 0.11
ABCB1-207ENST00000488737 ASTE1Q2TB18 679 aaPredicted RBP15.72■□□□□ 0.11
ABCB1-207ENST00000488737 EDRF1Q3B7T1 1238 aa15.72■□□□□ 0.11
ABCB1-207ENST00000488737 Q4G0T1 1027 aa15.72■□□□□ 0.11
ABCB1-207ENST00000488737 USP17L6PQ6QN14 398 aa15.72■□□□□ 0.11
ABCB1-207ENST00000488737 TMEM179Q6ZVK1 233 aa15.72■□□□□ 0.11
ABCB1-207ENST00000488737 CACNA2D4Q7Z3S7 1137 aa15.72■□□□□ 0.11
ABCB1-207ENST00000488737 GPBP1Q86WP2 473 aa15.72■□□□□ 0.11
ABCB1-207ENST00000488737 ZFPM1Q8IX07 1006 aa15.72■□□□□ 0.11
ABCB1-207ENST00000488737 GMCL1P1Q8NEA9 526 aa15.72■□□□□ 0.11
ABCB1-207ENST00000488737 EXOC4Q96A65 974 aa15.72■□□□□ 0.11
ABCB1-207ENST00000488737 ALS2CR12Q96Q35 445 aa15.72■□□□□ 0.11
ABCB1-207ENST00000488737 PDE11AQ9HCR9 933 aa15.72■□□□□ 0.11
ABCB1-207ENST00000488737 SNX12Q9UMY4 172 aa15.72■□□□□ 0.11
ABCB1-207ENST00000488737 DUSP10Q9Y6W6 482 aa15.72■□□□□ 0.11
ABCB1-207ENST00000488737 SCN9AQ15858 1988 aa15.72■□□□□ 0.11
ABCB1-207ENST00000488737 E9PMD0 336 aa15.71■□□□□ 0.11
ABCB1-207ENST00000488737 MEIS2O14770 477 aa15.71■□□□□ 0.11
ABCB1-207ENST00000488737 SRGAP2O75044 1071 aa15.71■□□□□ 0.11
ABCB1-207ENST00000488737 FOSP01100 380 aaPredicted RBP15.71■□□□□ 0.11
ABCB1-207ENST00000488737 CYP11B2P19099 503 aa15.71■□□□□ 0.11
ABCB1-207ENST00000488737 KCNMA1Q12791 1236 aa15.71■□□□□ 0.11
ABCB1-207ENST00000488737 KRT26Q7Z3Y9 468 aa15.71■□□□□ 0.11
ABCB1-207ENST00000488737 TEX2Q8IWB9 1127 aa15.71■□□□□ 0.11
ABCB1-207ENST00000488737 TRIM59Q8IWR1 403 aa15.71■□□□□ 0.11
ABCB1-207ENST00000488737 ERMNQ8TAM6 284 aa15.71■□□□□ 0.11
ABCB1-207ENST00000488737 CAGE1Q8TC20 777 aa15.71■□□□□ 0.11
ABCB1-207ENST00000488737 GMCL1Q96IK5 515 aa15.71■□□□□ 0.11
ABCB1-207ENST00000488737 AMNQ9BXJ7 453 aa15.71■□□□□ 0.11
ABCB1-207ENST00000488737 TANGO6Q9C0B7 1094 aa15.71■□□□□ 0.11
ABCB1-207ENST00000488737 POTEB3A0JP26 581 aa15.71■□□□□ 0.11
ABCB1-207ENST00000488737 POTECB2RU33 542 aa15.71■□□□□ 0.11
ABCB1-207ENST00000488737 SSBP05455 408 aaKnown RBP eCLIP15.71■□□□□ 0.11
ABCB1-207ENST00000488737 MMP14P50281 582 aa15.71■□□□□ 0.11
ABCB1-207ENST00000488737 SLC12A3P55017 1021 aa15.71■□□□□ 0.11
ABCB1-207ENST00000488737 ARHGAP4P98171 946 aa15.71■□□□□ 0.11
ABCB1-207ENST00000488737 POTEBQ6S5H4 581 aa15.71■□□□□ 0.11
ABCB1-207ENST00000488737 RNF10Q8N5U6 811 aaKnown RBP15.71■□□□□ 0.11
ABCB1-207ENST00000488737 CCDC155Q8N6L0 562 aa15.71■□□□□ 0.11
ABCB1-207ENST00000488737 ETNPPLQ8TBG4 499 aa15.71■□□□□ 0.11
ABCB1-207ENST00000488737 TRIM34Q9BYJ4 488 aa15.71■□□□□ 0.11
ABCB1-207ENST00000488737 KCTD10Q9H3F6 313 aa15.71■□□□□ 0.11
ABCB1-207ENST00000488737 ZCCHC17Q9NP64 241 aaKnown RBP15.71■□□□□ 0.11
ABCB1-207ENST00000488737 MED4Q9NPJ6 270 aa15.71■□□□□ 0.11
ABCB1-207ENST00000488737 JADE2Q9NQC1 790 aa15.71■□□□□ 0.11
ABCB1-207ENST00000488737 FAM198AQ9UFP1 575 aa15.71■□□□□ 0.11
ABCB1-207ENST00000488737 COL2A1P02458 1487 aaPredicted RBP15.71■□□□□ 0.1
ABCB1-207ENST00000488737 DDTLA6NHG4 134 aaPredicted RBP15.7■□□□□ 0.1
ABCB1-207ENST00000488737 SERPING1P05155 500 aa15.7■□□□□ 0.1
ABCB1-207ENST00000488737 TCP1P17987 556 aaKnown RBP15.7■□□□□ 0.1
ABCB1-207ENST00000488737 MAGEA1P43355 309 aa15.7■□□□□ 0.1
ABCB1-207ENST00000488737 ICA1Q05084 483 aa15.7■□□□□ 0.1
ABCB1-207ENST00000488737 SPIRE1Q08AE8 756 aa15.7■□□□□ 0.1
ABCB1-207ENST00000488737 SLC9C1Q4G0N8 1177 aa15.7■□□□□ 0.1
ABCB1-207ENST00000488737 HGSNATQ68CP4 663 aa15.7■□□□□ 0.1
ABCB1-207ENST00000488737 CCDC70Q6NSX1 233 aa15.7■□□□□ 0.1
ABCB1-207ENST00000488737 MMGT1Q8N4V1 131 aa15.7■□□□□ 0.1
ABCB1-207ENST00000488737 KCTD17Q8N5Z5 321 aa15.7■□□□□ 0.1
ABCB1-207ENST00000488737 FLAD1Q8NFF5 587 aa15.7■□□□□ 0.1
ABCB1-207ENST00000488737 GJA10Q969M2 543 aa15.7■□□□□ 0.1
ABCB1-207ENST00000488737 CAPZA3Q96KX2 299 aa15.7■□□□□ 0.1
ABCB1-207ENST00000488737 CAMKK2Q96RR4 588 aa15.7■□□□□ 0.1
ABCB1-207ENST00000488737 LUC7LQ9NQ29 371 aaKnown RBP15.7■□□□□ 0.1
ABCB1-207ENST00000488737 HYOU1Q9Y4L1 999 aa15.7■□□□□ 0.1
ABCB1-207ENST00000488737 MED24O75448 989 aa15.69■□□□□ 0.1
ABCB1-207ENST00000488737 SREBF1P36956 1147 aa15.69■□□□□ 0.1
ABCB1-207ENST00000488737 HERC4Q5GLZ8 1057 aaPredicted RBP15.69■□□□□ 0.1
ABCB1-207ENST00000488737 DACT2Q5SW24 774 aa15.69■□□□□ 0.1
ABCB1-207ENST00000488737 SIAH1Q8IUQ4 282 aa15.69■□□□□ 0.1
ABCB1-207ENST00000488737 FAM71BQ8TC56 605 aa15.69■□□□□ 0.1
ABCB1-207ENST00000488737 SCFD1Q8WVM8 642 aa15.69■□□□□ 0.1
ABCB1-207ENST00000488737 FAM20AQ96MK3 541 aa15.69■□□□□ 0.1
ABCB1-207ENST00000488737 EMILIN3Q9NT22 766 aa15.69■□□□□ 0.1
ABCB1-207ENST00000488737 CALCOCO1Q9P1Z2 691 aa15.69■□□□□ 0.1
ABCB1-207ENST00000488737 TSKSQ9UJT2 592 aa15.69■□□□□ 0.1
ABCB1-207ENST00000488737 SERPINA10Q9UK55 444 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms