RNA–Protein interactions for RNA: ENST00000487462.1

CDK11A-217, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 437 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-217ENST00000487462 PCDHGC5Q9Y5F6 944 aa11.33□□□□□ -0.6
CDK11A-217ENST00000487462 CSPG5O95196 566 aa11.32□□□□□ -0.6
CDK11A-217ENST00000487462 PDE6AP16499 860 aa11.32□□□□□ -0.6
CDK11A-217ENST00000487462 MUM1L1Q5H9M0 696 aa11.32□□□□□ -0.6
CDK11A-217ENST00000487462 PARP9Q8IXQ6 854 aa11.32□□□□□ -0.6
CDK11A-217ENST00000487462 DBF4BQ8NFT6 615 aa11.32□□□□□ -0.6
CDK11A-217ENST00000487462 COPS5Q92905 334 aa11.32□□□□□ -0.6
CDK11A-217ENST00000487462 TRERF1Q96PN7 1200 aa11.32□□□□□ -0.6
CDK11A-217ENST00000487462 C11orf84Q9BUA3 381 aaPredicted RBP11.32□□□□□ -0.6
CDK11A-217ENST00000487462 FAM217BQ9NTX9 383 aaPredicted RBP11.32□□□□□ -0.6
CDK11A-217ENST00000487462 FEM1BQ9UK73 627 aa11.32□□□□□ -0.6
CDK11A-217ENST00000487462 RAD50Q92878 1312 aa11.32□□□□□ -0.6
CDK11A-217ENST00000487462 TCRBV5S4A2TA0A5A2 114 aa11.31□□□□□ -0.6
CDK11A-217ENST00000487462 PRKAB2O43741 272 aa11.31□□□□□ -0.6
CDK11A-217ENST00000487462 UPP2O95045 317 aa11.31□□□□□ -0.6
CDK11A-217ENST00000487462 MMP1P03956 469 aa11.31□□□□□ -0.6
CDK11A-217ENST00000487462 BRDTQ58F21 947 aaPredicted RBP11.31□□□□□ -0.6
CDK11A-217ENST00000487462 ADGRD2Q7Z7M1 963 aa11.31□□□□□ -0.6
CDK11A-217ENST00000487462 EFHBQ8N7U6 833 aa11.31□□□□□ -0.6
CDK11A-217ENST00000487462 SUSD6Q92537 303 aa11.31□□□□□ -0.6
CDK11A-217ENST00000487462 KAT2BQ92831 832 aa11.31□□□□□ -0.6
CDK11A-217ENST00000487462 NYAP2Q9P242 653 aa11.31□□□□□ -0.6
CDK11A-217ENST00000487462 BARX2Q9UMQ3 279 aaPredicted RBP11.31□□□□□ -0.6
CDK11A-217ENST00000487462 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.3□□□□□ -0.6
CDK11A-217ENST00000487462 RB1P06400 928 aa11.3□□□□□ -0.6
CDK11A-217ENST00000487462 ARP10275 920 aa11.3□□□□□ -0.6
CDK11A-217ENST00000487462 ATF7P17544 494 aaPredicted RBP11.3□□□□□ -0.6
CDK11A-217ENST00000487462 BMPR1AP36894 532 aa11.3□□□□□ -0.6
CDK11A-217ENST00000487462 PPP2R5BQ15173 497 aa11.3□□□□□ -0.6
CDK11A-217ENST00000487462 TKFCQ3LXA3 575 aa11.3□□□□□ -0.6
CDK11A-217ENST00000487462 PLEKHG4Q58EX7 1191 aa11.3□□□□□ -0.6
CDK11A-217ENST00000487462 TMUB1Q9BVT8 246 aa11.3□□□□□ -0.6
CDK11A-217ENST00000487462 ARMT1Q9H993 441 aa11.3□□□□□ -0.6
CDK11A-217ENST00000487462 GTF2IRD1Q9UHL9 959 aa11.3□□□□□ -0.6
CDK11A-217ENST00000487462 EMSYQ7Z589 1322 aa11.3□□□□□ -0.6
CDK11A-217ENST00000487462 ZNF532Q9HCE3 1301 aa11.3□□□□□ -0.6
CDK11A-217ENST00000487462 FANCMQ8IYD8 2048 aa11.3□□□□□ -0.6
CDK11A-217ENST00000487462 ZFYVE26Q68DK2 2539 aa11.29□□□□□ -0.6
CDK11A-217ENST00000487462 NKRFO15226 690 aaKnown RBP eCLIP11.29□□□□□ -0.6
CDK11A-217ENST00000487462 BRD1O95696 1058 aa11.29□□□□□ -0.6
CDK11A-217ENST00000487462 GNAI3P08754 354 aa11.29□□□□□ -0.6
CDK11A-217ENST00000487462 ALAS1P13196 640 aa11.29□□□□□ -0.6
CDK11A-217ENST00000487462 DNAJB1P25685 340 aa11.29□□□□□ -0.6
CDK11A-217ENST00000487462 ALDH5A1P51649 535 aaPredicted RBP11.29□□□□□ -0.6
CDK11A-217ENST00000487462 PTK7Q13308 1070 aa11.29□□□□□ -0.6
CDK11A-217ENST00000487462 ALDH1L2Q3SY69 923 aa11.29□□□□□ -0.6
CDK11A-217ENST00000487462 SLC9C2Q5TAH2 1124 aa11.29□□□□□ -0.6
CDK11A-217ENST00000487462 LRRC47Q8N1G4 583 aaKnown RBP11.29□□□□□ -0.6
CDK11A-217ENST00000487462 FIBCD1Q8N539 461 aa11.29□□□□□ -0.6
CDK11A-217ENST00000487462 KREMEN2Q8NCW0 462 aa11.29□□□□□ -0.6
CDK11A-217ENST00000487462 CLP1Q92989 425 aaKnown RBP11.29□□□□□ -0.6
CDK11A-217ENST00000487462 IFIH1Q9BYX4 1025 aaKnown RBP11.29□□□□□ -0.6
CDK11A-217ENST00000487462 CCDC8Q9H0W5 538 aaPredicted RBP11.29□□□□□ -0.6
CDK11A-217ENST00000487462 SMOC2Q9H3U7 446 aa11.29□□□□□ -0.6
CDK11A-217ENST00000487462 SMC4Q9NTJ3 1288 aa11.29□□□□□ -0.6
CDK11A-217ENST00000487462 GPR179Q6PRD1 2367 aa11.29□□□□□ -0.6
CDK11A-217ENST00000487462 PLXNA4Q9HCM2 1894 aa11.28□□□□□ -0.6
CDK11A-217ENST00000487462 IGKV6D-41A0A0C4DH26 115 aa11.28□□□□□ -0.6
CDK11A-217ENST00000487462 ARIH2O95376 493 aa11.28□□□□□ -0.6
CDK11A-217ENST00000487462 LMNAP02545 664 aaKnown RBP11.28□□□□□ -0.6
CDK11A-217ENST00000487462 FDX1P10109 184 aa11.28□□□□□ -0.6
CDK11A-217ENST00000487462 CD46P15529 392 aa11.28□□□□□ -0.6
CDK11A-217ENST00000487462 NSMFQ6X4W1 530 aa11.28□□□□□ -0.6
CDK11A-217ENST00000487462 ZBTB33Q86T24 672 aa11.28□□□□□ -0.6
CDK11A-217ENST00000487462 RPAP2Q8IXW5 612 aaPredicted RBP11.28□□□□□ -0.6
CDK11A-217ENST00000487462 OSBPL7Q9BZF2 842 aa11.28□□□□□ -0.6
CDK11A-217ENST00000487462 RC3H2Q9HBD1 1191 aaKnown RBP11.28□□□□□ -0.6
CDK11A-217ENST00000487462 ATP8A2Q9NTI2 1148 aa11.28□□□□□ -0.6
CDK11A-217ENST00000487462 HDAC6Q9UBN7 1215 aa11.28□□□□□ -0.6
CDK11A-217ENST00000487462 NOB1Q9ULX3 412 aaKnown RBP11.28□□□□□ -0.6
CDK11A-217ENST00000487462 ACTN4O43707 911 aaKnown RBP11.27□□□□□ -0.61
CDK11A-217ENST00000487462 MMP3P08254 477 aa11.27□□□□□ -0.61
CDK11A-217ENST00000487462 PRKCSHP14314 528 aaPredicted RBP11.27□□□□□ -0.61
CDK11A-217ENST00000487462 RASA1P20936 1047 aa11.27□□□□□ -0.61
CDK11A-217ENST00000487462 NRIP1P48552 1158 aa11.27□□□□□ -0.61
CDK11A-217ENST00000487462 CLCN5P51795 746 aa11.27□□□□□ -0.61
CDK11A-217ENST00000487462 RBM10P98175 930 aaKnown RBP11.27□□□□□ -0.61
CDK11A-217ENST00000487462 ZNF200P98182 395 aaPredicted RBP11.27□□□□□ -0.61
CDK11A-217ENST00000487462 MTMR3Q13615 1198 aa11.27□□□□□ -0.61
CDK11A-217ENST00000487462 ANGPT1Q15389 498 aa11.27□□□□□ -0.61
CDK11A-217ENST00000487462 RSPO4Q2I0M5 234 aaPredicted RBP11.27□□□□□ -0.61
CDK11A-217ENST00000487462 CWF19L1Q69YN2 538 aaKnown RBP11.27□□□□□ -0.61
CDK11A-217ENST00000487462 UBALD2Q8IYN6 164 aa11.27□□□□□ -0.61
CDK11A-217ENST00000487462 GMCL1P1Q8NEA9 526 aa11.27□□□□□ -0.61
CDK11A-217ENST00000487462 VN1R2Q8NFZ6 395 aa11.27□□□□□ -0.61
CDK11A-217ENST00000487462 KCNG4Q8TDN1 519 aa11.27□□□□□ -0.61
CDK11A-217ENST00000487462 SCFD2Q8WU76 684 aa11.27□□□□□ -0.61
CDK11A-217ENST00000487462 AFG1LQ8WV93 481 aa11.27□□□□□ -0.61
CDK11A-217ENST00000487462 EAF2Q96CJ1 260 aaPredicted RBP11.27□□□□□ -0.61
CDK11A-217ENST00000487462 IL17RAQ96F46 866 aa11.27□□□□□ -0.61
CDK11A-217ENST00000487462 CLIP2Q9UDT6 1046 aa11.27□□□□□ -0.61
CDK11A-217ENST00000487462 PLAGL2Q9UPG8 496 aa11.27□□□□□ -0.61
CDK11A-217ENST00000487462 RWDD3Q9Y3V2 267 aa11.27□□□□□ -0.61
CDK11A-217ENST00000487462 PCDHB3Q9Y5E6 796 aa11.27□□□□□ -0.61
CDK11A-217ENST00000487462 ZBED9Q6R2W3 1325 aa11.27□□□□□ -0.61
CDK11A-217ENST00000487462 KIAA1217Q5T5P2 1943 aa11.27□□□□□ -0.61
CDK11A-217ENST00000487462 LOC102724159A0A0B4J2E5 919 aa11.26□□□□□ -0.61
CDK11A-217ENST00000487462 TMEM232C9JQI7 657 aa11.26□□□□□ -0.61
CDK11A-217ENST00000487462 MBD4O95243 580 aa11.26□□□□□ -0.61
CDK11A-217ENST00000487462 BMP3P12645 472 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms