RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 MTERF4Q7Z6M4 381 aaKnown RBP6.79□□□□□ -1.32
COPS3-209ENST00000486810 KRTAP1-3Q8IUG1 177 aa6.79□□□□□ -1.32
COPS3-209ENST00000486810 LRRC56Q8IYG6 542 aaPredicted RBP6.79□□□□□ -1.32
COPS3-209ENST00000486810 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.79□□□□□ -1.32
COPS3-209ENST00000486810 GSTCDQ8NEC7 633 aa6.79□□□□□ -1.32
COPS3-209ENST00000486810 ZSWIM2Q8NEG5 633 aa6.79□□□□□ -1.32
COPS3-209ENST00000486810 PIP4K2CQ8TBX8 421 aa6.79□□□□□ -1.32
COPS3-209ENST00000486810 SH3TC2Q8TF17 1288 aa6.79□□□□□ -1.32
COPS3-209ENST00000486810 DACT3Q96B18 629 aaPredicted RBP6.79□□□□□ -1.32
COPS3-209ENST00000486810 RNF38Q9H0F5 515 aa6.79□□□□□ -1.32
COPS3-209ENST00000486810 AP5M1Q9H0R1 490 aa6.79□□□□□ -1.32
COPS3-209ENST00000486810 ZNF652Q9Y2D9 606 aa6.79□□□□□ -1.32
COPS3-209ENST00000486810 PCDHA8Q9Y5H6 950 aa6.79□□□□□ -1.32
COPS3-209ENST00000486810 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.78□□□□□ -1.32
COPS3-209ENST00000486810 TCRBV5S2A0A599 114 aa6.78□□□□□ -1.32
COPS3-209ENST00000486810 C8BP07358 591 aa6.78□□□□□ -1.32
COPS3-209ENST00000486810 COL6A2P12110 1019 aa6.78□□□□□ -1.32
COPS3-209ENST00000486810 GABREP78334 506 aa6.78□□□□□ -1.32
COPS3-209ENST00000486810 FOXO4P98177 505 aa6.78□□□□□ -1.32
COPS3-209ENST00000486810 TRIM61Q5EBN2 209 aa6.78□□□□□ -1.32
COPS3-209ENST00000486810 STEAP3Q658P3 488 aa6.78□□□□□ -1.32
COPS3-209ENST00000486810 LCNL1Q6ZST4 164 aa6.78□□□□□ -1.32
COPS3-209ENST00000486810 OTOP3Q7RTS5 596 aa6.78□□□□□ -1.32
COPS3-209ENST00000486810 MILR1Q7Z6M3 343 aa6.78□□□□□ -1.32
COPS3-209ENST00000486810 AMIGO3Q86WK7 504 aa6.78□□□□□ -1.32
COPS3-209ENST00000486810 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.78□□□□□ -1.32
COPS3-209ENST00000486810 FAM26EQ8N5C1 309 aa6.78□□□□□ -1.32
COPS3-209ENST00000486810 ARRDC4Q8NCT1 418 aa6.78□□□□□ -1.32
COPS3-209ENST00000486810 CPA5Q8WXQ8 436 aa6.78□□□□□ -1.32
COPS3-209ENST00000486810 SCLYQ96I15 445 aa6.78□□□□□ -1.32
COPS3-209ENST00000486810 RNPC3Q96LT9 517 aaKnown RBP6.78□□□□□ -1.32
COPS3-209ENST00000486810 KCNJ15Q99712 375 aa6.78□□□□□ -1.32
COPS3-209ENST00000486810 SLC6A20Q9NP91 592 aa6.78□□□□□ -1.32
COPS3-209ENST00000486810 PCDHA9Q9Y5H5 950 aa6.78□□□□□ -1.32
COPS3-209ENST00000486810 TCRBV5S4A2TA0A5A2 114 aa6.77□□□□□ -1.33
COPS3-209ENST00000486810 ARVCFO00192 962 aa6.77□□□□□ -1.33
COPS3-209ENST00000486810 HGSO14964 777 aaPredicted RBP6.77□□□□□ -1.33
COPS3-209ENST00000486810 NKRFO15226 690 aaKnown RBP eCLIP6.77□□□□□ -1.33
COPS3-209ENST00000486810 DGKIO75912 1065 aa6.77□□□□□ -1.33
COPS3-209ENST00000486810 PFKLP17858 780 aa6.77□□□□□ -1.33
COPS3-209ENST00000486810 HTRA3P83110 453 aa6.77□□□□□ -1.33
COPS3-209ENST00000486810 CACNB2Q08289 660 aaPredicted RBP6.77□□□□□ -1.33
COPS3-209ENST00000486810 TARBP2Q15633 366 aaKnown RBP6.77□□□□□ -1.33
COPS3-209ENST00000486810 TSHZ1Q6ZSZ6 1077 aa6.77□□□□□ -1.33
COPS3-209ENST00000486810 B3GNT8Q7Z7M8 397 aa6.77□□□□□ -1.33
COPS3-209ENST00000486810 OTUD6BQ8N6M0 293 aa6.77□□□□□ -1.33
COPS3-209ENST00000486810 PCDH19Q8TAB3 1148 aa6.77□□□□□ -1.33
COPS3-209ENST00000486810 SMARCC2Q8TAQ2 1214 aa6.77□□□□□ -1.33
COPS3-209ENST00000486810 TOX2Q96NM4 488 aa6.77□□□□□ -1.33
COPS3-209ENST00000486810 IPO9Q96P70 1041 aaKnown RBP6.77□□□□□ -1.33
COPS3-209ENST00000486810 NOX5Q96PH1 765 aa6.77□□□□□ -1.33
COPS3-209ENST00000486810 GTPBP4Q9BZE4 634 aaKnown RBP6.77□□□□□ -1.33
COPS3-209ENST00000486810 IRF2BPLQ9H1B7 796 aa6.77□□□□□ -1.33
COPS3-209ENST00000486810 TELO2Q9Y4R8 837 aa6.77□□□□□ -1.33
COPS3-209ENST00000486810 AQP7O14520 342 aa6.76□□□□□ -1.33
COPS3-209ENST00000486810 WNT9AO14904 365 aa6.76□□□□□ -1.33
COPS3-209ENST00000486810 KCNQ2O43526 872 aa6.76□□□□□ -1.33
COPS3-209ENST00000486810 NUAK1O60285 661 aa6.76□□□□□ -1.33
COPS3-209ENST00000486810 CRTAMO95727 393 aa6.76□□□□□ -1.33
COPS3-209ENST00000486810 TERF1P54274 439 aa6.76□□□□□ -1.33
COPS3-209ENST00000486810 CNKSR3Q6P9H4 555 aa6.76□□□□□ -1.33
COPS3-209ENST00000486810 RBM12BQ8IXT5 1001 aaKnown RBP6.76□□□□□ -1.33
COPS3-209ENST00000486810 SH3RF2Q8TEC5 729 aa6.76□□□□□ -1.33
COPS3-209ENST00000486810 CLUHP3Q96NS8 147 aa6.76□□□□□ -1.33
COPS3-209ENST00000486810 PNNQ9H307 717 aaKnown RBP6.76□□□□□ -1.33
COPS3-209ENST00000486810 NCOA5Q9HCD5 579 aaKnown RBP6.76□□□□□ -1.33
COPS3-209ENST00000486810 TRIM39Q9HCM9 518 aa6.76□□□□□ -1.33
COPS3-209ENST00000486810 NDOR1Q9UHB4 597 aa6.76□□□□□ -1.33
COPS3-209ENST00000486810 ESYT3A0FGR9 886 aa6.75□□□□□ -1.33
COPS3-209ENST00000486810 SLC27A2O14975 620 aa6.75□□□□□ -1.33
COPS3-209ENST00000486810 LETM1O95202 739 aaPredicted RBP6.75□□□□□ -1.33
COPS3-209ENST00000486810 RASGRP1O95267 797 aa6.75□□□□□ -1.33
COPS3-209ENST00000486810 LTFP02788 710 aa6.75□□□□□ -1.33
COPS3-209ENST00000486810 STAT5AP42229 794 aa6.75□□□□□ -1.33
COPS3-209ENST00000486810 GUCY1A3Q02108 690 aa6.75□□□□□ -1.33
COPS3-209ENST00000486810 DLX2Q07687 328 aaPredicted RBP6.75□□□□□ -1.33
COPS3-209ENST00000486810 CCDC96Q2M329 555 aa6.75□□□□□ -1.33
COPS3-209ENST00000486810 CR1LQ2VPA4 569 aa6.75□□□□□ -1.33
COPS3-209ENST00000486810 ZNF385BQ569K4 471 aa6.75□□□□□ -1.33
COPS3-209ENST00000486810 ETV3LQ6ZN32 361 aa6.75□□□□□ -1.33
COPS3-209ENST00000486810 FGD2Q7Z6J4 655 aa6.75□□□□□ -1.33
COPS3-209ENST00000486810 MTDHQ86UE4 582 aaKnown RBP6.75□□□□□ -1.33
COPS3-209ENST00000486810 JAZF1Q86VZ6 243 aa6.75□□□□□ -1.33
COPS3-209ENST00000486810 FAM126BQ8IXS8 530 aa6.75□□□□□ -1.33
COPS3-209ENST00000486810 CLEC4DQ8WXI8 215 aa6.75□□□□□ -1.33
COPS3-209ENST00000486810 SMOC1Q9H4F8 434 aa6.75□□□□□ -1.33
COPS3-209ENST00000486810 TMEM260Q9NX78 707 aa6.75□□□□□ -1.33
COPS3-209ENST00000486810 RAI14Q9P0K7 980 aa6.75□□□□□ -1.33
COPS3-209ENST00000486810 MYOTQ9UBF9 498 aa6.75□□□□□ -1.33
COPS3-209ENST00000486810 ASH2LQ9UBL3 628 aa6.75□□□□□ -1.33
COPS3-209ENST00000486810 WASF3Q9UPY6 502 aa6.75□□□□□ -1.33
COPS3-209ENST00000486810 PCDHB4Q9Y5E5 795 aa6.75□□□□□ -1.33
COPS3-209ENST00000486810 CCDC163A0A0D9SF12 145 aa6.74□□□□□ -1.33
COPS3-209ENST00000486810 FAM47E-STBD1D6RA91 191 aa6.74□□□□□ -1.33
COPS3-209ENST00000486810 PPP1R12AO14974 1030 aaPredicted RBP6.74□□□□□ -1.33
COPS3-209ENST00000486810 CKMP06732 381 aa6.74□□□□□ -1.33
COPS3-209ENST00000486810 KCNA6P17658 529 aa6.74□□□□□ -1.33
COPS3-209ENST00000486810 PAK1Q13153 545 aa6.74□□□□□ -1.33
COPS3-209ENST00000486810 CHRNA2Q15822 529 aa6.74□□□□□ -1.33
COPS3-209ENST00000486810 VMACQ2NL98 169 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms