RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 CELF3Q5SZQ8 465 aaKnown RBP9.37□□□□□ -0.91
SF3A1-208ENST00000485618 BRAPQ7Z569 592 aa9.37□□□□□ -0.91
SF3A1-208ENST00000485618 SLFN12Q8IYM2 578 aa9.37□□□□□ -0.91
SF3A1-208ENST00000485618 IL31RAQ8NI17 732 aa9.37□□□□□ -0.91
SF3A1-208ENST00000485618 PPTC7Q8NI37 304 aa9.37□□□□□ -0.91
SF3A1-208ENST00000485618 GLT1D1Q96MS3 346 aa9.37□□□□□ -0.91
SF3A1-208ENST00000485618 SPATA33Q96N06 139 aa9.37□□□□□ -0.91
SF3A1-208ENST00000485618 ZNF577Q9BSK1 485 aa9.37□□□□□ -0.91
SF3A1-208ENST00000485618 KATNAL1Q9BW62 490 aa9.37□□□□□ -0.91
SF3A1-208ENST00000485618 UPF3AQ9H1J1 476 aaKnown RBP9.37□□□□□ -0.91
SF3A1-208ENST00000485618 KCNH7Q9NS40 1196 aa9.37□□□□□ -0.91
SF3A1-208ENST00000485618 DDX25Q9UHL0 483 aaKnown RBP9.37□□□□□ -0.91
SF3A1-208ENST00000485618 GNEQ9Y223 722 aaKnown RBP9.37□□□□□ -0.91
SF3A1-208ENST00000485618 NFASCO94856 1347 aa9.36□□□□□ -0.91
SF3A1-208ENST00000485618 ELP1O95163 1332 aa9.36□□□□□ -0.91
SF3A1-208ENST00000485618 SYNRGQ9UMZ2 1314 aa9.36□□□□□ -0.91
SF3A1-208ENST00000485618 VPS37CA5D8V6 355 aaPredicted RBP9.36□□□□□ -0.91
SF3A1-208ENST00000485618 A6NJR5 290 aa9.36□□□□□ -0.91
SF3A1-208ENST00000485618 IPO5O00410 1097 aaKnown RBP9.36□□□□□ -0.91
SF3A1-208ENST00000485618 TBX3O15119 743 aa9.36□□□□□ -0.91
SF3A1-208ENST00000485618 GGPS1O95749 300 aa9.36□□□□□ -0.91
SF3A1-208ENST00000485618 BMP15O95972 392 aa9.36□□□□□ -0.91
SF3A1-208ENST00000485618 U2AF2P26368 475 aaKnown RBP eCLIP9.36□□□□□ -0.91
SF3A1-208ENST00000485618 CST5P28325 142 aaPredicted RBP9.36□□□□□ -0.91
SF3A1-208ENST00000485618 KRT76Q01546 638 aa9.36□□□□□ -0.91
SF3A1-208ENST00000485618 LRRC41Q15345 812 aa9.36□□□□□ -0.91
SF3A1-208ENST00000485618 KCNA10Q16322 511 aa9.36□□□□□ -0.91
SF3A1-208ENST00000485618 INF2Q27J81 1249 aa9.36□□□□□ -0.91
SF3A1-208ENST00000485618 RILPL1Q5EBL4 403 aa9.36□□□□□ -0.91
SF3A1-208ENST00000485618 ANO1Q5XXA6 986 aa9.36□□□□□ -0.91
SF3A1-208ENST00000485618 RASGRP4Q8TDF6 673 aa9.36□□□□□ -0.91
SF3A1-208ENST00000485618 SEPT1Q8WYJ6 367 aa9.36□□□□□ -0.91
SF3A1-208ENST00000485618 PGBD1Q96JS3 809 aa9.36□□□□□ -0.91
SF3A1-208ENST00000485618 RIT2Q99578 217 aa9.36□□□□□ -0.91
SF3A1-208ENST00000485618 ZSCAN16Q9H4T2 348 aaPredicted RBP9.36□□□□□ -0.91
SF3A1-208ENST00000485618 AZI2Q9H6S1 392 aa9.36□□□□□ -0.91
SF3A1-208ENST00000485618 JPH1Q9HDC5 661 aaPredicted RBP9.36□□□□□ -0.91
SF3A1-208ENST00000485618 MTMR10Q9NXD2 777 aa9.36□□□□□ -0.91
SF3A1-208ENST00000485618 ZNF215Q9UL58 517 aaPredicted RBP9.36□□□□□ -0.91
SF3A1-208ENST00000485618 CEP131Q9UPN4 1083 aa9.36□□□□□ -0.91
SF3A1-208ENST00000485618 UNC80Q8N2C7 3258 aa9.35□□□□□ -0.91
SF3A1-208ENST00000485618 STX6O43752 255 aa9.35□□□□□ -0.91
SF3A1-208ENST00000485618 DKC1O60832 514 aaKnown RBP eCLIP9.35□□□□□ -0.91
SF3A1-208ENST00000485618 GAS7O60861 476 aa9.35□□□□□ -0.91
SF3A1-208ENST00000485618 RGS20O76081 388 aa9.35□□□□□ -0.91
SF3A1-208ENST00000485618 SYT1P21579 422 aa9.35□□□□□ -0.91
SF3A1-208ENST00000485618 UBA1P22314 1058 aaKnown RBP9.35□□□□□ -0.91
SF3A1-208ENST00000485618 SFNP31947 248 aa9.35□□□□□ -0.91
SF3A1-208ENST00000485618 ACLYP53396 1101 aa9.35□□□□□ -0.91
SF3A1-208ENST00000485618 NR5A1Q13285 461 aa9.35□□□□□ -0.91
SF3A1-208ENST00000485618 NPY5RQ15761 445 aa9.35□□□□□ -0.91
SF3A1-208ENST00000485618 GJC2Q5T442 439 aaPredicted RBP9.35□□□□□ -0.91
SF3A1-208ENST00000485618 MYSM1Q5VVJ2 828 aa9.35□□□□□ -0.91
SF3A1-208ENST00000485618 CYFIP1Q7L576 1253 aa9.35□□□□□ -0.91
SF3A1-208ENST00000485618 SMAP1Q8IYB5 467 aaPredicted RBP9.35□□□□□ -0.91
SF3A1-208ENST00000485618 KLHDC9Q8NEP7 349 aa9.35□□□□□ -0.91
SF3A1-208ENST00000485618 CRYGNQ8WXF5 182 aa9.35□□□□□ -0.91
SF3A1-208ENST00000485618 LBHD1Q9BQE6 289 aaPredicted RBP9.35□□□□□ -0.91
SF3A1-208ENST00000485618 MTG1Q9BT17 334 aaPredicted RBP9.35□□□□□ -0.91
SF3A1-208ENST00000485618 RAB34Q9BZG1 259 aa9.35□□□□□ -0.91
SF3A1-208ENST00000485618 SENP6Q9GZR1 1112 aaPredicted RBP9.35□□□□□ -0.91
SF3A1-208ENST00000485618 AGO4Q9HCK5 861 aaKnown RBP9.35□□□□□ -0.91
SF3A1-208ENST00000485618 GJB4Q9NTQ9 266 aa9.35□□□□□ -0.91
SF3A1-208ENST00000485618 SLC9A2Q9UBY0 812 aa9.35□□□□□ -0.91
SF3A1-208ENST00000485618 PRKAG2Q9UGJ0 569 aa9.35□□□□□ -0.91
SF3A1-208ENST00000485618 PHF24Q9UPV7 400 aa9.35□□□□□ -0.91
SF3A1-208ENST00000485618 SAMM50Q9Y512 469 aa9.35□□□□□ -0.91
SF3A1-208ENST00000485618 ATP6V1DQ9Y5K8 247 aa9.35□□□□□ -0.91
SF3A1-208ENST00000485618 STK24Q9Y6E0 443 aa9.35□□□□□ -0.91
SF3A1-208ENST00000485618 MCM3APO60318 1980 aa9.35□□□□□ -0.91
SF3A1-208ENST00000485618 MROH7Q68CQ1 1323 aa9.34□□□□□ -0.91
SF3A1-208ENST00000485618 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.34□□□□□ -0.91
SF3A1-208ENST00000485618 WDR64B1ANS9 1081 aa9.34□□□□□ -0.91
SF3A1-208ENST00000485618 FAM86B1E9PN63 330 aa9.34□□□□□ -0.91
SF3A1-208ENST00000485618 LAD1O00515 517 aa9.34□□□□□ -0.91
SF3A1-208ENST00000485618 NEMFO60524 1076 aa9.34□□□□□ -0.91
SF3A1-208ENST00000485618 ADAMTS4O75173 837 aa9.34□□□□□ -0.91
SF3A1-208ENST00000485618 ASGR1P07306 291 aa9.34□□□□□ -0.91
SF3A1-208ENST00000485618 PSAPP07602 524 aa9.34□□□□□ -0.91
SF3A1-208ENST00000485618 MYL3P08590 195 aa9.34□□□□□ -0.91
SF3A1-208ENST00000485618 FAM86B2P0C5J1 330 aa9.34□□□□□ -0.91
SF3A1-208ENST00000485618 GNAT1P11488 350 aa9.34□□□□□ -0.91
SF3A1-208ENST00000485618 KCNA2P16389 499 aa9.34□□□□□ -0.91
SF3A1-208ENST00000485618 ATP2B1P20020 1258 aa9.34□□□□□ -0.91
SF3A1-208ENST00000485618 SLC26A2P50443 739 aa9.34□□□□□ -0.91
SF3A1-208ENST00000485618 JAK3P52333 1124 aa9.34□□□□□ -0.91
SF3A1-208ENST00000485618 ATN1P54259 1190 aaPredicted RBP9.34□□□□□ -0.91
SF3A1-208ENST00000485618 ARHGAP1Q07960 439 aa9.34□□□□□ -0.91
SF3A1-208ENST00000485618 CALCRLQ16602 461 aa9.34□□□□□ -0.91
SF3A1-208ENST00000485618 TMEM266Q2M3C6 531 aa9.34□□□□□ -0.91
SF3A1-208ENST00000485618 LRCH2Q5VUJ6 765 aa9.34□□□□□ -0.91
SF3A1-208ENST00000485618 FAM160B1Q5W0V3 765 aa9.34□□□□□ -0.91
SF3A1-208ENST00000485618 ZNF746Q6NUN9 644 aaPredicted RBP9.34□□□□□ -0.91
SF3A1-208ENST00000485618 MIS18BP1Q6P0N0 1132 aa9.34□□□□□ -0.91
SF3A1-208ENST00000485618 RDM1Q8NG50 284 aa9.34□□□□□ -0.91
SF3A1-208ENST00000485618 CYP2W1Q8TAV3 490 aa9.34□□□□□ -0.91
SF3A1-208ENST00000485618 OXER1Q8TDS5 423 aa9.34□□□□□ -0.91
SF3A1-208ENST00000485618 AFG1LQ8WV93 481 aa9.34□□□□□ -0.91
SF3A1-208ENST00000485618 GLG1Q92896 1179 aa9.34□□□□□ -0.91
SF3A1-208ENST00000485618 TNFRSF25Q93038 417 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms