RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 RIT2Q99578 217 aa12.76□□□□□ -0.37
SND1-212ENST00000485871 KATNBL1Q9H079 304 aa12.76□□□□□ -0.37
SND1-212ENST00000485871 DACT1Q9NYF0 836 aa12.76□□□□□ -0.37
SND1-212ENST00000485871 GJD2Q9UKL4 321 aa12.76□□□□□ -0.37
SND1-212ENST00000485871 PCDHA12Q9UN75 941 aa12.76□□□□□ -0.37
SND1-212ENST00000485871 IVNS1ABPQ9Y6Y0 642 aa12.76□□□□□ -0.37
SND1-212ENST00000485871 LOXHD1Q8IVV2 1947 aa12.76□□□□□ -0.37
SND1-212ENST00000485871 SPATA31C2B4DYI2 1134 aa12.75□□□□□ -0.37
SND1-212ENST00000485871 IPO5O00410 1097 aaKnown RBP12.75□□□□□ -0.37
SND1-212ENST00000485871 MAFGO15525 162 aa12.75□□□□□ -0.37
SND1-212ENST00000485871 ATP9AO75110 1047 aa12.75□□□□□ -0.37
SND1-212ENST00000485871 EIF3JO75822 258 aaKnown RBP12.75□□□□□ -0.37
SND1-212ENST00000485871 KCNA2P16389 499 aa12.75□□□□□ -0.37
SND1-212ENST00000485871 MAP2K5Q13163 448 aa12.75□□□□□ -0.37
SND1-212ENST00000485871 PPP2R5CQ13362 524 aa12.75□□□□□ -0.37
SND1-212ENST00000485871 E2F4Q16254 413 aa12.75□□□□□ -0.37
SND1-212ENST00000485871 CCDC73Q6ZRK6 1079 aa12.75□□□□□ -0.37
SND1-212ENST00000485871 OTOP1Q7RTM1 612 aa12.75□□□□□ -0.37
SND1-212ENST00000485871 NLRX1Q86UT6 975 aa12.75□□□□□ -0.37
SND1-212ENST00000485871 LRRC15Q8TF66 581 aa12.75□□□□□ -0.37
SND1-212ENST00000485871 MAML3Q96JK9 1138 aa12.75□□□□□ -0.37
SND1-212ENST00000485871 NUDT12Q9BQG2 462 aa12.75□□□□□ -0.37
SND1-212ENST00000485871 ZNF577Q9BSK1 485 aa12.75□□□□□ -0.37
SND1-212ENST00000485871 KCNH3Q9ULD8 1083 aa12.75□□□□□ -0.37
SND1-212ENST00000485871 EML1O00423 815 aa12.74□□□□□ -0.37
SND1-212ENST00000485871 FKTNO75072 461 aa12.74□□□□□ -0.37
SND1-212ENST00000485871 ZNF202O95125 648 aa12.74□□□□□ -0.37
SND1-212ENST00000485871 SYKP43405 635 aa12.74□□□□□ -0.37
SND1-212ENST00000485871 FXR1P51114 621 aaKnown RBP eCLIP12.74□□□□□ -0.37
SND1-212ENST00000485871 LACTBP83111 547 aaPredicted RBP12.74□□□□□ -0.37
SND1-212ENST00000485871 CCDC173Q0VFZ6 552 aa12.74□□□□□ -0.37
SND1-212ENST00000485871 TMEM266Q2M3C6 531 aa12.74□□□□□ -0.37
SND1-212ENST00000485871 HYIQ5T013 277 aa12.74□□□□□ -0.37
SND1-212ENST00000485871 LRCH2Q5VUJ6 765 aa12.74□□□□□ -0.37
SND1-212ENST00000485871 ARMCX2Q7L311 632 aa12.74□□□□□ -0.37
SND1-212ENST00000485871 GAS2L3Q86XJ1 694 aa12.74□□□□□ -0.37
SND1-212ENST00000485871 TIGD1Q96MW7 591 aa12.74□□□□□ -0.37
SND1-212ENST00000485871 PNMA5Q96PV4 448 aa12.74□□□□□ -0.37
SND1-212ENST00000485871 ARHGAP39Q9C0H5 1083 aa12.74□□□□□ -0.37
SND1-212ENST00000485871 DDX19AQ9NUU7 478 aaKnown RBP12.74□□□□□ -0.37
SND1-212ENST00000485871 FAM13BQ9NYF5 915 aa12.74□□□□□ -0.37
SND1-212ENST00000485871 MYH9P35579 1960 aaKnown RBP12.74□□□□□ -0.37
SND1-212ENST00000485871 ARID2Q68CP9 1835 aa12.74□□□□□ -0.37
SND1-212ENST00000485871 NFASCO94856 1347 aa12.73□□□□□ -0.37
SND1-212ENST00000485871 ASB14A6NK59 587 aa12.73□□□□□ -0.37
SND1-212ENST00000485871 B4DLN1 442 aa12.73□□□□□ -0.37
SND1-212ENST00000485871 SLC26A4O43511 780 aa12.73□□□□□ -0.37
SND1-212ENST00000485871 ACTN4O43707 911 aaKnown RBP12.73□□□□□ -0.37
SND1-212ENST00000485871 SNAI1O95863 264 aaPredicted RBP12.73□□□□□ -0.37
SND1-212ENST00000485871 SP2Q02086 613 aa12.73□□□□□ -0.37
SND1-212ENST00000485871 PDE4DQ08499 809 aa12.73□□□□□ -0.37
SND1-212ENST00000485871 GRB10Q13322 594 aa12.73□□□□□ -0.37
SND1-212ENST00000485871 KARSQ15046 597 aaKnown RBP12.73□□□□□ -0.37
SND1-212ENST00000485871 NAALADL2Q58DX5 795 aa12.73□□□□□ -0.37
SND1-212ENST00000485871 RBM43Q6ZSC3 357 aaKnown RBP12.73□□□□□ -0.37
SND1-212ENST00000485871 CABP7Q86V35 215 aa12.73□□□□□ -0.37
SND1-212ENST00000485871 SOCS4Q8WXH5 440 aa12.73□□□□□ -0.37
SND1-212ENST00000485871 CDHR1Q96JP9 859 aa12.73□□□□□ -0.37
SND1-212ENST00000485871 TRIM47Q96LD4 638 aa12.73□□□□□ -0.37
SND1-212ENST00000485871 TEKT3Q9BXF9 490 aa12.73□□□□□ -0.37
SND1-212ENST00000485871 RAB34Q9BZG1 259 aa12.73□□□□□ -0.37
SND1-212ENST00000485871 UNC45AQ9H3U1 944 aa12.73□□□□□ -0.37
SND1-212ENST00000485871 TSPY26PQ9H489 355 aa12.73□□□□□ -0.37
SND1-212ENST00000485871 CLSTN2Q9H4D0 955 aa12.73□□□□□ -0.37
SND1-212ENST00000485871 BCAS3Q9H6U6 928 aa12.73□□□□□ -0.37
SND1-212ENST00000485871 LRWD1Q9UFC0 647 aa12.73□□□□□ -0.37
SND1-212ENST00000485871 SYNGAP1Q96PV0 1343 aa12.72□□□□□ -0.37
SND1-212ENST00000485871 RBM47A0AV96 593 aaKnown RBP12.72□□□□□ -0.37
SND1-212ENST00000485871 TNPO2O14787 897 aaKnown RBP12.72□□□□□ -0.37
SND1-212ENST00000485871 POLR2DO15514 142 aaKnown RBP12.72□□□□□ -0.37
SND1-212ENST00000485871 GAS7O60861 476 aa12.72□□□□□ -0.37
SND1-212ENST00000485871 ARIH2O95376 493 aa12.72□□□□□ -0.37
SND1-212ENST00000485871 SPATA31C1P0DKV0 1188 aa12.72□□□□□ -0.37
SND1-212ENST00000485871 FCGRTP55899 365 aa12.72□□□□□ -0.37
SND1-212ENST00000485871 SP3Q02447 781 aa12.72□□□□□ -0.37
SND1-212ENST00000485871 ECM1Q16610 540 aa12.72□□□□□ -0.37
SND1-212ENST00000485871 GNPTABQ3T906 1256 aa12.72□□□□□ -0.37
SND1-212ENST00000485871 LONRF3Q496Y0 759 aa12.72□□□□□ -0.37
SND1-212ENST00000485871 TMEM119Q4V9L6 283 aa12.72□□□□□ -0.37
SND1-212ENST00000485871 TAPT1Q6NXT6 567 aa12.72□□□□□ -0.37
SND1-212ENST00000485871 PDXDC2PQ6P474 469 aa12.72□□□□□ -0.37
SND1-212ENST00000485871 CCDC62Q6P9F0 684 aa12.72□□□□□ -0.37
SND1-212ENST00000485871 KRBA2Q6ZNG9 492 aa12.72□□□□□ -0.37
SND1-212ENST00000485871 SH3RF1Q7Z6J0 888 aa12.72□□□□□ -0.37
SND1-212ENST00000485871 DPP9Q86TI2 863 aa12.72□□□□□ -0.37
SND1-212ENST00000485871 FBXO16Q8IX29 292 aaPredicted RBP12.72□□□□□ -0.37
SND1-212ENST00000485871 ELOA2Q8IYF1 753 aaPredicted RBP12.72□□□□□ -0.37
SND1-212ENST00000485871 MSL3Q8N5Y2 521 aaKnown RBP12.72□□□□□ -0.37
SND1-212ENST00000485871 MPHOSPH6Q99547 160 aaKnown RBP12.72□□□□□ -0.37
SND1-212ENST00000485871 SENP7Q9BQF6 1050 aa12.72□□□□□ -0.37
SND1-212ENST00000485871 DISC1Q9NRI5 854 aa12.72□□□□□ -0.37
SND1-212ENST00000485871 TBC1D22BQ9NU19 505 aa12.72□□□□□ -0.37
SND1-212ENST00000485871 FLRT1Q9NZU1 646 aa12.72□□□□□ -0.37
SND1-212ENST00000485871 SERTAD1Q9UHV2 236 aa12.72□□□□□ -0.37
SND1-212ENST00000485871 SYCE3A1L190 88 aa12.71□□□□□ -0.37
SND1-212ENST00000485871 MARCH6O60337 910 aa12.71□□□□□ -0.37
SND1-212ENST00000485871 MED24O75448 989 aa12.71□□□□□ -0.37
SND1-212ENST00000485871 ECM2O94769 699 aaPredicted RBP12.71□□□□□ -0.37
SND1-212ENST00000485871 CCNE2O96020 404 aa12.71□□□□□ -0.37
SND1-212ENST00000485871 TGFB3P10600 412 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms