RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 WDR63Q8IWG1 891 aa8.02□□□□□ -1.13
TMEM39A-209ENST00000486235 C7orf61Q8IZ16 206 aa8.02□□□□□ -1.13
TMEM39A-209ENST00000486235 WDR66Q8TBY9 1149 aa8.02□□□□□ -1.13
TMEM39A-209ENST00000486235 SMCR8Q8TEV9 937 aaPredicted RBP8.02□□□□□ -1.13
TMEM39A-209ENST00000486235 DIS3LQ8TF46 1054 aaKnown RBP8.02□□□□□ -1.13
TMEM39A-209ENST00000486235 PAWRQ96IZ0 340 aaKnown RBP8.02□□□□□ -1.13
TMEM39A-209ENST00000486235 FBXL18Q96ME1 805 aa8.02□□□□□ -1.13
TMEM39A-209ENST00000486235 PICK1Q9NRD5 415 aa8.02□□□□□ -1.13
TMEM39A-209ENST00000486235 USP40Q9NVE5 1235 aa8.02□□□□□ -1.13
TMEM39A-209ENST00000486235 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.02□□□□□ -1.13
TMEM39A-209ENST00000486235 ZMYND8Q9ULU4 1186 aaPredicted RBP8.02□□□□□ -1.13
TMEM39A-209ENST00000486235 CACNA1FO60840 1977 aa8.02□□□□□ -1.13
TMEM39A-209ENST00000486235 A0A0G2JLL6 359 aaPredicted RBP8.01□□□□□ -1.13
TMEM39A-209ENST00000486235 TRIM75PA6NK02 468 aa8.01□□□□□ -1.13
TMEM39A-209ENST00000486235 PRNPP04156 253 aa8.01□□□□□ -1.13
TMEM39A-209ENST00000486235 ALKBH2Q6NS38 261 aa8.01□□□□□ -1.13
TMEM39A-209ENST00000486235 Q7L0L9 218 aa8.01□□□□□ -1.13
TMEM39A-209ENST00000486235 FASTKD5Q7L8L6 764 aaKnown RBP8.01□□□□□ -1.13
TMEM39A-209ENST00000486235 PRRT2Q7Z6L0 340 aaPredicted RBP8.01□□□□□ -1.13
TMEM39A-209ENST00000486235 SCYL3Q8IZE3 742 aa8.01□□□□□ -1.13
TMEM39A-209ENST00000486235 ANKRD13CQ8N6S4 541 aa8.01□□□□□ -1.13
TMEM39A-209ENST00000486235 FLCNQ8NFG4 579 aa8.01□□□□□ -1.13
TMEM39A-209ENST00000486235 ACTL7BQ9Y614 415 aa8.01□□□□□ -1.13
TMEM39A-209ENST00000486235 AK9Q5TCS8 1911 aa8.01□□□□□ -1.13
TMEM39A-209ENST00000486235 UTYO14607 1347 aa8.01□□□□□ -1.13
TMEM39A-209ENST00000486235 ATRNL1Q5VV63 1379 aa8□□□□□ -1.13
TMEM39A-209ENST00000486235 EYA2O00167 538 aa8□□□□□ -1.13
TMEM39A-209ENST00000486235 LDHBP07195 334 aaKnown RBP8□□□□□ -1.13
TMEM39A-209ENST00000486235 CTSBP07858 339 aa8□□□□□ -1.13
TMEM39A-209ENST00000486235 ADH5P11766 374 aa8□□□□□ -1.13
TMEM39A-209ENST00000486235 SYN1P17600 705 aa8□□□□□ -1.13
TMEM39A-209ENST00000486235 MAOBP27338 520 aa8□□□□□ -1.13
TMEM39A-209ENST00000486235 RGS3P49796 1198 aa8□□□□□ -1.13
TMEM39A-209ENST00000486235 CPSF6Q16630 551 aaKnown RBP eCLIP8□□□□□ -1.13
TMEM39A-209ENST00000486235 CBLL1Q75N03 491 aa8□□□□□ -1.13
TMEM39A-209ENST00000486235 DYMQ7RTS9 669 aa8□□□□□ -1.13
TMEM39A-209ENST00000486235 NECAB2Q7Z6G3 386 aa8□□□□□ -1.13
TMEM39A-209ENST00000486235 ZSCAN29Q8IWY8 852 aaPredicted RBP8□□□□□ -1.13
TMEM39A-209ENST00000486235 DEFB123Q8N688 67 aa8□□□□□ -1.13
TMEM39A-209ENST00000486235 LPIN2Q92539 896 aa8□□□□□ -1.13
TMEM39A-209ENST00000486235 COA7Q96BR5 231 aa8□□□□□ -1.13
TMEM39A-209ENST00000486235 YIPF2Q9BWQ6 316 aa8□□□□□ -1.13
TMEM39A-209ENST00000486235 XRN2Q9H0D6 950 aaKnown RBP eCLIP8□□□□□ -1.13
TMEM39A-209ENST00000486235 MRS2Q9HD23 443 aa8□□□□□ -1.13
TMEM39A-209ENST00000486235 PAK6Q9NQU5 681 aaPredicted RBP8□□□□□ -1.13
TMEM39A-209ENST00000486235 AFG3L2Q9Y4W6 797 aa8□□□□□ -1.13
TMEM39A-209ENST00000486235 LRRFIP2Q9Y608 721 aaKnown RBP8□□□□□ -1.13
TMEM39A-209ENST00000486235 KIF16BQ96L93 1317 aa8□□□□□ -1.13
TMEM39A-209ENST00000486235 MGAMO43451 1857 aa7.99□□□□□ -1.13
TMEM39A-209ENST00000486235 PICALMQ13492 652 aa7.99□□□□□ -1.13
TMEM39A-209ENST00000486235 ZNF423Q2M1K9 1284 aa7.99□□□□□ -1.13
TMEM39A-209ENST00000486235 SPRED3Q2MJR0 410 aa7.99□□□□□ -1.13
TMEM39A-209ENST00000486235 TREML2Q5T2D2 321 aa7.99□□□□□ -1.13
TMEM39A-209ENST00000486235 EZH1Q92800 747 aaPredicted RBP7.99□□□□□ -1.13
TMEM39A-209ENST00000486235 GATA6Q92908 595 aa7.99□□□□□ -1.13
TMEM39A-209ENST00000486235 GDF15Q99988 308 aa7.99□□□□□ -1.13
TMEM39A-209ENST00000486235 SIL1Q9H173 461 aa7.99□□□□□ -1.13
TMEM39A-209ENST00000486235 ARID1BQ8NFD5 2236 aaPredicted RBP7.99□□□□□ -1.13
TMEM39A-209ENST00000486235 DDTLA6NHG4 134 aaPredicted RBP7.98□□□□□ -1.13
TMEM39A-209ENST00000486235 ENTPD3O75355 529 aa7.98□□□□□ -1.13
TMEM39A-209ENST00000486235 PHKA1P46020 1223 aa7.98□□□□□ -1.13
TMEM39A-209ENST00000486235 RFX5P48382 616 aaPredicted RBP7.98□□□□□ -1.13
TMEM39A-209ENST00000486235 PCDH1Q08174 1060 aa7.98□□□□□ -1.13
TMEM39A-209ENST00000486235 ATP2B3Q16720 1220 aa7.98□□□□□ -1.13
TMEM39A-209ENST00000486235 ZNF765Q7L2R6 523 aa7.98□□□□□ -1.13
TMEM39A-209ENST00000486235 ASIC4Q96FT7 647 aa7.98□□□□□ -1.13
TMEM39A-209ENST00000486235 NRSN2Q9GZP1 204 aa7.98□□□□□ -1.13
TMEM39A-209ENST00000486235 ANO2Q9NQ90 1003 aa7.98□□□□□ -1.13
TMEM39A-209ENST00000486235 DDX4Q9NQI0 724 aaKnown RBP7.98□□□□□ -1.13
TMEM39A-209ENST00000486235 RAD18Q9NS91 495 aa7.98□□□□□ -1.13
TMEM39A-209ENST00000486235 GNL3LQ9NVN8 582 aaKnown RBP7.98□□□□□ -1.13
TMEM39A-209ENST00000486235 ZC3H7BQ9UGR2 993 aaKnown RBP7.98□□□□□ -1.13
TMEM39A-209ENST00000486235 AGTPBP1Q9UPW5 1226 aa7.98□□□□□ -1.13
TMEM39A-209ENST00000486235 SLC45A1Q9Y2W3 748 aa7.98□□□□□ -1.13
TMEM39A-209ENST00000486235 ALPK3Q96L96 1907 aa7.97□□□□□ -1.13
TMEM39A-209ENST00000486235 DOCK3Q8IZD9 2030 aa7.97□□□□□ -1.13
TMEM39A-209ENST00000486235 A0A096LPE4 126 aa7.97□□□□□ -1.13
TMEM39A-209ENST00000486235 A0A1W2PPZ6 126 aa7.97□□□□□ -1.13
TMEM39A-209ENST00000486235 E9PSI1 815 aa7.97□□□□□ -1.13
TMEM39A-209ENST00000486235 FZD6O60353 706 aa7.97□□□□□ -1.13
TMEM39A-209ENST00000486235 CTNND1O60716 968 aaKnown RBP7.97□□□□□ -1.13
TMEM39A-209ENST00000486235 ECEL1O95672 775 aa7.97□□□□□ -1.13
TMEM39A-209ENST00000486235 HMGCRP04035 888 aa7.97□□□□□ -1.13
TMEM39A-209ENST00000486235 ADORA1P30542 326 aa7.97□□□□□ -1.13
TMEM39A-209ENST00000486235 BMP8BP34820 402 aa7.97□□□□□ -1.13
TMEM39A-209ENST00000486235 MAGEA10P43363 369 aaPredicted RBP7.97□□□□□ -1.13
TMEM39A-209ENST00000486235 POU4F3Q15319 338 aa7.97□□□□□ -1.13
TMEM39A-209ENST00000486235 FAM110CQ1W6H9 321 aa7.97□□□□□ -1.13
TMEM39A-209ENST00000486235 ATG9AQ7Z3C6 839 aa7.97□□□□□ -1.13
TMEM39A-209ENST00000486235 DZIP1Q86YF9 867 aaKnown RBP7.97□□□□□ -1.13
TMEM39A-209ENST00000486235 IDI2Q9BXS1 227 aa7.97□□□□□ -1.13
TMEM39A-209ENST00000486235 USP44Q9H0E7 712 aa7.97□□□□□ -1.13
TMEM39A-209ENST00000486235 C11orf49Q9H6J7 331 aa7.97□□□□□ -1.13
TMEM39A-209ENST00000486235 FAM105AQ9NUU6 356 aa7.97□□□□□ -1.13
TMEM39A-209ENST00000486235 ABCF2Q9UG63 623 aa7.97□□□□□ -1.13
TMEM39A-209ENST00000486235 DENND2AQ9ULE3 1009 aa7.97□□□□□ -1.13
TMEM39A-209ENST00000486235 GAKO14976 1311 aa7.97□□□□□ -1.13
TMEM39A-209ENST00000486235 SALL1Q9NSC2 1324 aa7.97□□□□□ -1.13
TMEM39A-209ENST00000486235 RFX7Q2KHR2 1363 aa7.97□□□□□ -1.13
TMEM39A-209ENST00000486235 LAMA3Q16787 3333 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms