RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 LRRC8AQ8IWT6 810 aa22.7■■□□□ 1.23
PHF1-209ENST00000487667 EIF2AK1Q9BQI3 630 aaKnown RBP22.7■■□□□ 1.23
PHF1-209ENST00000487667 RRAGCQ9HB90 399 aa22.7■■□□□ 1.23
PHF1-209ENST00000487667 UBIAD1Q9Y5Z9 338 aa22.7■■□□□ 1.23
PHF1-209ENST00000487667 LRRC10BA6NIK2 292 aa22.7■■□□□ 1.22
PHF1-209ENST00000487667 FGFR1OPO95684 399 aaKnown RBP22.7■■□□□ 1.22
PHF1-209ENST00000487667 CCDC144BQ3MJ40 725 aa22.7■■□□□ 1.22
PHF1-209ENST00000487667 GUF1Q8N442 669 aaKnown RBP22.7■■□□□ 1.22
PHF1-209ENST00000487667 SYT2Q8N9I0 419 aaPredicted RBP22.7■■□□□ 1.22
PHF1-209ENST00000487667 KCNF1Q9H3M0 494 aa22.7■■□□□ 1.22
PHF1-209ENST00000487667 ACAD9Q9H845 621 aa22.7■■□□□ 1.22
PHF1-209ENST00000487667 JADE2Q9NQC1 790 aa22.7■■□□□ 1.22
PHF1-209ENST00000487667 TBC1D22BQ9NU19 505 aa22.7■■□□□ 1.22
PHF1-209ENST00000487667 COL20A1Q9P218 1284 aa22.7■■□□□ 1.22
PHF1-209ENST00000487667 LIMA1Q9UHB6 759 aaKnown RBP22.7■■□□□ 1.22
PHF1-209ENST00000487667 MAFGO15525 162 aa22.69■■□□□ 1.22
PHF1-209ENST00000487667 SPATA31C1P0DKV0 1188 aa22.69■■□□□ 1.22
PHF1-209ENST00000487667 EEF1GP26641 437 aaKnown RBP22.69■■□□□ 1.22
PHF1-209ENST00000487667 EPHA7Q15375 998 aa22.69■■□□□ 1.22
PHF1-209ENST00000487667 CHST13Q8NET6 341 aa22.69■■□□□ 1.22
PHF1-209ENST00000487667 P2RX5Q93086 422 aa22.69■■□□□ 1.22
PHF1-209ENST00000487667 ZNF830Q96NB3 372 aaPredicted RBP22.69■■□□□ 1.22
PHF1-209ENST00000487667 RMDN3Q96TC7 470 aa22.69■■□□□ 1.22
PHF1-209ENST00000487667 WDR90Q96KV7 1748 aa22.69■■□□□ 1.22
PHF1-209ENST00000487667 SPDYE5A6NIY4 337 aa22.69■■□□□ 1.22
PHF1-209ENST00000487667 SPDYE16A6NNV3 312 aaPredicted RBP22.69■■□□□ 1.22
PHF1-209ENST00000487667 E9PMD0 336 aa22.69■■□□□ 1.22
PHF1-209ENST00000487667 IDEP14735 1019 aa22.69■■□□□ 1.22
PHF1-209ENST00000487667 UBXN2AP68543 259 aa22.69■■□□□ 1.22
PHF1-209ENST00000487667 EHHADHQ08426 723 aa22.69■■□□□ 1.22
PHF1-209ENST00000487667 STK4Q13043 487 aa22.69■■□□□ 1.22
PHF1-209ENST00000487667 NR1I3Q14994 352 aa22.69■■□□□ 1.22
PHF1-209ENST00000487667 ARHGEF16Q5VV41 709 aa22.69■■□□□ 1.22
PHF1-209ENST00000487667 NSMFQ6X4W1 530 aa22.69■■□□□ 1.22
PHF1-209ENST00000487667 DYMQ7RTS9 669 aa22.69■■□□□ 1.22
PHF1-209ENST00000487667 GPBP1Q86WP2 473 aa22.69■■□□□ 1.22
PHF1-209ENST00000487667 DNAJC19Q96DA6 116 aa22.69■■□□□ 1.22
PHF1-209ENST00000487667 HSD17B14Q9BPX1 270 aa22.69■■□□□ 1.22
PHF1-209ENST00000487667 FBXO40Q9UH90 709 aa22.69■■□□□ 1.22
PHF1-209ENST00000487667 A0A0G2JLL6 359 aaPredicted RBP22.68■■□□□ 1.22
PHF1-209ENST00000487667 STAM2O75886 525 aa22.68■■□□□ 1.22
PHF1-209ENST00000487667 EYA4O95677 639 aa22.68■■□□□ 1.22
PHF1-209ENST00000487667 SSBP05455 408 aaKnown RBP eCLIP22.68■■□□□ 1.22
PHF1-209ENST00000487667 KRT18P05783 430 aaKnown RBP22.68■■□□□ 1.22
PHF1-209ENST00000487667 SFPQP23246 707 aaKnown RBP eCLIP22.68■■□□□ 1.22
PHF1-209ENST00000487667 SLC12A3P55017 1021 aa22.68■■□□□ 1.22
PHF1-209ENST00000487667 PPIL2Q13356 520 aa22.68■■□□□ 1.22
PHF1-209ENST00000487667 TMEM132BQ14DG7 1078 aa22.68■■□□□ 1.22
PHF1-209ENST00000487667 PGM5Q15124 567 aa22.68■■□□□ 1.22
PHF1-209ENST00000487667 PRRT2Q7Z6L0 340 aaPredicted RBP22.68■■□□□ 1.22
PHF1-209ENST00000487667 TRIM47Q96LD4 638 aa22.68■■□□□ 1.22
PHF1-209ENST00000487667 PXMP2Q9NR77 195 aa22.68■■□□□ 1.22
PHF1-209ENST00000487667 PANK4Q9NVE7 773 aa22.68■■□□□ 1.22
PHF1-209ENST00000487667 MAGEC2Q9UBF1 373 aaPredicted RBP22.68■■□□□ 1.22
PHF1-209ENST00000487667 POTEFA5A3E0 1075 aa22.67■■□□□ 1.22
PHF1-209ENST00000487667 POTEIP0CG38 1075 aa22.67■■□□□ 1.22
PHF1-209ENST00000487667 TTLL12Q14166 644 aaPredicted RBP22.67■■□□□ 1.22
PHF1-209ENST00000487667 SPECC1LQ69YQ0 1117 aa22.67■■□□□ 1.22
PHF1-209ENST00000487667 POTEGQ6S5H5 508 aa22.67■■□□□ 1.22
PHF1-209ENST00000487667 POTEEQ6S8J3 1075 aa22.67■■□□□ 1.22
PHF1-209ENST00000487667 KIAA1524Q8TCG1 905 aa22.67■■□□□ 1.22
PHF1-209ENST00000487667 NSUN6Q8TEA1 469 aaKnown RBP22.67■■□□□ 1.22
PHF1-209ENST00000487667 PDCD2LQ9BRP1 358 aa22.67■■□□□ 1.22
PHF1-209ENST00000487667 KCNH7Q9NS40 1196 aa22.67■■□□□ 1.22
PHF1-209ENST00000487667 KCND2Q9NZV8 630 aa22.67■■□□□ 1.22
PHF1-209ENST00000487667 TCEAL9Q9UHQ7 104 aa22.67■■□□□ 1.22
PHF1-209ENST00000487667 OTOFQ9HC10 1997 aa22.67■■□□□ 1.22
PHF1-209ENST00000487667 POTEJP0CG39 1038 aa22.67■■□□□ 1.22
PHF1-209ENST00000487667 ARP10275 920 aa22.67■■□□□ 1.22
PHF1-209ENST00000487667 ITGB5P18084 799 aa22.67■■□□□ 1.22
PHF1-209ENST00000487667 CYP11B2P19099 503 aa22.67■■□□□ 1.22
PHF1-209ENST00000487667 CCND2P30279 289 aa22.67■■□□□ 1.22
PHF1-209ENST00000487667 LRRC63Q05C16 580 aa22.67■■□□□ 1.22
PHF1-209ENST00000487667 PABPC4Q13310 644 aaKnown RBP eCLIP22.67■■□□□ 1.221e-6■□□□□ 9.5
PHF1-209ENST00000487667 MTMR1Q13613 665 aa22.67■■□□□ 1.22
PHF1-209ENST00000487667 TCP11X2Q5H9J9 407 aa22.67■■□□□ 1.22
PHF1-209ENST00000487667 TTI2Q6NXR4 508 aa22.67■■□□□ 1.22
PHF1-209ENST00000487667 B3GNT9Q6UX72 402 aa22.67■■□□□ 1.22
PHF1-209ENST00000487667 CCDC112Q8NEF3 446 aa22.67■■□□□ 1.22
PHF1-209ENST00000487667 CACTINQ8WUQ7 758 aaKnown RBP22.67■■□□□ 1.22
PHF1-209ENST00000487667 NACC1Q96RE7 527 aa22.67■■□□□ 1.22
PHF1-209ENST00000487667 TAAR1Q96RJ0 339 aa22.67■■□□□ 1.22
PHF1-209ENST00000487667 ADD3Q9UEY8 706 aaKnown RBP22.67■■□□□ 1.22
PHF1-209ENST00000487667 KCNH4Q9UQ05 1017 aa22.67■■□□□ 1.22
PHF1-209ENST00000487667 MAPK8IP1Q9UQF2 711 aa22.67■■□□□ 1.22
PHF1-209ENST00000487667 FRMD3A2A2Y4 597 aa22.66■■□□□ 1.22
PHF1-209ENST00000487667 BAATQ14032 418 aaPredicted RBP22.66■■□□□ 1.22
PHF1-209ENST00000487667 CENPPQ6IPU0 288 aa22.66■■□□□ 1.22
PHF1-209ENST00000487667 SLC30A10Q6XR72 485 aa22.66■■□□□ 1.22
PHF1-209ENST00000487667 LBX2Q6XYB7 198 aa22.66■■□□□ 1.22
PHF1-209ENST00000487667 NLRX1Q86UT6 975 aa22.66■■□□□ 1.22
PHF1-209ENST00000487667 ZNF526Q8TF50 670 aaPredicted RBP22.66■■□□□ 1.22
PHF1-209ENST00000487667 LOC285556D6RIA3 1793 aa22.66■■□□□ 1.22
PHF1-209ENST00000487667 KCNJ18B7U540 433 aa22.65■■□□□ 1.22
PHF1-209ENST00000487667 COPB2P35606 906 aa22.65■■□□□ 1.22
PHF1-209ENST00000487667 COASYQ13057 564 aa22.65■■□□□ 1.22
PHF1-209ENST00000487667 KCNJ12Q14500 433 aa22.65■■□□□ 1.22
PHF1-209ENST00000487667 FAM26FQ5R3K3 315 aa22.65■■□□□ 1.22
PHF1-209ENST00000487667 FASTKD5Q7L8L6 764 aaKnown RBP22.65■■□□□ 1.22
PHF1-209ENST00000487667 CSGALNACT2Q8N6G5 542 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms