RNA–Protein interactions for RNA: ENST00000486268.5

ERGIC3-215, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-215ENST00000486268 TRERF1Q96PN7 1200 aa13.2□□□□□ -0.3
ERGIC3-215ENST00000486268 POLR3CQ9BUI4 534 aaPredicted RBP13.2□□□□□ -0.3
ERGIC3-215ENST00000486268 WDR11Q9BZH6 1224 aa13.2□□□□□ -0.3
ERGIC3-215ENST00000486268 RAVER2Q9HCJ3 691 aaKnown RBP13.2□□□□□ -0.3
ERGIC3-215ENST00000486268 BLOC1S4Q9NUP1 217 aa13.2□□□□□ -0.3
ERGIC3-215ENST00000486268 EXOC1Q9NV70 894 aa13.2□□□□□ -0.3
ERGIC3-215ENST00000486268 SYNRGQ9UMZ2 1314 aa13.19□□□□□ -0.3
ERGIC3-215ENST00000486268 CA12O43570 354 aa13.19□□□□□ -0.3
ERGIC3-215ENST00000486268 ZNF18P17022 549 aa13.19□□□□□ -0.3
ERGIC3-215ENST00000486268 RPA1P27694 616 aa13.19□□□□□ -0.3
ERGIC3-215ENST00000486268 FANCCQ00597 558 aa13.19□□□□□ -0.3
ERGIC3-215ENST00000486268 SPAG1Q07617 926 aa13.19□□□□□ -0.3
ERGIC3-215ENST00000486268 SPIRE1Q08AE8 756 aa13.19□□□□□ -0.3
ERGIC3-215ENST00000486268 PAK1Q13153 545 aa13.19□□□□□ -0.3
ERGIC3-215ENST00000486268 PPP2R5CQ13362 524 aa13.19□□□□□ -0.3
ERGIC3-215ENST00000486268 TAF1CQ15572 869 aaPredicted RBP13.19□□□□□ -0.3
ERGIC3-215ENST00000486268 KMT5BQ4FZB7 885 aa13.19□□□□□ -0.3
ERGIC3-215ENST00000486268 SAMD1Q6SPF0 538 aaPredicted RBP13.19□□□□□ -0.3
ERGIC3-215ENST00000486268 UNC13DQ70J99 1090 aa13.19□□□□□ -0.3
ERGIC3-215ENST00000486268 CPXCR1Q8N123 301 aa13.19□□□□□ -0.3
ERGIC3-215ENST00000486268 TBC1D5Q92609 795 aa13.19□□□□□ -0.3
ERGIC3-215ENST00000486268 STAMQ92783 540 aa13.19□□□□□ -0.3
ERGIC3-215ENST00000486268 ATG4CQ96DT6 458 aa13.19□□□□□ -0.3
ERGIC3-215ENST00000486268 CTAGE1Q96RT6 745 aa13.19□□□□□ -0.3
ERGIC3-215ENST00000486268 RIT2Q99578 217 aa13.19□□□□□ -0.3
ERGIC3-215ENST00000486268 MXRA8Q9BRK3 442 aa13.19□□□□□ -0.3
ERGIC3-215ENST00000486268 CFHR5Q9BXR6 569 aa13.19□□□□□ -0.3
ERGIC3-215ENST00000486268 ASCC2Q9H1I8 757 aaPredicted RBP13.19□□□□□ -0.3
ERGIC3-215ENST00000486268 HSD3B7Q9H2F3 369 aa13.19□□□□□ -0.3
ERGIC3-215ENST00000486268 FANCLQ9NW38 375 aa13.19□□□□□ -0.3
ERGIC3-215ENST00000486268 SAGE1Q9NXZ1 904 aa13.19□□□□□ -0.3
ERGIC3-215ENST00000486268 TSKSQ9UJT2 592 aa13.19□□□□□ -0.3
ERGIC3-215ENST00000486268 NFE2L3Q9Y4A8 694 aa13.19□□□□□ -0.3
ERGIC3-215ENST00000486268 NFIBO00712 420 aa13.18□□□□□ -0.3
ERGIC3-215ENST00000486268 PSMA7O14818 248 aa13.18□□□□□ -0.3
ERGIC3-215ENST00000486268 PSMD10O75832 226 aa13.18□□□□□ -0.3
ERGIC3-215ENST00000486268 TBC1D8O95759 1140 aa13.18□□□□□ -0.3
ERGIC3-215ENST00000486268 ALDH1A1P00352 501 aa13.18□□□□□ -0.3
ERGIC3-215ENST00000486268 SERPINC1P01008 464 aa13.18□□□□□ -0.3
ERGIC3-215ENST00000486268 CDK11BP21127 795 aaKnown RBP13.18□□□□□ -0.3
ERGIC3-215ENST00000486268 CASP1P29466 404 aa13.18□□□□□ -0.3
ERGIC3-215ENST00000486268 GSDMDP57764 484 aa13.18□□□□□ -0.3
ERGIC3-215ENST00000486268 ASIC1P78348 528 aa13.18□□□□□ -0.3
ERGIC3-215ENST00000486268 FOXR2Q6PJQ5 311 aa13.18□□□□□ -0.3
ERGIC3-215ENST00000486268 RNF207Q6ZRF8 634 aa13.18□□□□□ -0.3
ERGIC3-215ENST00000486268 ADSSL1Q8N142 457 aa13.18□□□□□ -0.3
ERGIC3-215ENST00000486268 NEK9Q8TD19 979 aa13.18□□□□□ -0.3
ERGIC3-215ENST00000486268 SYTL5Q8TDW5 730 aaPredicted RBP13.18□□□□□ -0.3
ERGIC3-215ENST00000486268 LRRC15Q8TF66 581 aa13.18□□□□□ -0.3
ERGIC3-215ENST00000486268 NOC3LQ8WTT2 800 aaKnown RBP13.18□□□□□ -0.3
ERGIC3-215ENST00000486268 PLIN2Q99541 437 aa13.18□□□□□ -0.3
ERGIC3-215ENST00000486268 TEX13BQ9BXU2 312 aa13.18□□□□□ -0.3
ERGIC3-215ENST00000486268 TUFT1Q9NNX1 390 aa13.18□□□□□ -0.3
ERGIC3-215ENST00000486268 VAV3Q9UKW4 847 aa13.18□□□□□ -0.3
ERGIC3-215ENST00000486268 MGAMO43451 1857 aa13.18□□□□□ -0.3
ERGIC3-215ENST00000486268 SMCHD1A6NHR9 2005 aa13.18□□□□□ -0.3
ERGIC3-215ENST00000486268 CASP8AP2Q9UKL3 1982 aa13.18□□□□□ -0.3
ERGIC3-215ENST00000486268 RBBP6Q7Z6E9 1792 aaKnown RBP13.17□□□□□ -0.3
ERGIC3-215ENST00000486268 BICDL2A1A5D9 508 aa13.17□□□□□ -0.3
ERGIC3-215ENST00000486268 SPDYE16A6NNV3 312 aaPredicted RBP13.17□□□□□ -0.3
ERGIC3-215ENST00000486268 MAFGO15525 162 aa13.17□□□□□ -0.3
ERGIC3-215ENST00000486268 PEX10O60683 326 aa13.17□□□□□ -0.3
ERGIC3-215ENST00000486268 CD44P16070 742 aaKnown RBP13.17□□□□□ -0.3
ERGIC3-215ENST00000486268 TAL1P17542 331 aaPredicted RBP13.17□□□□□ -0.3
ERGIC3-215ENST00000486268 UBASH3AP57075 661 aa13.17□□□□□ -0.3
ERGIC3-215ENST00000486268 HERVK_113P62684 666 aa13.17□□□□□ -0.3
ERGIC3-215ENST00000486268 PDE4DQ08499 809 aa13.17□□□□□ -0.3
ERGIC3-215ENST00000486268 PABPC4Q13310 644 aaKnown RBP eCLIP13.17□□□□□ -0.31e-6■□□□□ 10.8
ERGIC3-215ENST00000486268 MCM6Q14566 821 aa13.17□□□□□ -0.3
ERGIC3-215ENST00000486268 TPD52L1Q16890 204 aaPredicted RBP13.17□□□□□ -0.3
ERGIC3-215ENST00000486268 LRCH2Q5VUJ6 765 aa13.17□□□□□ -0.3
ERGIC3-215ENST00000486268 LBX2Q6XYB7 198 aa13.17□□□□□ -0.3
ERGIC3-215ENST00000486268 OTOP1Q7RTM1 612 aa13.17□□□□□ -0.3
ERGIC3-215ENST00000486268 CHST13Q8NET6 341 aa13.17□□□□□ -0.3
ERGIC3-215ENST00000486268 ANKRD20A12PQ8NF67 263 aa13.17□□□□□ -0.3
ERGIC3-215ENST00000486268 PARK7Q99497 189 aaKnown RBP13.17□□□□□ -0.3
ERGIC3-215ENST00000486268 PRDM10Q9NQV6 1147 aa13.17□□□□□ -0.3
ERGIC3-215ENST00000486268 RNF146Q9NTX7 359 aa13.17□□□□□ -0.3
ERGIC3-215ENST00000486268 IFNKQ9P0W0 207 aa13.17□□□□□ -0.3
ERGIC3-215ENST00000486268 KIAA1024Q9UPX6 916 aa13.17□□□□□ -0.3
ERGIC3-215ENST00000486268 DNM3Q9UQ16 869 aa13.17□□□□□ -0.3
ERGIC3-215ENST00000486268 UBIAD1Q9Y5Z9 338 aa13.17□□□□□ -0.3
ERGIC3-215ENST00000486268 DOCK3Q8IZD9 2030 aa13.17□□□□□ -0.3
ERGIC3-215ENST00000486268 MYMKA6NI61 221 aa13.16□□□□□ -0.3
ERGIC3-215ENST00000486268 ZNF500O60304 480 aaPredicted RBP13.16□□□□□ -0.3
ERGIC3-215ENST00000486268 TLR2O60603 784 aa13.16□□□□□ -0.3
ERGIC3-215ENST00000486268 GAS7O60861 476 aa13.16□□□□□ -0.3
ERGIC3-215ENST00000486268 STAM2O75886 525 aa13.16□□□□□ -0.3
ERGIC3-215ENST00000486268 KIF20AO95235 890 aa13.16□□□□□ -0.3
ERGIC3-215ENST00000486268 OSBPP22059 807 aa13.16□□□□□ -0.3
ERGIC3-215ENST00000486268 COPB2P35606 906 aa13.16□□□□□ -0.3
ERGIC3-215ENST00000486268 PRCPP42785 496 aa13.16□□□□□ -0.3
ERGIC3-215ENST00000486268 RPS6P62753 249 aaKnown RBP13.16□□□□□ -0.3
ERGIC3-215ENST00000486268 IRX3P78415 501 aaPredicted RBP13.16□□□□□ -0.3
ERGIC3-215ENST00000486268 EPHA7Q15375 998 aa13.16□□□□□ -0.3
ERGIC3-215ENST00000486268 MUM1L1Q5H9M0 696 aa13.16□□□□□ -0.3
ERGIC3-215ENST00000486268 CDKAL1Q5VV42 579 aa13.16□□□□□ -0.3
ERGIC3-215ENST00000486268 NCAPH2Q6IBW4 605 aa13.16□□□□□ -0.3
ERGIC3-215ENST00000486268 SNRNP48Q6IEG0 339 aaKnown RBP13.16□□□□□ -0.3
ERGIC3-215ENST00000486268 C17orf99Q6UX52 265 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms