RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 RPUSD2Q8IZ73 545 aaKnown RBP8.06□□□□□ -1.12
VPS50-218ENST00000485994 AFG1LQ8WV93 481 aa8.06□□□□□ -1.12
VPS50-218ENST00000485994 KAT2BQ92831 832 aa8.06□□□□□ -1.12
VPS50-218ENST00000485994 MYL10Q9BUA6 226 aa8.06□□□□□ -1.12
VPS50-218ENST00000485994 LRRC2Q9BYS8 371 aa8.06□□□□□ -1.12
VPS50-218ENST00000485994 MRVI1Q9Y6F6 885 aa8.06□□□□□ -1.12
VPS50-218ENST00000485994 NID2Q14112 1375 aa8.06□□□□□ -1.12
VPS50-218ENST00000485994 TMEM265A0A087WTH1 108 aa8.05□□□□□ -1.12
VPS50-218ENST00000485994 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.05□□□□□ -1.12
VPS50-218ENST00000485994 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.05□□□□□ -1.12
VPS50-218ENST00000485994 PRPF3O43395 683 aaKnown RBP8.05□□□□□ -1.12
VPS50-218ENST00000485994 FIBPO43427 364 aa8.05□□□□□ -1.12
VPS50-218ENST00000485994 PARNO95453 639 aaKnown RBP8.05□□□□□ -1.12
VPS50-218ENST00000485994 MYL3P08590 195 aa8.05□□□□□ -1.12
VPS50-218ENST00000485994 MYCLP12524 364 aaPredicted RBP8.05□□□□□ -1.12
VPS50-218ENST00000485994 RPS6KB1P23443 525 aa8.05□□□□□ -1.12
VPS50-218ENST00000485994 EPHB4P54760 987 aa8.05□□□□□ -1.12
VPS50-218ENST00000485994 SP2Q02086 613 aa8.05□□□□□ -1.12
VPS50-218ENST00000485994 RTN1Q16799 776 aa8.05□□□□□ -1.12
VPS50-218ENST00000485994 GNPTABQ3T906 1256 aa8.05□□□□□ -1.12
VPS50-218ENST00000485994 C9orf50Q5SZB4 431 aa8.05□□□□□ -1.12
VPS50-218ENST00000485994 THSD4Q6ZMP0 1018 aa8.05□□□□□ -1.12
VPS50-218ENST00000485994 RUFY3Q7L099 469 aa8.05□□□□□ -1.12
VPS50-218ENST00000485994 NLRX1Q86UT6 975 aa8.05□□□□□ -1.12
VPS50-218ENST00000485994 FCHSD1Q86WN1 690 aa8.05□□□□□ -1.12
VPS50-218ENST00000485994 GIMAP8Q8ND71 665 aaPredicted RBP8.05□□□□□ -1.12
VPS50-218ENST00000485994 SMARCC2Q8TAQ2 1214 aa8.05□□□□□ -1.12
VPS50-218ENST00000485994 GPRASP2Q96D09 838 aa8.05□□□□□ -1.12
VPS50-218ENST00000485994 IL17RAQ96F46 866 aa8.05□□□□□ -1.12
VPS50-218ENST00000485994 LRCH3Q96II8 777 aa8.05□□□□□ -1.12
VPS50-218ENST00000485994 CDHR1Q96JP9 859 aa8.05□□□□□ -1.12
VPS50-218ENST00000485994 NOC4LQ9BVI4 516 aaKnown RBP8.05□□□□□ -1.12
VPS50-218ENST00000485994 KATNAL1Q9BW62 490 aa8.05□□□□□ -1.12
VPS50-218ENST00000485994 TRPV6Q9H1D0 765 aa8.05□□□□□ -1.12
VPS50-218ENST00000485994 HIPK3Q9H422 1215 aa8.05□□□□□ -1.12
VPS50-218ENST00000485994 IL23AQ9NPF7 189 aa8.05□□□□□ -1.12
VPS50-218ENST00000485994 RIC8AQ9NPQ8 531 aa8.05□□□□□ -1.12
VPS50-218ENST00000485994 BARHL2Q9NY43 387 aa8.05□□□□□ -1.12
VPS50-218ENST00000485994 V9GY48 417 aaPredicted RBP8.05□□□□□ -1.12
VPS50-218ENST00000485994 TET1Q8NFU7 2136 aa8.05□□□□□ -1.12
VPS50-218ENST00000485994 KLF18A0A0U1RQI7 1052 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 ESYT2A0FGR8 921 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 GGPS1O95749 300 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 F2P00734 622 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 FGBP02675 491 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 PFKMP08237 780 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 CSF2RAP15509 400 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 IFNAR1P17181 557 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 RXRAP19793 462 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 CDC27P30260 824 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 HOXC8P31273 242 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 RFC2P35250 354 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 ADD1P35611 737 aaKnown RBP8.04□□□□□ -1.12
VPS50-218ENST00000485994 CLK2P49760 499 aaKnown RBP8.04□□□□□ -1.12
VPS50-218ENST00000485994 PSMC6P62333 389 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 SEMA3FQ13275 785 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 NTRK3Q16288 839 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 HSDL1Q3SXM5 330 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 PSRC1Q6PGN9 363 aaPredicted RBP8.04□□□□□ -1.12
VPS50-218ENST00000485994 METTL7BQ6UX53 244 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 Q6ZUG5 572 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 MICU3Q86XE3 530 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 FAM177A1Q8N128 213 aaPredicted RBP8.04□□□□□ -1.12
VPS50-218ENST00000485994 CMTR1Q8N1G2 835 aaKnown RBP8.04□□□□□ -1.12
VPS50-218ENST00000485994 CCDC82Q8N4S0 544 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 IL31RAQ8NI17 732 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 CAGE1Q8TC20 777 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 HERVK_113Q902F9 699 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 VWCEQ96DN2 955 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 ZNF274Q96GC6 653 aaPredicted RBP8.04□□□□□ -1.12
VPS50-218ENST00000485994 SPATA33Q96N06 139 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 JAKMIP1Q96N16 626 aaKnown RBP8.04□□□□□ -1.12
VPS50-218ENST00000485994 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.04□□□□□ -1.12
VPS50-218ENST00000485994 C16orf70Q9BSU1 422 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 ZMYND12Q9H0C1 365 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 MLXIPQ9HAP2 919 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 MTMR10Q9NXD2 777 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 PCDHA6Q9UN73 950 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 PCDHA8Q9Y5H6 950 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 UBIAD1Q9Y5Z9 338 aa8.04□□□□□ -1.12
VPS50-218ENST00000485994 CNTNAP5Q8WYK1 1306 aa8.03□□□□□ -1.12
VPS50-218ENST00000485994 SMCO2A6NFE2 343 aa8.03□□□□□ -1.12
VPS50-218ENST00000485994 SPDYE3A6NKU9 549 aa8.03□□□□□ -1.12
VPS50-218ENST00000485994 GOLGA8AA7E2F4 631 aa8.03□□□□□ -1.12
VPS50-218ENST00000485994 GOLGA8BA8MQT2 603 aa8.03□□□□□ -1.12
VPS50-218ENST00000485994 STXBP3O00186 592 aa8.03□□□□□ -1.12
VPS50-218ENST00000485994 UBA1P22314 1058 aaKnown RBP8.03□□□□□ -1.12
VPS50-218ENST00000485994 PDIA3P30101 505 aaKnown RBP8.03□□□□□ -1.12
VPS50-218ENST00000485994 CYP2C18P33260 490 aa8.03□□□□□ -1.12
VPS50-218ENST00000485994 METAP2P50579 478 aaKnown RBP eCLIP8.03□□□□□ -1.12
VPS50-218ENST00000485994 ANAPC15P60006 121 aa8.03□□□□□ -1.12
VPS50-218ENST00000485994 FOXK1P85037 733 aa8.03□□□□□ -1.12
VPS50-218ENST00000485994 FGD1P98174 961 aa8.03□□□□□ -1.12
VPS50-218ENST00000485994 APOBRQ0VD83 1088 aa8.03□□□□□ -1.12
VPS50-218ENST00000485994 AP3B2Q13367 1082 aa8.03□□□□□ -1.12
VPS50-218ENST00000485994 BFSP2Q13515 415 aa8.03□□□□□ -1.12
VPS50-218ENST00000485994 PKN1Q16512 942 aa8.03□□□□□ -1.12
VPS50-218ENST00000485994 PFKFB3Q16875 520 aaPredicted RBP8.03□□□□□ -1.12
VPS50-218ENST00000485994 WWC2Q6AWC2 1192 aa8.03□□□□□ -1.12
VPS50-218ENST00000485994 ZNF365Q70YC5 407 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms