RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 BAG4O95429 457 aaKnown RBP14.47□□□□□ -0.09
HDAC6-229ENST00000486665 NCLP19338 710 aaKnown RBP14.47□□□□□ -0.09
HDAC6-229ENST00000486665 ACVR2BQ13705 512 aa14.47□□□□□ -0.09
HDAC6-229ENST00000486665 IL17AQ16552 155 aa14.47□□□□□ -0.09
HDAC6-229ENST00000486665 TMEM63BQ5T3F8 832 aa14.47□□□□□ -0.09
HDAC6-229ENST00000486665 NLRX1Q86UT6 975 aa14.47□□□□□ -0.09
HDAC6-229ENST00000486665 LINC00301Q8NCQ3 95 aa14.47□□□□□ -0.09
HDAC6-229ENST00000486665 TRPV1Q8NER1 839 aa14.47□□□□□ -0.09
HDAC6-229ENST00000486665 ETNPPLQ8TBG4 499 aa14.47□□□□□ -0.09
HDAC6-229ENST00000486665 BCAS3Q9H6U6 928 aa14.47□□□□□ -0.09
HDAC6-229ENST00000486665 GDPD2Q9HCC8 539 aa14.47□□□□□ -0.09
HDAC6-229ENST00000486665 AGO4Q9HCK5 861 aaKnown RBP14.47□□□□□ -0.09
HDAC6-229ENST00000486665 KCNH7Q9NS40 1196 aa14.47□□□□□ -0.09
HDAC6-229ENST00000486665 POLR3EQ9NVU0 708 aa14.47□□□□□ -0.09
HDAC6-229ENST00000486665 RCOR1Q9UKL0 485 aa14.47□□□□□ -0.09
HDAC6-229ENST00000486665 CFAP45Q9UL16 551 aa14.47□□□□□ -0.09
HDAC6-229ENST00000486665 RBM47A0AV96 593 aaKnown RBP14.46□□□□□ -0.09
HDAC6-229ENST00000486665 ARIH2O95376 493 aa14.46□□□□□ -0.09
HDAC6-229ENST00000486665 ZNF865P0CJ78 1059 aaPredicted RBP14.46□□□□□ -0.09
HDAC6-229ENST00000486665 ICAM3P32942 547 aa14.46□□□□□ -0.09
HDAC6-229ENST00000486665 KRT85P78386 507 aa14.46□□□□□ -0.09
HDAC6-229ENST00000486665 ATP2C1P98194 919 aaPredicted RBP14.46□□□□□ -0.09
HDAC6-229ENST00000486665 SP2Q02086 613 aa14.46□□□□□ -0.09
HDAC6-229ENST00000486665 ORC2Q13416 577 aaPredicted RBP14.46□□□□□ -0.09
HDAC6-229ENST00000486665 MTMR1Q13613 665 aa14.46□□□□□ -0.09
HDAC6-229ENST00000486665 SLC39A14Q15043 492 aa14.46□□□□□ -0.09
HDAC6-229ENST00000486665 CALCRLQ16602 461 aa14.46□□□□□ -0.09
HDAC6-229ENST00000486665 TDHQ8IZJ6 230 aa14.46□□□□□ -0.09
HDAC6-229ENST00000486665 LEO1Q8WVC0 666 aaPredicted RBP14.46□□□□□ -0.09
HDAC6-229ENST00000486665 GPRASP2Q96D09 838 aa14.46□□□□□ -0.09
HDAC6-229ENST00000486665 VTA1Q9NP79 307 aa14.46□□□□□ -0.09
HDAC6-229ENST00000486665 KCNMB3Q9NPA1 279 aa14.46□□□□□ -0.09
HDAC6-229ENST00000486665 PKD2L1Q9P0L9 805 aa14.46□□□□□ -0.09
HDAC6-229ENST00000486665 DLL1O00548 723 aa14.45□□□□□ -0.1
HDAC6-229ENST00000486665 FIBPO43427 364 aa14.45□□□□□ -0.1
HDAC6-229ENST00000486665 YEATS4O95619 227 aa14.45□□□□□ -0.1
HDAC6-229ENST00000486665 PTGS1P23219 599 aa14.45□□□□□ -0.1
HDAC6-229ENST00000486665 MARCKSP29966 332 aaPredicted RBP14.45□□□□□ -0.1
HDAC6-229ENST00000486665 MDM2Q00987 491 aaPredicted RBP14.45□□□□□ -0.1
HDAC6-229ENST00000486665 ITGB3BPQ13352 177 aaPredicted RBP14.45□□□□□ -0.1
HDAC6-229ENST00000486665 STK38Q15208 465 aa14.45□□□□□ -0.1
HDAC6-229ENST00000486665 LY6KQ17RY6 165 aa14.45□□□□□ -0.1
HDAC6-229ENST00000486665 LRIT3Q3SXY7 679 aa14.45□□□□□ -0.1
HDAC6-229ENST00000486665 GNPTABQ3T906 1256 aa14.45□□□□□ -0.1
HDAC6-229ENST00000486665 MFSD14CQ5VZR4 134 aa14.45□□□□□ -0.1
HDAC6-229ENST00000486665 CCDC62Q6P9F0 684 aa14.45□□□□□ -0.1
HDAC6-229ENST00000486665 TRMT44Q8IYL2 757 aaKnown RBP14.45□□□□□ -0.1
HDAC6-229ENST00000486665 DEFB123Q8N688 67 aa14.45□□□□□ -0.1
HDAC6-229ENST00000486665 SLC5A5Q92911 643 aa14.45□□□□□ -0.1
HDAC6-229ENST00000486665 ZNF577Q9BSK1 485 aa14.45□□□□□ -0.1
HDAC6-229ENST00000486665 UBE2OQ9C0C9 1292 aaKnown RBP14.45□□□□□ -0.1
HDAC6-229ENST00000486665 ABHD16BQ9H3Z7 469 aa14.45□□□□□ -0.1
HDAC6-229ENST00000486665 DDX41Q9UJV9 622 aaKnown RBP14.45□□□□□ -0.1
HDAC6-229ENST00000486665 ZHX1Q9UKY1 873 aaPredicted RBP14.45□□□□□ -0.1
HDAC6-229ENST00000486665 CEP131Q9UPN4 1083 aa14.45□□□□□ -0.1
HDAC6-229ENST00000486665 LTBP2Q14767 1821 aa14.45□□□□□ -0.1
HDAC6-229ENST00000486665 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.44□□□□□ -0.1
HDAC6-229ENST00000486665 SPTLC2O15270 562 aa14.44□□□□□ -0.1
HDAC6-229ENST00000486665 MAFGO15525 162 aa14.44□□□□□ -0.1
HDAC6-229ENST00000486665 DHX15O43143 795 aaKnown RBP14.44□□□□□ -0.1
HDAC6-229ENST00000486665 OR52Z1P0C646 297 aa14.44□□□□□ -0.1
HDAC6-229ENST00000486665 KCNA2P16389 499 aa14.44□□□□□ -0.1
HDAC6-229ENST00000486665 ADCYAP1R1P41586 468 aa14.44□□□□□ -0.1
HDAC6-229ENST00000486665 TXKP42681 527 aa14.44□□□□□ -0.1
HDAC6-229ENST00000486665 SETQ01105 290 aaPredicted RBP14.44□□□□□ -0.1
HDAC6-229ENST00000486665 GRIN1Q05586 938 aa14.44□□□□□ -0.1
HDAC6-229ENST00000486665 CLEC17AQ6ZS10 378 aa14.44□□□□□ -0.1
HDAC6-229ENST00000486665 COPS5Q92905 334 aa14.44□□□□□ -0.1
HDAC6-229ENST00000486665 FAM20AQ96MK3 541 aa14.44□□□□□ -0.1
HDAC6-229ENST00000486665 TELO2Q9Y4R8 837 aa14.44□□□□□ -0.1
HDAC6-229ENST00000486665 LRRC37A2A6NM11 1700 aa14.44□□□□□ -0.1
HDAC6-229ENST00000486665 IPO5O00410 1097 aaKnown RBP14.43□□□□□ -0.1
HDAC6-229ENST00000486665 TBX3O15119 743 aa14.43□□□□□ -0.1
HDAC6-229ENST00000486665 MARCH6O60337 910 aa14.43□□□□□ -0.1
HDAC6-229ENST00000486665 SORBS3O60504 671 aa14.43□□□□□ -0.1
HDAC6-229ENST00000486665 BMP15O95972 392 aa14.43□□□□□ -0.1
HDAC6-229ENST00000486665 CCDC144BQ3MJ40 725 aa14.43□□□□□ -0.1
HDAC6-229ENST00000486665 GJC2Q5T442 439 aaPredicted RBP14.43□□□□□ -0.1
HDAC6-229ENST00000486665 CDHR1Q96JP9 859 aa14.43□□□□□ -0.1
HDAC6-229ENST00000486665 SPATA32Q96LK8 384 aa14.43□□□□□ -0.1
HDAC6-229ENST00000486665 CLIC6Q96NY7 704 aa14.43□□□□□ -0.1
HDAC6-229ENST00000486665 SCAND2PQ9GZW5 306 aaPredicted RBP14.43□□□□□ -0.1
HDAC6-229ENST00000486665 MTMR10Q9NXD2 777 aa14.43□□□□□ -0.1
HDAC6-229ENST00000486665 FBXO2Q9UK22 296 aaPredicted RBP14.43□□□□□ -0.1
HDAC6-229ENST00000486665 MORC2Q9Y6X9 1032 aaPredicted RBP14.43□□□□□ -0.1
HDAC6-229ENST00000486665 EYSQ5T1H1 3165 aa14.43□□□□□ -0.1
HDAC6-229ENST00000486665 MYH15Q9Y2K3 1946 aa14.43□□□□□ -0.1
HDAC6-229ENST00000486665 MCM3APO60318 1980 aa14.42□□□□□ -0.1
HDAC6-229ENST00000486665 LAD1O00515 517 aa14.42□□□□□ -0.1
HDAC6-229ENST00000486665 ADCY6O43306 1168 aa14.42□□□□□ -0.1
HDAC6-229ENST00000486665 PPP6R2O75170 966 aa14.42□□□□□ -0.1
HDAC6-229ENST00000486665 PSMD10O75832 226 aa14.42□□□□□ -0.1
HDAC6-229ENST00000486665 TXNP10599 105 aaKnown RBP14.42□□□□□ -0.1
HDAC6-229ENST00000486665 TGFB3P10600 412 aa14.42□□□□□ -0.1
HDAC6-229ENST00000486665 CYBAP13498 195 aa14.42□□□□□ -0.1
HDAC6-229ENST00000486665 SMPD1P17405 629 aa14.42□□□□□ -0.1
HDAC6-229ENST00000486665 UBA1P22314 1058 aaKnown RBP14.42□□□□□ -0.1
HDAC6-229ENST00000486665 PRPHP41219 470 aa14.42□□□□□ -0.1
HDAC6-229ENST00000486665 TECP42680 631 aa14.42□□□□□ -0.1
HDAC6-229ENST00000486665 ATN1P54259 1190 aaPredicted RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms