RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 LRFN3Q9BTN0 628 aa8.22□□□□□ -1.09
SMC4-217ENST00000485867 DDX4Q9NQI0 724 aaKnown RBP8.22□□□□□ -1.09
SMC4-217ENST00000485867 FLRT1Q9NZU1 646 aa8.22□□□□□ -1.09
SMC4-217ENST00000485867 UTYO14607 1347 aa8.22□□□□□ -1.09
SMC4-217ENST00000485867 GAKO14976 1311 aa8.22□□□□□ -1.09
SMC4-217ENST00000485867 BRWD1Q9NSI6 2320 aa8.21□□□□□ -1.09
SMC4-217ENST00000485867 PRRC2BQ5JSZ5 2229 aaKnown RBP8.21□□□□□ -1.09
SMC4-217ENST00000485867 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.21□□□□□ -1.1
SMC4-217ENST00000485867 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.21□□□□□ -1.1
SMC4-217ENST00000485867 PDE2AO00408 941 aaPredicted RBP8.21□□□□□ -1.1
SMC4-217ENST00000485867 IFIT1P09914 478 aaKnown RBP8.21□□□□□ -1.1
SMC4-217ENST00000485867 ITGB8P26012 769 aa8.21□□□□□ -1.1
SMC4-217ENST00000485867 HOXA7P31268 230 aaPredicted RBP8.21□□□□□ -1.1
SMC4-217ENST00000485867 HERVK_113P62684 666 aa8.21□□□□□ -1.1
SMC4-217ENST00000485867 ERVK-24P63145 666 aa8.21□□□□□ -1.1
SMC4-217ENST00000485867 PUM3Q15397 648 aaKnown RBP8.21□□□□□ -1.1
SMC4-217ENST00000485867 C8orf34Q49A92 452 aa8.21□□□□□ -1.1
SMC4-217ENST00000485867 GJC2Q5T442 439 aaPredicted RBP8.21□□□□□ -1.1
SMC4-217ENST00000485867 MFSD14CQ5VZR4 134 aa8.21□□□□□ -1.1
SMC4-217ENST00000485867 PLEKHH3Q7Z736 793 aa8.21□□□□□ -1.1
SMC4-217ENST00000485867 TRPV1Q8NER1 839 aa8.21□□□□□ -1.1
SMC4-217ENST00000485867 UTP4Q969X6 686 aaKnown RBP8.21□□□□□ -1.1
SMC4-217ENST00000485867 OSBPL5Q9H0X9 879 aaPredicted RBP8.21□□□□□ -1.1
SMC4-217ENST00000485867 OSGEPQ9NPF4 335 aa8.21□□□□□ -1.1
SMC4-217ENST00000485867 RBPJLQ9UBG7 517 aa8.21□□□□□ -1.1
SMC4-217ENST00000485867 ZNF236Q9UL36 1845 aa8.2□□□□□ -1.1
SMC4-217ENST00000485867 KBTBD13C9JR72 458 aa8.2□□□□□ -1.1
SMC4-217ENST00000485867 NPR3P17342 541 aa8.2□□□□□ -1.1
SMC4-217ENST00000485867 CNGA1P29973 690 aa8.2□□□□□ -1.1
SMC4-217ENST00000485867 PICALMQ13492 652 aa8.2□□□□□ -1.1
SMC4-217ENST00000485867 MTMR3Q13615 1198 aa8.2□□□□□ -1.1
SMC4-217ENST00000485867 RRP1BQ14684 758 aaKnown RBP8.2□□□□□ -1.1
SMC4-217ENST00000485867 CCDC82Q8N4S0 544 aa8.2□□□□□ -1.1
SMC4-217ENST00000485867 PMEPA1Q969W9 287 aa8.2□□□□□ -1.1
SMC4-217ENST00000485867 MYRFLQ96LU7 910 aa8.2□□□□□ -1.1
SMC4-217ENST00000485867 PRDM12Q9H4Q4 367 aa8.2□□□□□ -1.1
SMC4-217ENST00000485867 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.2□□□□□ -1.1
SMC4-217ENST00000485867 PCMTD2Q9NV79 361 aa8.2□□□□□ -1.1
SMC4-217ENST00000485867 C9orf78Q9NZ63 289 aaPredicted RBP8.2□□□□□ -1.1
SMC4-217ENST00000485867 SOX13Q9UN79 622 aa8.2□□□□□ -1.1
SMC4-217ENST00000485867 SALL1Q9NSC2 1324 aa8.2□□□□□ -1.1
SMC4-217ENST00000485867 LRRC37A2A6NM11 1700 aa8.2□□□□□ -1.1
SMC4-217ENST00000485867 CDK5RAP2Q96SN8 1893 aa8.19□□□□□ -1.1
SMC4-217ENST00000485867 IGHA2P01877 340 aa8.19□□□□□ -1.1
SMC4-217ENST00000485867 HOXC6P09630 235 aa8.19□□□□□ -1.1
SMC4-217ENST00000485867 CYBAP13498 195 aa8.19□□□□□ -1.1
SMC4-217ENST00000485867 SLC5A1P13866 664 aa8.19□□□□□ -1.1
SMC4-217ENST00000485867 SSTR4P31391 388 aa8.19□□□□□ -1.1
SMC4-217ENST00000485867 CAP2P40123 477 aa8.19□□□□□ -1.1
SMC4-217ENST00000485867 TLE2Q04725 743 aa8.19□□□□□ -1.1
SMC4-217ENST00000485867 CCDC85BQ15834 202 aaPredicted RBP8.19□□□□□ -1.1
SMC4-217ENST00000485867 RABL6Q3YEC7 729 aaPredicted RBP8.19□□□□□ -1.1
SMC4-217ENST00000485867 ALKBH2Q6NS38 261 aa8.19□□□□□ -1.1
SMC4-217ENST00000485867 CCAR1Q8IX12 1150 aaKnown RBP8.19□□□□□ -1.1
SMC4-217ENST00000485867 TMEM102Q8N9M5 508 aaPredicted RBP8.19□□□□□ -1.1
SMC4-217ENST00000485867 ARRDC4Q8NCT1 418 aa8.19□□□□□ -1.1
SMC4-217ENST00000485867 KLHDC4Q8TBB5 520 aa8.19□□□□□ -1.1
SMC4-217ENST00000485867 EDC3Q96F86 508 aaKnown RBP8.19□□□□□ -1.1
SMC4-217ENST00000485867 PAGR1Q9BTK6 254 aa8.19□□□□□ -1.1
SMC4-217ENST00000485867 EPHX3Q9H6B9 360 aa8.19□□□□□ -1.1
SMC4-217ENST00000485867 C7orf69Q9H7B7 122 aa8.19□□□□□ -1.1
SMC4-217ENST00000485867 AS3MTQ9HBK9 375 aa8.19□□□□□ -1.1
SMC4-217ENST00000485867 POLIQ9UNA4 740 aa8.19□□□□□ -1.1
SMC4-217ENST00000485867 CHD9Q3L8U1 2897 aa8.18□□□□□ -1.1
SMC4-217ENST00000485867 CACNA1AO00555 2505 aa8.18□□□□□ -1.1
SMC4-217ENST00000485867 SLC15A5A6NIM6 579 aa8.18□□□□□ -1.1
SMC4-217ENST00000485867 KIAA0355O15063 1070 aa8.18□□□□□ -1.1
SMC4-217ENST00000485867 ALDH1L1O75891 902 aa8.18□□□□□ -1.1
SMC4-217ENST00000485867 CYP2C19P33261 490 aa8.18□□□□□ -1.1
SMC4-217ENST00000485867 BACE1P56817 501 aa8.18□□□□□ -1.1
SMC4-217ENST00000485867 FPGSQ05932 587 aa8.18□□□□□ -1.1
SMC4-217ENST00000485867 TMEM31Q5JXX7 168 aa8.18□□□□□ -1.1
SMC4-217ENST00000485867 ZDHHC13Q8IUH4 622 aa8.18□□□□□ -1.1
SMC4-217ENST00000485867 ANKRD44Q8N8A2 993 aa8.18□□□□□ -1.1
SMC4-217ENST00000485867 TTC16Q8NEE8 873 aa8.18□□□□□ -1.1
SMC4-217ENST00000485867 NPLOC4Q8TAT6 608 aa8.18□□□□□ -1.1
SMC4-217ENST00000485867 LPIN2Q92539 896 aa8.18□□□□□ -1.1
SMC4-217ENST00000485867 WDR18Q9BV38 432 aa8.18□□□□□ -1.1
SMC4-217ENST00000485867 BICC1Q9H694 974 aaKnown RBP8.18□□□□□ -1.1
SMC4-217ENST00000485867 CWC22Q9HCG8 908 aaKnown RBP8.18□□□□□ -1.1
SMC4-217ENST00000485867 TMOD4Q9NZQ9 345 aa8.18□□□□□ -1.1
SMC4-217ENST00000485867 TACC3Q9Y6A5 838 aa8.18□□□□□ -1.1
SMC4-217ENST00000485867 ZNFX1Q9P2E3 1918 aaKnown RBP8.18□□□□□ -1.1
SMC4-217ENST00000485867 FOCADQ5VW36 1801 aa8.17□□□□□ -1.1
SMC4-217ENST00000485867 CHD7Q9P2D1 2997 aa8.17□□□□□ -1.1
SMC4-217ENST00000485867 HMX2A2RU54 273 aa8.17□□□□□ -1.1
SMC4-217ENST00000485867 EREGO14944 169 aa8.17□□□□□ -1.1
SMC4-217ENST00000485867 TNFRSF21O75509 655 aa8.17□□□□□ -1.1
SMC4-217ENST00000485867 CNMDO75829 334 aa8.17□□□□□ -1.1
SMC4-217ENST00000485867 GLRX3O76003 335 aaKnown RBP8.17□□□□□ -1.1
SMC4-217ENST00000485867 MED26O95402 600 aa8.17□□□□□ -1.1
SMC4-217ENST00000485867 TGFB1P01137 390 aa8.17□□□□□ -1.1
SMC4-217ENST00000485867 CLTBP09497 229 aa8.17□□□□□ -1.1
SMC4-217ENST00000485867 NBPF7P0C2Y1 421 aaPredicted RBP8.17□□□□□ -1.1
SMC4-217ENST00000485867 RAG1P15918 1043 aa8.17□□□□□ -1.1
SMC4-217ENST00000485867 ADCYAP1R1P41586 468 aa8.17□□□□□ -1.1
SMC4-217ENST00000485867 BTDP43251 543 aa8.17□□□□□ -1.1
SMC4-217ENST00000485867 RHBDL3P58872 404 aa8.17□□□□□ -1.1
SMC4-217ENST00000485867 NLRP12P59046 1061 aa8.17□□□□□ -1.1
SMC4-217ENST00000485867 ATP2B2Q01814 1243 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms