RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 EDIL3O43854 480 aa15.27■□□□□ 0.03
COPS7B-221ENST00000488111 CCNT1O60563 726 aaKnown RBP15.27■□□□□ 0.03
COPS7B-221ENST00000488111 N4BP1O75113 896 aaKnown RBP15.27■□□□□ 0.03
COPS7B-221ENST00000488111 HOXA7P31268 230 aaPredicted RBP15.27■□□□□ 0.03
COPS7B-221ENST00000488111 TRAPPC10P48553 1259 aa15.27■□□□□ 0.03
COPS7B-221ENST00000488111 GRIN1Q05586 938 aa15.27■□□□□ 0.03
COPS7B-221ENST00000488111 PTGDRQ13258 359 aa15.27■□□□□ 0.03
COPS7B-221ENST00000488111 ISM2Q6H9L7 571 aa15.27■□□□□ 0.03
COPS7B-221ENST00000488111 SNRNP48Q6IEG0 339 aaKnown RBP15.27■□□□□ 0.03
COPS7B-221ENST00000488111 GPAT2Q6NUI2 795 aa15.27■□□□□ 0.03
COPS7B-221ENST00000488111 FASTKD5Q7L8L6 764 aaKnown RBP15.27■□□□□ 0.03
COPS7B-221ENST00000488111 NEK8Q86SG6 692 aa15.27■□□□□ 0.03
COPS7B-221ENST00000488111 SUGP1Q8IWZ8 645 aaKnown RBP15.27■□□□□ 0.03
COPS7B-221ENST00000488111 CLEC4DQ8WXI8 215 aa15.27■□□□□ 0.03
COPS7B-221ENST00000488111 PNKPQ96T60 521 aa15.27■□□□□ 0.03
COPS7B-221ENST00000488111 GLT8D2Q9H1C3 349 aa15.27■□□□□ 0.03
COPS7B-221ENST00000488111 ASCC2Q9H1I8 757 aaPredicted RBP15.27■□□□□ 0.03
COPS7B-221ENST00000488111 ZNF214Q9UL59 606 aaPredicted RBP15.27■□□□□ 0.03
COPS7B-221ENST00000488111 MS4A4AQ96JQ5 239 aa15.26■□□□□ 0.03
COPS7B-221ENST00000488111 PTPRFP10586 1907 aa15.26■□□□□ 0.03
COPS7B-221ENST00000488111 GCOM1H8Y6P7 765 aaPredicted RBP15.26■□□□□ 0.03
COPS7B-221ENST00000488111 POLR2MP0CAP2 368 aa15.26■□□□□ 0.03
COPS7B-221ENST00000488111 FDX1P10109 184 aa15.26■□□□□ 0.03
COPS7B-221ENST00000488111 PTPN21Q16825 1174 aa15.26■□□□□ 0.03
COPS7B-221ENST00000488111 SPECC1Q5M775 1068 aa15.26■□□□□ 0.03
COPS7B-221ENST00000488111 SPRYD7Q5W111 196 aa15.26■□□□□ 0.03
COPS7B-221ENST00000488111 ANO3Q9BYT9 981 aa15.26■□□□□ 0.03
COPS7B-221ENST00000488111 ABCB6Q9NP58 842 aa15.26■□□□□ 0.03
COPS7B-221ENST00000488111 FANCLQ9NW38 375 aa15.26■□□□□ 0.03
COPS7B-221ENST00000488111 CDC23Q9UJX2 597 aa15.26■□□□□ 0.03
COPS7B-221ENST00000488111 CEP131Q9UPN4 1083 aa15.26■□□□□ 0.03
COPS7B-221ENST00000488111 HPSEQ9Y251 543 aa15.26■□□□□ 0.03
COPS7B-221ENST00000488111 PASKQ96RG2 1323 aa15.25■□□□□ 0.03
COPS7B-221ENST00000488111 CCL15-CCL14A0A0B4J2E2 113 aa15.25■□□□□ 0.03
COPS7B-221ENST00000488111 SPDYE3A6NKU9 549 aa15.25■□□□□ 0.03
COPS7B-221ENST00000488111 PPP6R2O75170 966 aa15.25■□□□□ 0.03
COPS7B-221ENST00000488111 ZNF157P51786 506 aaPredicted RBP15.25■□□□□ 0.03
COPS7B-221ENST00000488111 TUBB2AQ13885 445 aa15.25■□□□□ 0.03
COPS7B-221ENST00000488111 CCL15Q16663 113 aa15.25■□□□□ 0.03
COPS7B-221ENST00000488111 PAGR1Q9BTK6 254 aa15.25■□□□□ 0.03
COPS7B-221ENST00000488111 TUBB2BQ9BVA1 445 aa15.25■□□□□ 0.03
COPS7B-221ENST00000488111 MRPL44Q9H9J2 332 aaKnown RBP15.25■□□□□ 0.03
COPS7B-221ENST00000488111 BTBD7Q9P203 1132 aa15.25■□□□□ 0.03
COPS7B-221ENST00000488111 FAM237AA0A1B0GTK4 181 aa15.25■□□□□ 0.03
COPS7B-221ENST00000488111 TDP2O95551 362 aa15.25■□□□□ 0.03
COPS7B-221ENST00000488111 CYP2C8P10632 490 aa15.25■□□□□ 0.03
COPS7B-221ENST00000488111 KARSQ15046 597 aaKnown RBP15.25■□□□□ 0.03
COPS7B-221ENST00000488111 SAPCD2Q86UD0 394 aa15.25■□□□□ 0.03
COPS7B-221ENST00000488111 BRI3BPQ8WY22 251 aa15.25■□□□□ 0.03
COPS7B-221ENST00000488111 TMEM60Q9H2L4 133 aa15.25■□□□□ 0.03
COPS7B-221ENST00000488111 RNF146Q9NTX7 359 aa15.25■□□□□ 0.03
COPS7B-221ENST00000488111 RLFQ13129 1914 aa15.24■□□□□ 0.03
COPS7B-221ENST00000488111 LOC102724159A0A0B4J2E5 919 aa15.24■□□□□ 0.03
COPS7B-221ENST00000488111 PIK3CDO00329 1044 aa15.24■□□□□ 0.03
COPS7B-221ENST00000488111 STAT3P40763 770 aa15.24■□□□□ 0.03
COPS7B-221ENST00000488111 SYKP43405 635 aa15.24■□□□□ 0.03
COPS7B-221ENST00000488111 GTF2A2P52657 109 aa15.24■□□□□ 0.03
COPS7B-221ENST00000488111 HERVK_113P62684 666 aa15.24■□□□□ 0.03
COPS7B-221ENST00000488111 UBXN2AP68543 259 aa15.24■□□□□ 0.03
COPS7B-221ENST00000488111 PWP2Q15269 919 aaKnown RBP15.24■□□□□ 0.03
COPS7B-221ENST00000488111 SPECC1LQ69YQ0 1117 aa15.24■□□□□ 0.03
COPS7B-221ENST00000488111 NSMFQ6X4W1 530 aa15.24■□□□□ 0.03
COPS7B-221ENST00000488111 LBX2Q6XYB7 198 aa15.24■□□□□ 0.03
COPS7B-221ENST00000488111 DHX37Q8IY37 1157 aaKnown RBP15.24■□□□□ 0.03
COPS7B-221ENST00000488111 EFCAB13Q8IY85 973 aa15.24■□□□□ 0.03
COPS7B-221ENST00000488111 JMYQ8N9B5 988 aa15.24■□□□□ 0.03
COPS7B-221ENST00000488111 KRI1Q8N9T8 703 aaKnown RBP15.24■□□□□ 0.03
COPS7B-221ENST00000488111 SMC1BQ8NDV3 1235 aa15.24■□□□□ 0.03
COPS7B-221ENST00000488111 UIMC1Q96RL1 719 aa15.24■□□□□ 0.03
COPS7B-221ENST00000488111 ZSWIM4Q9H7M6 989 aa15.24■□□□□ 0.03
COPS7B-221ENST00000488111 FBXO2Q9UK22 296 aaPredicted RBP15.24■□□□□ 0.03
COPS7B-221ENST00000488111 MYPNQ86TC9 1320 aa15.24■□□□□ 0.03
COPS7B-221ENST00000488111 CETPP11597 493 aa15.24■□□□□ 0.03
COPS7B-221ENST00000488111 AP3B2Q13367 1082 aa15.24■□□□□ 0.03
COPS7B-221ENST00000488111 CASP8Q14790 479 aa15.24■□□□□ 0.03
COPS7B-221ENST00000488111 PDILTQ8N807 584 aa15.24■□□□□ 0.03
COPS7B-221ENST00000488111 C4orf32Q8N8J7 132 aa15.24■□□□□ 0.03
COPS7B-221ENST00000488111 CNNM3Q8NE01 707 aa15.24■□□□□ 0.03
COPS7B-221ENST00000488111 DRC1Q96MC2 740 aa15.24■□□□□ 0.03
COPS7B-221ENST00000488111 DESI2Q9BSY9 194 aa15.24■□□□□ 0.03
COPS7B-221ENST00000488111 TEX13BQ9BXU2 312 aa15.24■□□□□ 0.03
COPS7B-221ENST00000488111 GBP3Q9H0R5 595 aa15.24■□□□□ 0.03
COPS7B-221ENST00000488111 MED4Q9NPJ6 270 aa15.24■□□□□ 0.03
COPS7B-221ENST00000488111 BTBD19C9JJ37 291 aa15.23■□□□□ 0.03
COPS7B-221ENST00000488111 PPFIA4O75335 1185 aa15.23■□□□□ 0.03
COPS7B-221ENST00000488111 OSBPP22059 807 aa15.23■□□□□ 0.03
COPS7B-221ENST00000488111 ADKP55263 362 aaKnown RBP15.23■□□□□ 0.03
COPS7B-221ENST00000488111 ATP2C1P98194 919 aaPredicted RBP15.23■□□□□ 0.03
COPS7B-221ENST00000488111 SWT1Q5T5J6 900 aaKnown RBP15.23■□□□□ 0.03
COPS7B-221ENST00000488111 PURBQ96QR8 312 aaKnown RBP15.23■□□□□ 0.03
COPS7B-221ENST00000488111 DEF6Q9H4E7 631 aa15.23■□□□□ 0.03
COPS7B-221ENST00000488111 SUGCTQ9HAC7 445 aa15.23■□□□□ 0.03
COPS7B-221ENST00000488111 COL20A1Q9P218 1284 aa15.23■□□□□ 0.03
COPS7B-221ENST00000488111 PUF60Q9UHX1 559 aaKnown RBP15.23■□□□□ 0.03
COPS7B-221ENST00000488111 PDHXO00330 501 aa15.22■□□□□ 0.03
COPS7B-221ENST00000488111 SLC37A4O43826 429 aa15.22■□□□□ 0.03
COPS7B-221ENST00000488111 CCDC175P0C221 793 aa15.22■□□□□ 0.03
COPS7B-221ENST00000488111 PTPREP23469 700 aa15.22■□□□□ 0.03
COPS7B-221ENST00000488111 OAZ1P54368 228 aa15.22■□□□□ 0.03
COPS7B-221ENST00000488111 SHC4Q6S5L8 630 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms