RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 LY6KQ17RY6 165 aa21.89■■□□□ 1.09
CCM2-216ENST00000488727 IQSEC1Q6DN90 963 aa21.89■■□□□ 1.09
CCM2-216ENST00000488727 KCNH7Q9NS40 1196 aa21.89■■□□□ 1.09
CCM2-216ENST00000488727 DACT1Q9NYF0 836 aa21.89■■□□□ 1.09
CCM2-216ENST00000488727 CCDC39Q9UFE4 941 aa21.89■■□□□ 1.09
CCM2-216ENST00000488727 GNEQ9Y223 722 aaKnown RBP21.89■■□□□ 1.09
CCM2-216ENST00000488727 MRVI1Q9Y6F6 885 aa21.89■■□□□ 1.09
CCM2-216ENST00000488727 CYP3A7-CYP3A51PA0A087WV96 503 aa21.88■■□□□ 1.09
CCM2-216ENST00000488727 ARP10275 920 aa21.88■■□□□ 1.09
CCM2-216ENST00000488727 CYP3A7P24462 503 aa21.88■■□□□ 1.09
CCM2-216ENST00000488727 TTLL4Q14679 1199 aa21.88■■□□□ 1.09
CCM2-216ENST00000488727 DUSP28Q4G0W2 176 aa21.88■■□□□ 1.09
CCM2-216ENST00000488727 PRR16Q569H4 304 aa21.88■■□□□ 1.09
CCM2-216ENST00000488727 LHX8Q68G74 356 aa21.88■■□□□ 1.09
CCM2-216ENST00000488727 NIPA1Q7RTP0 329 aa21.88■■□□□ 1.09
CCM2-216ENST00000488727 NLRX1Q86UT6 975 aa21.88■■□□□ 1.09
CCM2-216ENST00000488727 COPS5Q92905 334 aa21.88■■□□□ 1.09
CCM2-216ENST00000488727 DDX41Q9UJV9 622 aaKnown RBP21.88■■□□□ 1.09
CCM2-216ENST00000488727 NOL7Q9UMY1 257 aaKnown RBP21.88■■□□□ 1.09
CCM2-216ENST00000488727 MOXD1Q6UVY6 613 aa21.87■■□□□ 1.09
CCM2-216ENST00000488727 PLA2G4DQ86XP0 818 aa21.87■■□□□ 1.09
CCM2-216ENST00000488727 MBOAT7Q96N66 472 aa21.87■■□□□ 1.09
CCM2-216ENST00000488727 DEFB118Q96PH6 123 aa21.87■■□□□ 1.09
CCM2-216ENST00000488727 POTEFA5A3E0 1075 aa21.86■■□□□ 1.09
CCM2-216ENST00000488727 SLC37A4O43826 429 aa21.86■■□□□ 1.09
CCM2-216ENST00000488727 CCNT1O60563 726 aaKnown RBP21.86■■□□□ 1.09
CCM2-216ENST00000488727 ATP9AO75110 1047 aa21.86■■□□□ 1.09
CCM2-216ENST00000488727 ATP2B1P20020 1258 aa21.86■■□□□ 1.09
CCM2-216ENST00000488727 UBA1P22314 1058 aaKnown RBP21.86■■□□□ 1.09
CCM2-216ENST00000488727 TOB1P50616 345 aaPredicted RBP21.86■■□□□ 1.09
CCM2-216ENST00000488727 PPP4R3AQ6IN85 833 aa21.86■■□□□ 1.09
CCM2-216ENST00000488727 USP28Q96RU2 1077 aa21.86■■□□□ 1.09
CCM2-216ENST00000488727 TNMDQ9H2S6 317 aa21.86■■□□□ 1.09
CCM2-216ENST00000488727 BCAS3Q9H6U6 928 aa21.86■■□□□ 1.09
CCM2-216ENST00000488727 TGFB3P10600 412 aa21.86■■□□□ 1.09
CCM2-216ENST00000488727 Q4G0T1 1027 aa21.86■■□□□ 1.09
CCM2-216ENST00000488727 KCNV1Q6PIU1 500 aa21.86■■□□□ 1.09
CCM2-216ENST00000488727 BRAPQ7Z569 592 aa21.86■■□□□ 1.09
CCM2-216ENST00000488727 UIMC1Q96RL1 719 aa21.86■■□□□ 1.09
CCM2-216ENST00000488727 PKD2L1Q9P0L9 805 aa21.86■■□□□ 1.09
CCM2-216ENST00000488727 KIAA0100Q14667 2235 aaKnown RBP21.85■■□□□ 1.09
CCM2-216ENST00000488727 MAFGO15525 162 aa21.85■■□□□ 1.09
CCM2-216ENST00000488727 MSCO60682 206 aa21.85■■□□□ 1.09
CCM2-216ENST00000488727 DUSP11O75319 330 aaKnown RBP21.85■■□□□ 1.09
CCM2-216ENST00000488727 RARBP10826 455 aa21.85■■□□□ 1.09
CCM2-216ENST00000488727 KCNA2P16389 499 aa21.85■■□□□ 1.09
CCM2-216ENST00000488727 IRX5P78411 483 aaPredicted RBP21.85■■□□□ 1.09
CCM2-216ENST00000488727 SETQ01105 290 aaPredicted RBP21.85■■□□□ 1.09
CCM2-216ENST00000488727 ABHD8Q96I13 439 aa21.85■■□□□ 1.09
CCM2-216ENST00000488727 CDHR1Q96JP9 859 aa21.85■■□□□ 1.09
CCM2-216ENST00000488727 DDX25Q9UHL0 483 aaKnown RBP21.85■■□□□ 1.09
CCM2-216ENST00000488727 SORBS3O60504 671 aa21.84■■□□□ 1.09
CCM2-216ENST00000488727 GCFC2P16383 781 aaKnown RBP21.84■■□□□ 1.09
CCM2-216ENST00000488727 TLK2Q86UE8 772 aa21.84■■□□□ 1.09
CCM2-216ENST00000488727 AGO4Q9HCK5 861 aaKnown RBP21.84■■□□□ 1.09
CCM2-216ENST00000488727 SYNRGQ9UMZ2 1314 aa21.84■■□□□ 1.09
CCM2-216ENST00000488727 NKRFO15226 690 aaKnown RBP eCLIP21.83■■□□□ 1.09
CCM2-216ENST00000488727 MSH4O15457 936 aa21.83■■□□□ 1.09
CCM2-216ENST00000488727 NR1I2O75469 434 aa21.83■■□□□ 1.09
CCM2-216ENST00000488727 GJB1P08034 283 aa21.83■■□□□ 1.09
CCM2-216ENST00000488727 MSNP26038 577 aaKnown RBP21.83■■□□□ 1.09
CCM2-216ENST00000488727 TRAPPC10P48553 1259 aa21.83■■□□□ 1.09
CCM2-216ENST00000488727 TYRO3Q06418 890 aa21.83■■□□□ 1.09
CCM2-216ENST00000488727 ITGB3BPQ13352 177 aaPredicted RBP21.83■■□□□ 1.09
CCM2-216ENST00000488727 MYSM1Q5VVJ2 828 aa21.83■■□□□ 1.09
CCM2-216ENST00000488727 TNS4Q8IZW8 715 aa21.83■■□□□ 1.09
CCM2-216ENST00000488727 SENP7Q9BQF6 1050 aa21.83■■□□□ 1.09
CCM2-216ENST00000488727 GGPS1O95749 300 aa21.83■■□□□ 1.08
CCM2-216ENST00000488727 PGK1P00558 417 aa21.83■■□□□ 1.08
CCM2-216ENST00000488727 ARHGAP1Q07960 439 aa21.83■■□□□ 1.08
CCM2-216ENST00000488727 TTC38Q5R3I4 469 aa21.83■■□□□ 1.08
CCM2-216ENST00000488727 POTEDQ86YR6 584 aa21.83■■□□□ 1.08
CCM2-216ENST00000488727 FAM200AQ8TCP9 573 aa21.83■■□□□ 1.08
CCM2-216ENST00000488727 U2AF1L4Q8WU68 220 aaKnown RBP21.83■■□□□ 1.08
CCM2-216ENST00000488727 GJA10Q969M2 543 aa21.83■■□□□ 1.08
CCM2-216ENST00000488727 NAP1L4Q99733 375 aaKnown RBP21.83■■□□□ 1.08
CCM2-216ENST00000488727 XPNPEP3Q9NQH7 507 aa21.83■■□□□ 1.08
CCM2-216ENST00000488727 ZKSCAN5Q9Y2L8 839 aa21.83■■□□□ 1.08
CCM2-216ENST00000488727 PCDHB6Q9Y5E3 794 aa21.83■■□□□ 1.08
CCM2-216ENST00000488727 CTAGE5O15320 804 aa21.82■■□□□ 1.08
CCM2-216ENST00000488727 DYNC1LI2O43237 492 aaPredicted RBP21.82■■□□□ 1.08
CCM2-216ENST00000488727 ADAMTS4O75173 837 aa21.82■■□□□ 1.08
CCM2-216ENST00000488727 GH1P01241 217 aa21.82■■□□□ 1.08
CCM2-216ENST00000488727 MCM7P33993 719 aa21.82■■□□□ 1.08
CCM2-216ENST00000488727 RILPL1Q5EBL4 403 aa21.82■■□□□ 1.08
CCM2-216ENST00000488727 CELF3Q5SZQ8 465 aaKnown RBP21.82■■□□□ 1.08
CCM2-216ENST00000488727 ETNPPLQ8TBG4 499 aa21.82■■□□□ 1.08
CCM2-216ENST00000488727 ZNF577Q9BSK1 485 aa21.82■■□□□ 1.08
CCM2-216ENST00000488727 CRISPLD2Q9H0B8 497 aa21.82■■□□□ 1.08
CCM2-216ENST00000488727 USP25Q9UHP3 1055 aa21.82■■□□□ 1.08
CCM2-216ENST00000488727 Q9Y3F1 56 aa21.82■■□□□ 1.08
CCM2-216ENST00000488727 TELO2Q9Y4R8 837 aa21.82■■□□□ 1.08
CCM2-216ENST00000488727 MYADML2A6NDP7 307 aa21.81■■□□□ 1.08
CCM2-216ENST00000488727 IPO5O00410 1097 aaKnown RBP21.81■■□□□ 1.08
CCM2-216ENST00000488727 FARP2O94887 1054 aaPredicted RBP21.81■■□□□ 1.08
CCM2-216ENST00000488727 SGPL1O95470 568 aa21.81■■□□□ 1.08
CCM2-216ENST00000488727 YEATS4O95619 227 aa21.81■■□□□ 1.08
CCM2-216ENST00000488727 GJA9P57773 515 aa21.81■■□□□ 1.08
CCM2-216ENST00000488727 NEDD9Q14511 834 aa21.81■■□□□ 1.08
CCM2-216ENST00000488727 ZNF174Q15697 407 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms