RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 C11orf49Q9H6J7 331 aa17.84■□□□□ 0.45
C9orf3-219ENST00000488186 POLR3EQ9NVU0 708 aa17.84■□□□□ 0.45
C9orf3-219ENST00000488186 CYP3A7-CYP3A51PA0A087WV96 503 aa17.83■□□□□ 0.44
C9orf3-219ENST00000488186 MYADML2A6NDP7 307 aa17.83■□□□□ 0.44
C9orf3-219ENST00000488186 FAM205CA6NFA0 338 aa17.83■□□□□ 0.44
C9orf3-219ENST00000488186 MOXD2PA6NHM9 499 aa17.83■□□□□ 0.44
C9orf3-219ENST00000488186 IPO5O00410 1097 aaKnown RBP17.83■□□□□ 0.44
C9orf3-219ENST00000488186 KPNA6O60684 536 aa17.83■□□□□ 0.44
C9orf3-219ENST00000488186 ATP9AO75110 1047 aa17.83■□□□□ 0.44
C9orf3-219ENST00000488186 BAG4O95429 457 aaKnown RBP17.83■□□□□ 0.44
C9orf3-219ENST00000488186 TDP2O95551 362 aa17.83■□□□□ 0.44
C9orf3-219ENST00000488186 SYT1P21579 422 aa17.83■□□□□ 0.44
C9orf3-219ENST00000488186 CYP3A7P24462 503 aa17.83■□□□□ 0.44
C9orf3-219ENST00000488186 U2AF2P26368 475 aaKnown RBP eCLIP17.83■□□□□ 0.44
C9orf3-219ENST00000488186 ANP32AP39687 249 aaKnown RBP17.83■□□□□ 0.44
C9orf3-219ENST00000488186 ARHGAP1Q07960 439 aa17.83■□□□□ 0.44
C9orf3-219ENST00000488186 DGKDQ16760 1214 aa17.83■□□□□ 0.44
C9orf3-219ENST00000488186 Q4G0T1 1027 aa17.83■□□□□ 0.44
C9orf3-219ENST00000488186 PPP4R3AQ6IN85 833 aa17.83■□□□□ 0.44
C9orf3-219ENST00000488186 METTL7BQ6UX53 244 aa17.83■□□□□ 0.44
C9orf3-219ENST00000488186 EMID1Q96A84 441 aaPredicted RBP17.83■□□□□ 0.44
C9orf3-219ENST00000488186 FERMT2Q96AC1 680 aa17.83■□□□□ 0.44
C9orf3-219ENST00000488186 UIMC1Q96RL1 719 aa17.83■□□□□ 0.44
C9orf3-219ENST00000488186 TBC1D22BQ9NU19 505 aa17.83■□□□□ 0.44
C9orf3-219ENST00000488186 IGLV3-22A0A075B6J6 115 aa17.82■□□□□ 0.44
C9orf3-219ENST00000488186 A6NJR5 290 aa17.82■□□□□ 0.44
C9orf3-219ENST00000488186 ASGR1P07306 291 aa17.82■□□□□ 0.44
C9orf3-219ENST00000488186 PDIA4P13667 645 aaKnown RBP17.82■□□□□ 0.44
C9orf3-219ENST00000488186 KCNA2P16389 499 aa17.82■□□□□ 0.44
C9orf3-219ENST00000488186 ACLYP53396 1101 aa17.82■□□□□ 0.44
C9orf3-219ENST00000488186 IRX5P78411 483 aaPredicted RBP17.82■□□□□ 0.44
C9orf3-219ENST00000488186 PPTC7Q8NI37 304 aa17.82■□□□□ 0.44
C9orf3-219ENST00000488186 DIS3LQ8TF46 1054 aaKnown RBP17.82■□□□□ 0.44
C9orf3-219ENST00000488186 GLT1D1Q96MS3 346 aa17.82■□□□□ 0.44
C9orf3-219ENST00000488186 JPH1Q9HDC5 661 aaPredicted RBP17.82■□□□□ 0.44
C9orf3-219ENST00000488186 SLC9A2Q9UBY0 812 aa17.82■□□□□ 0.44
C9orf3-219ENST00000488186 MYH7BA7E2Y1 1941 aa17.82■□□□□ 0.44
C9orf3-219ENST00000488186 NFASCO94856 1347 aa17.81■□□□□ 0.44
C9orf3-219ENST00000488186 KIF28PB7ZC32 967 aa17.81■□□□□ 0.44
C9orf3-219ENST00000488186 DDX39AO00148 427 aaKnown RBP17.81■□□□□ 0.44
C9orf3-219ENST00000488186 STX6O43752 255 aa17.81■□□□□ 0.44
C9orf3-219ENST00000488186 CABYRO75952 493 aa17.81■□□□□ 0.44
C9orf3-219ENST00000488186 CHMP4BP1P59074 171 aa17.81■□□□□ 0.44
C9orf3-219ENST00000488186 C1orf53Q5VUE5 145 aa17.81■□□□□ 0.44
C9orf3-219ENST00000488186 CCSAPQ6IQ19 270 aaPredicted RBP17.81■□□□□ 0.44
C9orf3-219ENST00000488186 SEPT1Q8WYJ6 367 aa17.81■□□□□ 0.44
C9orf3-219ENST00000488186 BCAS3Q9H6U6 928 aa17.81■□□□□ 0.44
C9orf3-219ENST00000488186 PHF24Q9UPV7 400 aa17.81■□□□□ 0.44
C9orf3-219ENST00000488186 CEP290O15078 2479 aa17.81■□□□□ 0.44
C9orf3-219ENST00000488186 MSH4O15457 936 aa17.8■□□□□ 0.44
C9orf3-219ENST00000488186 GAS7O60861 476 aa17.8■□□□□ 0.44
C9orf3-219ENST00000488186 PPFIA4O75335 1185 aa17.8■□□□□ 0.44
C9orf3-219ENST00000488186 MMP3P08254 477 aa17.8■□□□□ 0.44
C9orf3-219ENST00000488186 MCM7P33993 719 aa17.8■□□□□ 0.44
C9orf3-219ENST00000488186 TRAPPC10P48553 1259 aa17.8■□□□□ 0.44
C9orf3-219ENST00000488186 HSDL1Q3SXM5 330 aa17.8■□□□□ 0.44
C9orf3-219ENST00000488186 LRCH2Q5VUJ6 765 aa17.8■□□□□ 0.44
C9orf3-219ENST00000488186 CXCL17Q6UXB2 119 aa17.8■□□□□ 0.44
C9orf3-219ENST00000488186 MTG1Q9BT17 334 aaPredicted RBP17.8■□□□□ 0.44
C9orf3-219ENST00000488186 TEKT3Q9BXF9 490 aa17.8■□□□□ 0.44
C9orf3-219ENST00000488186 STARD7Q9NQZ5 370 aa17.8■□□□□ 0.44
C9orf3-219ENST00000488186 A0A1W2PQ45 241 aaPredicted RBP17.79■□□□□ 0.44
C9orf3-219ENST00000488186 A0A1W2PQY0 241 aa17.79■□□□□ 0.44
C9orf3-219ENST00000488186 CTAGE5O15320 804 aa17.79■□□□□ 0.44
C9orf3-219ENST00000488186 EDIL3O43854 480 aa17.79■□□□□ 0.44
C9orf3-219ENST00000488186 NEMFO60524 1076 aa17.79■□□□□ 0.44
C9orf3-219ENST00000488186 ITGB3BPQ13352 177 aaPredicted RBP17.79■□□□□ 0.44
C9orf3-219ENST00000488186 ZNF174Q15697 407 aa17.79■□□□□ 0.44
C9orf3-219ENST00000488186 CALCRLQ16602 461 aa17.79■□□□□ 0.44
C9orf3-219ENST00000488186 RILPL1Q5EBL4 403 aa17.79■□□□□ 0.44
C9orf3-219ENST00000488186 TTC38Q5R3I4 469 aa17.79■□□□□ 0.44
C9orf3-219ENST00000488186 UTP14CQ5TAP6 766 aaKnown RBP17.79■□□□□ 0.44
C9orf3-219ENST00000488186 BRAPQ7Z569 592 aa17.79■□□□□ 0.44
C9orf3-219ENST00000488186 FERMT3Q86UX7 667 aa17.79■□□□□ 0.44
C9orf3-219ENST00000488186 SLFN12Q8IYM2 578 aa17.79■□□□□ 0.44
C9orf3-219ENST00000488186 LENG9Q96B70 501 aa17.79■□□□□ 0.44
C9orf3-219ENST00000488186 FAM20AQ96MK3 541 aa17.79■□□□□ 0.44
C9orf3-219ENST00000488186 MBOAT7Q96N66 472 aa17.79■□□□□ 0.44
C9orf3-219ENST00000488186 RIT2Q99578 217 aa17.79■□□□□ 0.44
C9orf3-219ENST00000488186 GPR20Q99678 358 aa17.79■□□□□ 0.44
C9orf3-219ENST00000488186 SEZ6LQ9BYH1 1024 aa17.79■□□□□ 0.44
C9orf3-219ENST00000488186 SAMM50Q9Y512 469 aa17.79■□□□□ 0.44
C9orf3-219ENST00000488186 DNAH12Q6ZR08 3092 aa17.79■□□□□ 0.44
C9orf3-219ENST00000488186 ALPK3Q96L96 1907 aa17.78■□□□□ 0.44
C9orf3-219ENST00000488186 TBX3O15119 743 aa17.78■□□□□ 0.44
C9orf3-219ENST00000488186 SLC37A4O43826 429 aa17.78■□□□□ 0.44
C9orf3-219ENST00000488186 ATN1P54259 1190 aaPredicted RBP17.78■□□□□ 0.44
C9orf3-219ENST00000488186 KRT76Q01546 638 aa17.78■□□□□ 0.44
C9orf3-219ENST00000488186 SNX17Q15036 470 aa17.78■□□□□ 0.44
C9orf3-219ENST00000488186 SLC5A5Q92911 643 aa17.78■□□□□ 0.44
C9orf3-219ENST00000488186 AZI2Q9H6S1 392 aa17.78■□□□□ 0.44
C9orf3-219ENST00000488186 ELP1O95163 1332 aa17.77■□□□□ 0.44
C9orf3-219ENST00000488186 TCF7P36402 384 aaPredicted RBP17.77■□□□□ 0.44
C9orf3-219ENST00000488186 ACTR2P61160 394 aa17.77■□□□□ 0.44
C9orf3-219ENST00000488186 PURAQ00577 322 aaKnown RBP17.77■□□□□ 0.44
C9orf3-219ENST00000488186 ORC2Q13416 577 aaPredicted RBP17.77■□□□□ 0.44
C9orf3-219ENST00000488186 MIS18BP1Q6P0N0 1132 aa17.77■□□□□ 0.44
C9orf3-219ENST00000488186 POTEDQ86YR6 584 aa17.77■□□□□ 0.44
C9orf3-219ENST00000488186 GLG1Q92896 1179 aa17.77■□□□□ 0.44
C9orf3-219ENST00000488186 KATNAL1Q9BW62 490 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms