RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.61□□□□□ -0.39
SNX21-211ENST00000486336 H3BRB1 525 aa12.61□□□□□ -0.39
SNX21-211ENST00000486336 ATP9AO75110 1047 aa12.61□□□□□ -0.39
SNX21-211ENST00000486336 F2P00734 622 aa12.61□□□□□ -0.39
SNX21-211ENST00000486336 LGALS2P05162 132 aa12.61□□□□□ -0.39
SNX21-211ENST00000486336 IFNAR1P17181 557 aa12.61□□□□□ -0.39
SNX21-211ENST00000486336 ZNF200P98182 395 aaPredicted RBP12.61□□□□□ -0.39
SNX21-211ENST00000486336 NTRK3Q16288 839 aa12.61□□□□□ -0.39
SNX21-211ENST00000486336 PKN1Q16512 942 aa12.61□□□□□ -0.39
SNX21-211ENST00000486336 GPR153Q6NV75 609 aa12.61□□□□□ -0.39
SNX21-211ENST00000486336 OTOP2Q7RTS6 562 aa12.61□□□□□ -0.39
SNX21-211ENST00000486336 TRIM22Q8IYM9 498 aa12.61□□□□□ -0.39
SNX21-211ENST00000486336 CCDC155Q8N6L0 562 aa12.61□□□□□ -0.39
SNX21-211ENST00000486336 GIMAP8Q8ND71 665 aaPredicted RBP12.61□□□□□ -0.39
SNX21-211ENST00000486336 ZNF274Q96GC6 653 aaPredicted RBP12.61□□□□□ -0.39
SNX21-211ENST00000486336 GPR20Q99678 358 aa12.61□□□□□ -0.39
SNX21-211ENST00000486336 SENP7Q9BQF6 1050 aa12.61□□□□□ -0.39
SNX21-211ENST00000486336 MXRA8Q9BRK3 442 aa12.61□□□□□ -0.39
SNX21-211ENST00000486336 C16orf70Q9BSU1 422 aa12.61□□□□□ -0.39
SNX21-211ENST00000486336 FTOQ9C0B1 505 aaKnown RBP eCLIP12.61□□□□□ -0.39
SNX21-211ENST00000486336 TUT1Q9H6E5 874 aaKnown RBP12.61□□□□□ -0.39
SNX21-211ENST00000486336 GTF2IRD1Q9UHL9 959 aa12.61□□□□□ -0.39
SNX21-211ENST00000486336 TELO2Q9Y4R8 837 aa12.61□□□□□ -0.39
SNX21-211ENST00000486336 C17orf102A2RUQ5 167 aa12.6□□□□□ -0.39
SNX21-211ENST00000486336 ZBBXA8MT70 800 aa12.6□□□□□ -0.39
SNX21-211ENST00000486336 HAS3O00219 553 aa12.6□□□□□ -0.39
SNX21-211ENST00000486336 EIF5BO60841 1220 aaKnown RBP12.6□□□□□ -0.39
SNX21-211ENST00000486336 HOXD8P13378 290 aaPredicted RBP12.6□□□□□ -0.39
SNX21-211ENST00000486336 GNA11P29992 359 aa12.6□□□□□ -0.39
SNX21-211ENST00000486336 EVCP57679 992 aa12.6□□□□□ -0.39
SNX21-211ENST00000486336 SMAD3P84022 425 aaKnown RBP12.6□□□□□ -0.39
SNX21-211ENST00000486336 AP3B2Q13367 1082 aa12.6□□□□□ -0.39
SNX21-211ENST00000486336 ZNF697Q5TEC3 545 aa12.6□□□□□ -0.39
SNX21-211ENST00000486336 CPLX2Q6PUV4 134 aaKnown RBP12.6□□□□□ -0.39
SNX21-211ENST00000486336 SESTD1Q86VW0 696 aa12.6□□□□□ -0.39
SNX21-211ENST00000486336 CYP2W1Q8TAV3 490 aa12.6□□□□□ -0.39
SNX21-211ENST00000486336 RNF26Q9BY78 433 aaPredicted RBP12.6□□□□□ -0.39
SNX21-211ENST00000486336 MTIF3Q9H2K0 278 aaKnown RBP12.6□□□□□ -0.39
SNX21-211ENST00000486336 VPS54Q9P1Q0 977 aa12.6□□□□□ -0.39
SNX21-211ENST00000486336 DOCK5Q9H7D0 1870 aa12.59□□□□□ -0.39
SNX21-211ENST00000486336 NID2Q14112 1375 aa12.59□□□□□ -0.39
SNX21-211ENST00000486336 GRXCR1A8MXD5 290 aa12.59□□□□□ -0.39
SNX21-211ENST00000486336 ADAMTS3O15072 1205 aa12.59□□□□□ -0.39
SNX21-211ENST00000486336 MAFGO15525 162 aa12.59□□□□□ -0.39
SNX21-211ENST00000486336 IQCF3P0C7M6 154 aa12.59□□□□□ -0.39
SNX21-211ENST00000486336 SMIM10L2AP0DMW4 78 aa12.59□□□□□ -0.39
SNX21-211ENST00000486336 SMIM10L2BP0DMW5 78 aa12.59□□□□□ -0.39
SNX21-211ENST00000486336 ARP10275 920 aa12.59□□□□□ -0.39
SNX21-211ENST00000486336 KCNA2P16389 499 aa12.59□□□□□ -0.39
SNX21-211ENST00000486336 CLK2P49760 499 aaKnown RBP12.59□□□□□ -0.39
SNX21-211ENST00000486336 NLRP5P59047 1200 aa12.59□□□□□ -0.39
SNX21-211ENST00000486336 ARHGAP4P98171 946 aa12.59□□□□□ -0.39
SNX21-211ENST00000486336 TRIM50Q86XT4 487 aa12.59□□□□□ -0.39
SNX21-211ENST00000486336 REXO1Q8N1G1 1221 aaKnown RBP12.59□□□□□ -0.39
SNX21-211ENST00000486336 CCDC148Q8NFR7 591 aa12.59□□□□□ -0.39
SNX21-211ENST00000486336 CAGE1Q8TC20 777 aa12.59□□□□□ -0.39
SNX21-211ENST00000486336 BICD2Q8TD16 824 aa12.59□□□□□ -0.39
SNX21-211ENST00000486336 RASGRP4Q8TDF6 673 aa12.59□□□□□ -0.39
SNX21-211ENST00000486336 SEPT1Q8WYJ6 367 aa12.59□□□□□ -0.39
SNX21-211ENST00000486336 HERVK_113Q902F9 699 aa12.59□□□□□ -0.39
SNX21-211ENST00000486336 ATP6V0A1Q93050 837 aa12.59□□□□□ -0.39
SNX21-211ENST00000486336 UIMC1Q96RL1 719 aa12.59□□□□□ -0.39
SNX21-211ENST00000486336 SDF4Q9BRK5 362 aa12.59□□□□□ -0.39
SNX21-211ENST00000486336 ZMYND12Q9H0C1 365 aa12.59□□□□□ -0.39
SNX21-211ENST00000486336 SLKQ9H2G2 1235 aaPredicted RBP12.59□□□□□ -0.39
SNX21-211ENST00000486336 KCNH7Q9NS40 1196 aa12.59□□□□□ -0.39
SNX21-211ENST00000486336 ZNF215Q9UL58 517 aaPredicted RBP12.59□□□□□ -0.39
SNX21-211ENST00000486336 ESYT2A0FGR8 921 aa12.58□□□□□ -0.4
SNX21-211ENST00000486336 DDX39AO00148 427 aaKnown RBP12.58□□□□□ -0.4
SNX21-211ENST00000486336 PITPNM1O00562 1244 aa12.58□□□□□ -0.4
SNX21-211ENST00000486336 SEC24BO95487 1268 aa12.58□□□□□ -0.4
SNX21-211ENST00000486336 ACTN1P12814 892 aa12.58□□□□□ -0.4
SNX21-211ENST00000486336 TCF7P36402 384 aaPredicted RBP12.58□□□□□ -0.4
SNX21-211ENST00000486336 SREBF1P36956 1147 aa12.58□□□□□ -0.4
SNX21-211ENST00000486336 ANAPC15P60006 121 aa12.58□□□□□ -0.4
SNX21-211ENST00000486336 PTK7Q13308 1070 aa12.58□□□□□ -0.4
SNX21-211ENST00000486336 CEP55Q53EZ4 464 aa12.58□□□□□ -0.4
SNX21-211ENST00000486336 FAM109BQ6ICB4 259 aaPredicted RBP12.58□□□□□ -0.4
SNX21-211ENST00000486336 PLA2G4DQ86XP0 818 aa12.58□□□□□ -0.4
SNX21-211ENST00000486336 TEX2Q8IWB9 1127 aa12.58□□□□□ -0.4
SNX21-211ENST00000486336 DHX38Q92620 1227 aaKnown RBP12.58□□□□□ -0.4
SNX21-211ENST00000486336 GLG1Q92896 1179 aa12.58□□□□□ -0.4
SNX21-211ENST00000486336 SETD4Q9NVD3 440 aa12.58□□□□□ -0.4
SNX21-211ENST00000486336 MTMR10Q9NXD2 777 aa12.58□□□□□ -0.4
SNX21-211ENST00000486336 CXXC1Q9P0U4 656 aaPredicted RBP12.58□□□□□ -0.4
SNX21-211ENST00000486336 GSTTP1A0A1W2PQM5 241 aa12.57□□□□□ -0.4
SNX21-211ENST00000486336 DTNBO60941 627 aa12.57□□□□□ -0.4
SNX21-211ENST00000486336 DEXIO95424 95 aa12.57□□□□□ -0.4
SNX21-211ENST00000486336 GNAT1P11488 350 aa12.57□□□□□ -0.4
SNX21-211ENST00000486336 CKBP12277 381 aa12.57□□□□□ -0.4
SNX21-211ENST00000486336 SELPP16109 830 aa12.57□□□□□ -0.4
SNX21-211ENST00000486336 MARK3P27448 753 aa12.57□□□□□ -0.4
SNX21-211ENST00000486336 RFC2P35250 354 aa12.57□□□□□ -0.4
SNX21-211ENST00000486336 THPOP40225 353 aa12.57□□□□□ -0.4
SNX21-211ENST00000486336 AK2P54819 239 aa12.57□□□□□ -0.4
SNX21-211ENST00000486336 HIC1Q14526 733 aa12.57□□□□□ -0.4
SNX21-211ENST00000486336 ANKRD1Q15327 319 aa12.57□□□□□ -0.4
SNX21-211ENST00000486336 MCTP2Q6DN12 878 aa12.57□□□□□ -0.4
SNX21-211ENST00000486336 LRRC8DQ7L1W4 858 aa12.57□□□□□ -0.4
SNX21-211ENST00000486336 AFAP1L1Q8TED9 768 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms