RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 NAA35Q5VZE5 725 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 CRELD2Q6UXH1 353 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 KDM7AQ6ZMT4 941 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 TRAPPC11Q7Z392 1133 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 ELOA2Q8IYF1 753 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 FUKQ8N0W3 1084 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 C1orf131Q8NDD1 294 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 LMBR1Q8WVP7 490 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 P3H4Q92791 437 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 SAAL1Q96ER3 474 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 RSRC1Q96IZ7 334 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 DESI2Q9BSY9 194 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 SELENOOQ9BVL4 669 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 FTOQ9C0B1 505 aaKnown RBP eCLIP5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 EPN3Q9H201 632 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 EHD4Q9H223 541 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 FAM184BQ9ULE4 1060 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 TPX2Q9ULW0 747 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 RFX7Q2KHR2 1363 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 DDX60Q8IY21 1712 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 LAMA4Q16363 1823 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 ERICH2A1L162 156 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 MGRN1O60291 552 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 SMNDC1O75940 238 aaKnown RBP eCLIP5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 HMOX1P09601 288 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 RACK1P63244 317 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 MLLT1Q03111 559 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 GOLGA8FQ08AF8 430 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 GOLGA8DPQ0D2H9 430 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 XRCC4Q13426 336 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 COL9A3Q14050 684 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 NAA25Q14CX7 972 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 LACTB2Q53H82 288 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 HSP90AB4PQ58FF6 505 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 HSP90AB2PQ58FF8 381 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 ZNF569Q5MCW4 686 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 NUTM2GQ5VZR2 741 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 ADAMTSL4Q6UY14 1074 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 RAD9BQ6WBX8 426 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 HFE2Q6ZVN8 426 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 ANKRD23Q86SG2 305 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 MFN1Q8IWA4 741 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 SLC35F6Q8N357 371 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 KLHL23Q8NBE8 558 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 LINC00301Q8NCQ3 95 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 NSUN7Q8NE18 718 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 PARD3BQ8TEW8 1205 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 RIN2Q8WYP3 895 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 CCDC47Q96A33 483 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 EVI5LQ96CN4 794 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 CCDC51Q96ER9 411 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 ACSBG1Q96GR2 724 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 C8orf37Q96NL8 207 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 OSBPL9Q96SU4 736 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 KIF9Q9HAQ2 790 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 IL1RAPL2Q9NP60 686 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 FANCLQ9NW38 375 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 CORO1CQ9ULV4 474 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 MRC1P22897 1456 aa5.3□□□□□ -1.56
CDC42BPA-213ENST00000488131 EDC4Q6P2E9 1401 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 A0A1B0GVL5 298 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 FAM83GA6ND36 823 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 METTL12A8MUP2 240 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 F6X3S4 739 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 PSMD14O00487 310 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 DYRK3O43781 588 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 CAND2O75155 1236 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 ALDH1L1O75891 902 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 DNAJC8O75937 253 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 RTN3O95197 1032 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 PSAPP07602 524 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 EDN3P14138 238 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 CMA1P23946 247 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 LSP1P33241 339 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 PBX1P40424 430 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 MAGEA8P43361 318 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 APBA1Q02410 837 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 PTPN12Q05209 780 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 ITIH3Q06033 890 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 CKAP4Q07065 602 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 TRIM28Q13263 835 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 RIPK1Q13546 671 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 TAF1CQ15572 869 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 ZNF394Q53GI3 561 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 ALS2CLQ60I27 953 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 MIS18BP1Q6P0N0 1132 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 CCNI2Q6ZMN8 369 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 G2E3Q7L622 706 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 HDGFL2Q7Z4V5 671 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 RASSF8Q8NHQ8 419 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 ZNF473Q8WTR7 871 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 SPDL1Q96EA4 605 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 THOC1Q96FV9 657 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 OSMRQ99650 979 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 SRA1Q9HD15 236 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 SLC39A2Q9NP94 309 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 DZANK1Q9NVP4 752 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 IRAK4Q9NWZ3 460 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 HPSEQ9Y251 543 aa5.29□□□□□ -1.56
CDC42BPA-213ENST00000488131 SAMM50Q9Y512 469 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms