RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 PSMC6P62333 389 aa8.25□□□□□ -1.09
UBE4B-209ENST00000487244 TLE2Q04725 743 aa8.25□□□□□ -1.09
UBE4B-209ENST00000487244 PPP2R5BQ15173 497 aa8.25□□□□□ -1.09
UBE4B-209ENST00000487244 LY6KQ17RY6 165 aa8.25□□□□□ -1.09
UBE4B-209ENST00000487244 PUS10Q3MIT2 529 aaKnown RBP8.25□□□□□ -1.09
UBE4B-209ENST00000487244 CCDC62Q6P9F0 684 aa8.25□□□□□ -1.09
UBE4B-209ENST00000487244 FBXL16Q8N461 479 aa8.25□□□□□ -1.09
UBE4B-209ENST00000487244 OR6J1Q8NGC5 347 aa8.25□□□□□ -1.09
UBE4B-209ENST00000487244 SCFD2Q8WU76 684 aa8.25□□□□□ -1.09
UBE4B-209ENST00000487244 PPP1R13LQ8WUF5 828 aa8.25□□□□□ -1.09
UBE4B-209ENST00000487244 IWS1Q96ST2 819 aa8.25□□□□□ -1.09
UBE4B-209ENST00000487244 MAF1Q9H063 256 aa8.25□□□□□ -1.09
UBE4B-209ENST00000487244 AP5M1Q9H0R1 490 aa8.25□□□□□ -1.09
UBE4B-209ENST00000487244 PRO3102Q9H379 93 aa8.25□□□□□ -1.09
UBE4B-209ENST00000487244 SPC25Q9HBM1 224 aa8.25□□□□□ -1.09
UBE4B-209ENST00000487244 STARD7Q9NQZ5 370 aa8.25□□□□□ -1.09
UBE4B-209ENST00000487244 PDLIM7Q9NR12 457 aa8.25□□□□□ -1.09
UBE4B-209ENST00000487244 RBM28Q9NW13 759 aaKnown RBP8.25□□□□□ -1.09
UBE4B-209ENST00000487244 CYP46A1Q9Y6A2 500 aa8.25□□□□□ -1.09
UBE4B-209ENST00000487244 V9GY48 417 aaPredicted RBP8.25□□□□□ -1.09
UBE4B-209ENST00000487244 GRIN2DO15399 1336 aa8.25□□□□□ -1.09
UBE4B-209ENST00000487244 TRIP12Q14669 1992 aaPredicted RBP8.24□□□□□ -1.09
UBE4B-209ENST00000487244 TRIM43BA6NCK2 446 aa8.24□□□□□ -1.09
UBE4B-209ENST00000487244 STXBP3O00186 592 aa8.24□□□□□ -1.09
UBE4B-209ENST00000487244 PIK3CDO00329 1044 aa8.24□□□□□ -1.09
UBE4B-209ENST00000487244 TRIM66O15016 1216 aa8.24□□□□□ -1.09
UBE4B-209ENST00000487244 EIF3JO75822 258 aaKnown RBP8.24□□□□□ -1.09
UBE4B-209ENST00000487244 ITGB8P26012 769 aa8.24□□□□□ -1.09
UBE4B-209ENST00000487244 PDIA3P30101 505 aaKnown RBP8.24□□□□□ -1.09
UBE4B-209ENST00000487244 RCAN1P53805 252 aa8.24□□□□□ -1.09
UBE4B-209ENST00000487244 EVCP57679 992 aa8.24□□□□□ -1.09
UBE4B-209ENST00000487244 CCT2P78371 535 aaKnown RBP8.24□□□□□ -1.09
UBE4B-209ENST00000487244 MRPS9P82933 396 aaKnown RBP8.24□□□□□ -1.09
UBE4B-209ENST00000487244 ARHGAP1Q07960 439 aa8.24□□□□□ -1.09
UBE4B-209ENST00000487244 TRAF1Q13077 416 aa8.24□□□□□ -1.09
UBE4B-209ENST00000487244 SEMA3FQ13275 785 aa8.24□□□□□ -1.09
UBE4B-209ENST00000487244 STXBP2Q15833 593 aa8.24□□□□□ -1.09
UBE4B-209ENST00000487244 AMHR2Q16671 573 aa8.24□□□□□ -1.09
UBE4B-209ENST00000487244 C8orf34Q49A92 452 aa8.24□□□□□ -1.09
UBE4B-209ENST00000487244 C1orf53Q5VUE5 145 aa8.24□□□□□ -1.09
UBE4B-209ENST00000487244 VSIG10LQ86VR7 867 aa8.24□□□□□ -1.09
UBE4B-209ENST00000487244 SCUBE3Q8IX30 993 aa8.24□□□□□ -1.09
UBE4B-209ENST00000487244 PCSK9Q8NBP7 692 aaKnown RBP8.24□□□□□ -1.09
UBE4B-209ENST00000487244 SMARCC2Q8TAQ2 1214 aa8.24□□□□□ -1.09
UBE4B-209ENST00000487244 PHKBQ93100 1093 aa8.24□□□□□ -1.09
UBE4B-209ENST00000487244 TRIM43Q96BQ3 446 aaPredicted RBP8.24□□□□□ -1.09
UBE4B-209ENST00000487244 GLT1D1Q96MS3 346 aa8.24□□□□□ -1.09
UBE4B-209ENST00000487244 MPHOSPH6Q99547 160 aaKnown RBP8.24□□□□□ -1.09
UBE4B-209ENST00000487244 GDF15Q99988 308 aa8.24□□□□□ -1.09
UBE4B-209ENST00000487244 TMUB1Q9BVT8 246 aa8.24□□□□□ -1.09
UBE4B-209ENST00000487244 TM6SF1Q9BZW5 370 aa8.24□□□□□ -1.09
UBE4B-209ENST00000487244 BCAS3Q9H6U6 928 aa8.24□□□□□ -1.09
UBE4B-209ENST00000487244 PSTPIP2Q9H939 334 aa8.24□□□□□ -1.09
UBE4B-209ENST00000487244 SLC24A3Q9HC58 644 aa8.24□□□□□ -1.09
UBE4B-209ENST00000487244 PRDM5Q9NQX1 630 aaPredicted RBP8.24□□□□□ -1.09
UBE4B-209ENST00000487244 MAP3K20Q9NYL2 800 aaKnown RBP8.24□□□□□ -1.09
UBE4B-209ENST00000487244 Q9Y3F1 56 aa8.24□□□□□ -1.09
UBE4B-209ENST00000487244 SZT2Q5T011 3432 aa8.23□□□□□ -1.09
UBE4B-209ENST00000487244 A0A0U1RQG5 324 aaPredicted RBP8.23□□□□□ -1.09
UBE4B-209ENST00000487244 B4DLN1 442 aa8.23□□□□□ -1.09
UBE4B-209ENST00000487244 RBAK-RBAKDNI3L0D1 243 aa8.23□□□□□ -1.09
UBE4B-209ENST00000487244 CCND2P30279 289 aa8.23□□□□□ -1.09
UBE4B-209ENST00000487244 SSTR3P32745 418 aaPredicted RBP8.23□□□□□ -1.09
UBE4B-209ENST00000487244 GGCXP38435 758 aa8.23□□□□□ -1.09
UBE4B-209ENST00000487244 MRPL12P52815 198 aaKnown RBP8.23□□□□□ -1.09
UBE4B-209ENST00000487244 NAPAP54920 295 aa8.23□□□□□ -1.09
UBE4B-209ENST00000487244 PURAQ00577 322 aaKnown RBP8.23□□□□□ -1.09
UBE4B-209ENST00000487244 SP2Q02086 613 aa8.23□□□□□ -1.09
UBE4B-209ENST00000487244 STK3Q13188 491 aa8.23□□□□□ -1.09
UBE4B-209ENST00000487244 TTLL4Q14679 1199 aa8.23□□□□□ -1.09
UBE4B-209ENST00000487244 NTRK3Q16288 839 aa8.23□□□□□ -1.09
UBE4B-209ENST00000487244 PKN1Q16512 942 aa8.23□□□□□ -1.09
UBE4B-209ENST00000487244 HABP4Q5JVS0 413 aaKnown RBP8.23□□□□□ -1.09
UBE4B-209ENST00000487244 ANKRD33Q7Z3H0 272 aa8.23□□□□□ -1.09
UBE4B-209ENST00000487244 SAMD3Q8N6K7 520 aa8.23□□□□□ -1.09
UBE4B-209ENST00000487244 AFG1LQ8WV93 481 aa8.23□□□□□ -1.09
UBE4B-209ENST00000487244 VTI1AQ96AJ9 217 aa8.23□□□□□ -1.09
UBE4B-209ENST00000487244 PGBD1Q96JS3 809 aa8.23□□□□□ -1.09
UBE4B-209ENST00000487244 PDRG1Q9NUG6 133 aa8.23□□□□□ -1.09
UBE4B-209ENST00000487244 TMEM260Q9NX78 707 aa8.23□□□□□ -1.09
UBE4B-209ENST00000487244 RTEL1Q9NZ71 1219 aa8.23□□□□□ -1.09
UBE4B-209ENST00000487244 DDX41Q9UJV9 622 aaKnown RBP8.23□□□□□ -1.09
UBE4B-209ENST00000487244 TELO2Q9Y4R8 837 aa8.23□□□□□ -1.09
UBE4B-209ENST00000487244 MRVI1Q9Y6F6 885 aa8.23□□□□□ -1.09
UBE4B-209ENST00000487244 SCN5AQ14524 2016 aa8.23□□□□□ -1.09
UBE4B-209ENST00000487244 ELP1O95163 1332 aa8.23□□□□□ -1.09
UBE4B-209ENST00000487244 A6NJR5 290 aa8.22□□□□□ -1.09
UBE4B-209ENST00000487244 ARVCFO00192 962 aa8.22□□□□□ -1.09
UBE4B-209ENST00000487244 NKRFO15226 690 aaKnown RBP eCLIP8.22□□□□□ -1.09
UBE4B-209ENST00000487244 MMP3P08254 477 aa8.22□□□□□ -1.09
UBE4B-209ENST00000487244 MYL3P08590 195 aa8.22□□□□□ -1.09
UBE4B-209ENST00000487244 CLTBP09497 229 aa8.22□□□□□ -1.09
UBE4B-209ENST00000487244 SCG2P13521 617 aa8.22□□□□□ -1.09
UBE4B-209ENST00000487244 UBA1P22314 1058 aaKnown RBP8.22□□□□□ -1.09
UBE4B-209ENST00000487244 CPT1AP50416 773 aa8.22□□□□□ -1.09
UBE4B-209ENST00000487244 CDK7P50613 346 aa8.22□□□□□ -1.09
UBE4B-209ENST00000487244 ADCY7P51828 1080 aa8.22□□□□□ -1.09
UBE4B-209ENST00000487244 FAAP100Q0VG06 881 aa8.22□□□□□ -1.09
UBE4B-209ENST00000487244 ITGA7Q13683 1181 aa8.22□□□□□ -1.09
UBE4B-209ENST00000487244 PFKFB3Q16875 520 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms