RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 TNFRSF25Q93038 417 aa5.25□□□□□ -1.57
SMARCC1-206ENST00000485737 PNMA5Q96PV4 448 aa5.25□□□□□ -1.57
SMARCC1-206ENST00000485737 STRBPQ96SI9 672 aaKnown RBP5.25□□□□□ -1.57
SMARCC1-206ENST00000485737 CDC5LQ99459 802 aaKnown RBP5.25□□□□□ -1.57
SMARCC1-206ENST00000485737 SH3GL2Q99962 352 aa5.25□□□□□ -1.57
SMARCC1-206ENST00000485737 NCAPGQ9BPX3 1015 aa5.25□□□□□ -1.57
SMARCC1-206ENST00000485737 RHOXF2Q9BQY4 288 aa5.25□□□□□ -1.57
SMARCC1-206ENST00000485737 PAGR1Q9BTK6 254 aa5.25□□□□□ -1.57
SMARCC1-206ENST00000485737 RNF26Q9BY78 433 aaPredicted RBP5.25□□□□□ -1.57
SMARCC1-206ENST00000485737 CSRNP2Q9H175 543 aa5.25□□□□□ -1.57
SMARCC1-206ENST00000485737 ZSWIM4Q9H7M6 989 aa5.25□□□□□ -1.57
SMARCC1-206ENST00000485737 EPB41L4AQ9HCS5 686 aaPredicted RBP5.25□□□□□ -1.57
SMARCC1-206ENST00000485737 PIH1D3Q9NQM4 214 aaKnown RBP5.25□□□□□ -1.57
SMARCC1-206ENST00000485737 RMND1Q9NWS8 449 aa5.25□□□□□ -1.57
SMARCC1-206ENST00000485737 SERPINA10Q9UK55 444 aa5.25□□□□□ -1.57
SMARCC1-206ENST00000485737 DENND2AQ9ULE3 1009 aa5.25□□□□□ -1.57
SMARCC1-206ENST00000485737 ZMIZ1Q9ULJ6 1067 aa5.25□□□□□ -1.57
SMARCC1-206ENST00000485737 CCDC9Q9Y3X0 531 aaKnown RBP5.25□□□□□ -1.57
SMARCC1-206ENST00000485737 JRKLQ9Y4A0 524 aa5.25□□□□□ -1.57
SMARCC1-206ENST00000485737 RIPOR2Q9Y4F9 1068 aa5.25□□□□□ -1.57
SMARCC1-206ENST00000485737 PCDHB6Q9Y5E3 794 aa5.25□□□□□ -1.57
SMARCC1-206ENST00000485737 SHANK3Q9BYB0 1731 aa5.25□□□□□ -1.57
SMARCC1-206ENST00000485737 DUOX1Q9NRD9 1551 aa5.25□□□□□ -1.57
SMARCC1-206ENST00000485737 XDHP47989 1333 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 PDS5AQ29RF7 1337 aaKnown RBP5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 ZNF532Q9HCE3 1301 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 ANKRD36CQ5JPF3 1778 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 DLEC1Q9Y238 1755 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 ELOA3CA0A087WX78 387 aaPredicted RBP5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 ELOA3DA6NLF2 546 aaPredicted RBP5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 SRRM3A6NNA2 597 aaPredicted RBP5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 A6NNZ2 444 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 LGALS16A8MUM7 142 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 ERVV-2B6SEH9 535 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 PATL2C9JE40 543 aaKnown RBP5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 GOLGA8KD6RF30 607 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 TGFBR3LH3BV60 316 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 GNB5O14775 395 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 IFIT3O14879 490 aaKnown RBP5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 N4BP3O15049 544 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 ZEB2O60315 1214 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 SIN3BO75182 1162 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 GNAT2P19087 354 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 RXRAP19793 462 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 EEF1GP26641 437 aaKnown RBP5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 GUCY1A2P33402 732 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 TRAPPC10P48553 1259 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 DGKGP49619 791 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 GTF2A1P52655 376 aaPredicted RBP5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 CABP4P57796 275 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 HERVK_113P62684 666 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 ATP2C1P98194 919 aaPredicted RBP5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 CDK17Q00537 523 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 PPFIA1Q13136 1202 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 PAK1Q13153 545 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 TCIRG1Q13488 830 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 STIM1Q13586 685 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 SART3Q15020 963 aaKnown RBP5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 ELOA3BQ3SY89 546 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 TUBB8Q3ZCM7 444 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 HSP90AB3PQ58FF7 597 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 HSP90AA4PQ58FG1 418 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 TCP11X2Q5H9J9 407 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 SPECC1Q5M775 1068 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 AKNAD1Q5T1N1 836 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 MCTP2Q6DN12 878 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 NCAPH2Q6IBW4 605 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 TMED8Q6PL24 325 aaPredicted RBP5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 USP49Q70CQ1 688 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 TMTC2Q8N394 836 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 MMGT1Q8N4V1 131 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 ELOA3Q8NG57 546 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 FAM76AQ8TAV0 307 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 NOC3LQ8WTT2 800 aaKnown RBP5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 IQCDQ96DY2 449 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 CEP89Q96ST8 783 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 MYCBPQ99417 103 aaPredicted RBP5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 MKNK1Q9BUB5 465 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 PHF20Q9BVI0 1012 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 TTYH3Q9C0H2 523 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 SUV39H2Q9H5I1 410 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 QTRT2Q9H974 415 aaKnown RBP5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 NLRP2Q9NX02 1062 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 FAM184BQ9ULE4 1060 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 CTNND2Q9UQB3 1225 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 BCS1LQ9Y276 419 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 SAR1BQ9Y6B6 198 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 EPN1Q9Y6I3 576 aaPredicted RBP5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 CHD4Q14839 1912 aa5.24□□□□□ -1.57
SMARCC1-206ENST00000485737 GRIN2DO15399 1336 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 PCDH11XQ9BZA7 1347 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 PCDH11YQ9BZA8 1340 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 TOGARAM1Q9Y4F4 1720 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 KCNJ18B7U540 433 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 UBE2Q2LH0YL09 131 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 AGPSO00116 658 aa5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 EIF3HO15372 352 aaKnown RBP eCLIP5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 PRPF3O43395 683 aaKnown RBP5.23□□□□□ -1.57
SMARCC1-206ENST00000485737 TFRCP02786 760 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms