RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 TSR2Q969E8 191 aaKnown RBP6.3□□□□□ -1.4
SRRM1-215ENST00000488317 CHMP4CQ96CF2 233 aa6.3□□□□□ -1.4
SRRM1-215ENST00000488317 ASIC4Q96FT7 647 aa6.3□□□□□ -1.4
SRRM1-215ENST00000488317 CCDC120Q96HB5 630 aa6.3□□□□□ -1.4
SRRM1-215ENST00000488317 SEMA6BQ9H3T3 888 aa6.3□□□□□ -1.4
SRRM1-215ENST00000488317 PDLIM7Q9NR12 457 aa6.3□□□□□ -1.4
SRRM1-215ENST00000488317 TOMM22Q9NS69 142 aa6.3□□□□□ -1.4
SRRM1-215ENST00000488317 SHTN1A0MZ66 631 aa6.29□□□□□ -1.4
SRRM1-215ENST00000488317 MAFKO60675 156 aa6.29□□□□□ -1.4
SRRM1-215ENST00000488317 FBXO21O94952 628 aa6.29□□□□□ -1.4
SRRM1-215ENST00000488317 NTRK1P04629 796 aa6.29□□□□□ -1.4
SRRM1-215ENST00000488317 KIF11P52732 1056 aa6.29□□□□□ -1.4
SRRM1-215ENST00000488317 MVKQ03426 396 aa6.29□□□□□ -1.4
SRRM1-215ENST00000488317 PTPN21Q16825 1174 aa6.29□□□□□ -1.4
SRRM1-215ENST00000488317 ABCB5Q2M3G0 1257 aa6.29□□□□□ -1.4
SRRM1-215ENST00000488317 RGL3Q3MIN7 710 aa6.29□□□□□ -1.4
SRRM1-215ENST00000488317 BROXQ5VW32 411 aa6.29□□□□□ -1.4
SRRM1-215ENST00000488317 BICRALQ6AI39 1079 aa6.29□□□□□ -1.4
SRRM1-215ENST00000488317 HHIPL2Q6UWX4 724 aa6.29□□□□□ -1.4
SRRM1-215ENST00000488317 ZNF574Q6ZN55 896 aaPredicted RBP6.29□□□□□ -1.4
SRRM1-215ENST00000488317 SPRED2Q7Z698 418 aa6.29□□□□□ -1.4
SRRM1-215ENST00000488317 RIOX2Q8IUF8 465 aa6.29□□□□□ -1.4
SRRM1-215ENST00000488317 CHPFQ8IZ52 775 aa6.29□□□□□ -1.4
SRRM1-215ENST00000488317 NLGN4XQ8N0W4 816 aa6.29□□□□□ -1.4
SRRM1-215ENST00000488317 Q8N1Y9 231 aa6.29□□□□□ -1.4
SRRM1-215ENST00000488317 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.29□□□□□ -1.4
SRRM1-215ENST00000488317 HOOK2Q96ED9 719 aa6.29□□□□□ -1.4
SRRM1-215ENST00000488317 MENTQ9BUN1 341 aa6.29□□□□□ -1.4
SRRM1-215ENST00000488317 CD244Q9BZW8 370 aa6.29□□□□□ -1.4
SRRM1-215ENST00000488317 VTA1Q9NP79 307 aa6.29□□□□□ -1.4
SRRM1-215ENST00000488317 SLC6A20Q9NP91 592 aa6.29□□□□□ -1.4
SRRM1-215ENST00000488317 PRDM7Q9NQW5 492 aa6.29□□□□□ -1.4
SRRM1-215ENST00000488317 ZIM2Q9NZV7 527 aa6.29□□□□□ -1.4
SRRM1-215ENST00000488317 NOC2LQ9Y3T9 749 aaKnown RBP6.29□□□□□ -1.4
SRRM1-215ENST00000488317 NUB1Q9Y5A7 615 aa6.29□□□□□ -1.4
SRRM1-215ENST00000488317 WASHC2AQ641Q2 1341 aa6.28□□□□□ -1.4
SRRM1-215ENST00000488317 TCRBV5S4A2TA0A5A2 114 aa6.28□□□□□ -1.4
SRRM1-215ENST00000488317 MAN2B1O00754 1011 aa6.28□□□□□ -1.4
SRRM1-215ENST00000488317 AKAP10O43572 662 aa6.28□□□□□ -1.4
SRRM1-215ENST00000488317 TSPAN6O43657 245 aa6.28□□□□□ -1.4
SRRM1-215ENST00000488317 MT-CO1P00395 513 aa6.28□□□□□ -1.4
SRRM1-215ENST00000488317 FURINP09958 794 aa6.28□□□□□ -1.4
SRRM1-215ENST00000488317 MSL3P1P0C860 447 aa6.28□□□□□ -1.4
SRRM1-215ENST00000488317 ZBTB48P10074 688 aaPredicted RBP6.28□□□□□ -1.4
SRRM1-215ENST00000488317 YBX3P16989 372 aaKnown RBP eCLIP6.28□□□□□ -1.4
SRRM1-215ENST00000488317 LSP1P33241 339 aa6.28□□□□□ -1.4
SRRM1-215ENST00000488317 LRRC41Q15345 812 aa6.28□□□□□ -1.4
SRRM1-215ENST00000488317 CHRNA2Q15822 529 aa6.28□□□□□ -1.4
SRRM1-215ENST00000488317 HABP4Q5JVS0 413 aaKnown RBP6.28□□□□□ -1.4
SRRM1-215ENST00000488317 STEAP3Q658P3 488 aa6.28□□□□□ -1.4
SRRM1-215ENST00000488317 CPZQ66K79 652 aa6.28□□□□□ -1.4
SRRM1-215ENST00000488317 CREB3L3Q68CJ9 461 aa6.28□□□□□ -1.4
SRRM1-215ENST00000488317 CLRN3Q8NCR9 226 aa6.28□□□□□ -1.4
SRRM1-215ENST00000488317 PDZD8Q8NEN9 1154 aa6.28□□□□□ -1.4
SRRM1-215ENST00000488317 FLCNQ8NFG4 579 aa6.28□□□□□ -1.4
SRRM1-215ENST00000488317 ELF4Q99607 663 aaPredicted RBP6.28□□□□□ -1.4
SRRM1-215ENST00000488317 SP110Q9HB58 689 aa6.28□□□□□ -1.4
SRRM1-215ENST00000488317 ACSL6Q9UKU0 697 aa6.28□□□□□ -1.4
SRRM1-215ENST00000488317 SRPK3Q9UPE1 567 aa6.28□□□□□ -1.4
SRRM1-215ENST00000488317 ZNF652Q9Y2D9 606 aa6.28□□□□□ -1.4
SRRM1-215ENST00000488317 SPO11Q9Y5K1 396 aa6.28□□□□□ -1.4
SRRM1-215ENST00000488317 ATP23Q9Y6H3 246 aa6.28□□□□□ -1.4
SRRM1-215ENST00000488317 TNKSO95271 1327 aa6.27□□□□□ -1.41
SRRM1-215ENST00000488317 FITM1A5D6W6 292 aa6.27□□□□□ -1.41
SRRM1-215ENST00000488317 SLC27A2O14975 620 aa6.27□□□□□ -1.41
SRRM1-215ENST00000488317 TGM5O43548 720 aa6.27□□□□□ -1.41
SRRM1-215ENST00000488317 NRDCO43847 1150 aa6.27□□□□□ -1.41
SRRM1-215ENST00000488317 CYP4F8P98187 520 aa6.27□□□□□ -1.41
SRRM1-215ENST00000488317 KIR3DS1Q14943 382 aa6.27□□□□□ -1.41
SRRM1-215ENST00000488317 TMEM132BQ14DG7 1078 aa6.27□□□□□ -1.41
SRRM1-215ENST00000488317 RBM12BQ8IXT5 1001 aaKnown RBP6.27□□□□□ -1.41
SRRM1-215ENST00000488317 UHMK1Q8TAS1 419 aaKnown RBP6.27□□□□□ -1.41
SRRM1-215ENST00000488317 SH3RF2Q8TEC5 729 aa6.27□□□□□ -1.41
SRRM1-215ENST00000488317 PLCD4Q9BRC7 762 aa6.27□□□□□ -1.41
SRRM1-215ENST00000488317 C14orf119Q9NWQ9 140 aa6.27□□□□□ -1.41
SRRM1-215ENST00000488317 FBLN5Q9UBX5 448 aa6.27□□□□□ -1.41
SRRM1-215ENST00000488317 ANGEL1Q9UNK9 670 aaKnown RBP6.27□□□□□ -1.41
SRRM1-215ENST00000488317 E2F8A0AVK6 867 aa6.26□□□□□ -1.41
SRRM1-215ENST00000488317 GOLGA8AA7E2F4 631 aa6.26□□□□□ -1.41
SRRM1-215ENST00000488317 GOLGA8BA8MQT2 603 aa6.26□□□□□ -1.41
SRRM1-215ENST00000488317 DVL2O14641 736 aa6.26□□□□□ -1.41
SRRM1-215ENST00000488317 HGSO14964 777 aaPredicted RBP6.26□□□□□ -1.41
SRRM1-215ENST00000488317 SCGB1D2O95969 90 aa6.26□□□□□ -1.41
SRRM1-215ENST00000488317 CT47B1P0C2W7 299 aaPredicted RBP6.26□□□□□ -1.41
SRRM1-215ENST00000488317 SSTR4P31391 388 aa6.26□□□□□ -1.41
SRRM1-215ENST00000488317 IARSP41252 1262 aaKnown RBP6.26□□□□□ -1.41
SRRM1-215ENST00000488317 SCAND1P57086 179 aa6.26□□□□□ -1.41
SRRM1-215ENST00000488317 KLF1Q13351 362 aaPredicted RBP6.26□□□□□ -1.41
SRRM1-215ENST00000488317 PIN1Q13526 163 aaPredicted RBP6.26□□□□□ -1.41
SRRM1-215ENST00000488317 TERF2Q15554 542 aa6.26□□□□□ -1.41
SRRM1-215ENST00000488317 FIGNQ5HY92 759 aa6.26□□□□□ -1.41
SRRM1-215ENST00000488317 PGM2L1Q6PCE3 622 aa6.26□□□□□ -1.41
SRRM1-215ENST00000488317 PNMA8AQ86V59 439 aaPredicted RBP6.26□□□□□ -1.41
SRRM1-215ENST00000488317 VSIG10LQ86VR7 867 aa6.26□□□□□ -1.41
SRRM1-215ENST00000488317 FUBP3Q96I24 572 aaKnown RBP eCLIP6.26□□□□□ -1.41
SRRM1-215ENST00000488317 C8orf48Q96LL4 319 aa6.26□□□□□ -1.41
SRRM1-215ENST00000488317 AP5M1Q9H0R1 490 aa6.26□□□□□ -1.41
SRRM1-215ENST00000488317 ACSS2Q9NR19 701 aa6.26□□□□□ -1.41
SRRM1-215ENST00000488317 RIC8BQ9NVN3 520 aa6.26□□□□□ -1.41
SRRM1-215ENST00000488317 GEMIN8Q9NWZ8 242 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms