RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 LRRC41Q15345 812 aa22.57■■□□□ 1.2
COL6A2-208ENST00000485591 CYFIP1Q7L576 1253 aa22.57■■□□□ 1.2
COL6A2-208ENST00000485591 ETNPPLQ8TBG4 499 aa22.57■■□□□ 1.2
COL6A2-208ENST00000485591 SDF4Q9BRK5 362 aa22.57■■□□□ 1.2
COL6A2-208ENST00000485591 MLXIPQ9HAP2 919 aa22.57■■□□□ 1.2
COL6A2-208ENST00000485591 KCNMB3Q9NPA1 279 aa22.57■■□□□ 1.2
COL6A2-208ENST00000485591 A6NJR5 290 aa22.56■■□□□ 1.2
COL6A2-208ENST00000485591 DNM1LO00429 736 aa22.56■■□□□ 1.2
COL6A2-208ENST00000485591 ATP2B1P20020 1258 aa22.56■■□□□ 1.2
COL6A2-208ENST00000485591 CPT1AP50416 773 aa22.56■■□□□ 1.2
COL6A2-208ENST00000485591 IRX5P78411 483 aaPredicted RBP22.56■■□□□ 1.2
COL6A2-208ENST00000485591 FSCN1Q16658 493 aaKnown RBP22.56■■□□□ 1.2
COL6A2-208ENST00000485591 CCSAPQ6IQ19 270 aaPredicted RBP22.56■■□□□ 1.2
COL6A2-208ENST00000485591 POTEDQ86YR6 584 aa22.56■■□□□ 1.2
COL6A2-208ENST00000485591 PPTC7Q8NI37 304 aa22.56■■□□□ 1.2
COL6A2-208ENST00000485591 SLC5A5Q92911 643 aa22.56■■□□□ 1.2
COL6A2-208ENST00000485591 ZSCAN16Q9H4T2 348 aaPredicted RBP22.56■■□□□ 1.2
COL6A2-208ENST00000485591 BCAS3Q9H6U6 928 aa22.56■■□□□ 1.2
COL6A2-208ENST00000485591 TBC1D22BQ9NU19 505 aa22.56■■□□□ 1.2
COL6A2-208ENST00000485591 TBX3O15119 743 aa22.55■■□□□ 1.2
COL6A2-208ENST00000485591 DHX15O43143 795 aaKnown RBP22.55■■□□□ 1.2
COL6A2-208ENST00000485591 NEMFO60524 1076 aa22.55■■□□□ 1.2
COL6A2-208ENST00000485591 ZSCAN22P10073 491 aaPredicted RBP22.55■■□□□ 1.2
COL6A2-208ENST00000485591 AFG1LQ8WV93 481 aa22.55■■□□□ 1.2
COL6A2-208ENST00000485591 SPATA33Q96N06 139 aa22.55■■□□□ 1.2
COL6A2-208ENST00000485591 RIT2Q99578 217 aa22.55■■□□□ 1.2
COL6A2-208ENST00000485591 JPH1Q9HDC5 661 aaPredicted RBP22.55■■□□□ 1.2
COL6A2-208ENST00000485591 WDR81Q562E7 1941 aa22.55■■□□□ 1.2
COL6A2-208ENST00000485591 KBTBD13C9JR72 458 aa22.54■■□□□ 1.2
COL6A2-208ENST00000485591 SORBS3O60504 671 aa22.54■■□□□ 1.2
COL6A2-208ENST00000485591 MYCNP04198 464 aaPredicted RBP22.54■■□□□ 1.2
COL6A2-208ENST00000485591 MMP3P08254 477 aa22.54■■□□□ 1.2
COL6A2-208ENST00000485591 EN2P19622 333 aaPredicted RBP22.54■■□□□ 1.2
COL6A2-208ENST00000485591 MCM7P33993 719 aa22.54■■□□□ 1.2
COL6A2-208ENST00000485591 MNX1P50219 401 aaPredicted RBP22.54■■□□□ 1.2
COL6A2-208ENST00000485591 BEX3Q00994 111 aa22.54■■□□□ 1.2
COL6A2-208ENST00000485591 PKP1Q13835 747 aa22.54■■□□□ 1.2
COL6A2-208ENST00000485591 HSDL1Q3SXM5 330 aa22.54■■□□□ 1.2
COL6A2-208ENST00000485591 BRDTQ58F21 947 aaPredicted RBP22.54■■□□□ 1.2
COL6A2-208ENST00000485591 GNASQ5JWF2 1037 aa22.54■■□□□ 1.2
COL6A2-208ENST00000485591 PCSK9Q8NBP7 692 aaKnown RBP22.54■■□□□ 1.2
COL6A2-208ENST00000485591 FAM20AQ96MK3 541 aa22.54■■□□□ 1.2
COL6A2-208ENST00000485591 TSEN34Q9BSV6 310 aaKnown RBP22.54■■□□□ 1.2
COL6A2-208ENST00000485591 SLC9A2Q9UBY0 812 aa22.54■■□□□ 1.2
COL6A2-208ENST00000485591 DAXXQ9UER7 740 aaPredicted RBP22.54■■□□□ 1.2
COL6A2-208ENST00000485591 ZEB2O60315 1214 aa22.53■■□□□ 1.2
COL6A2-208ENST00000485591 HOXD8P13378 290 aaPredicted RBP22.53■■□□□ 1.2
COL6A2-208ENST00000485591 SOX10P56693 466 aa22.53■■□□□ 1.2
COL6A2-208ENST00000485591 NBR1Q14596 966 aa22.53■■□□□ 1.2
COL6A2-208ENST00000485591 LRCH2Q5VUJ6 765 aa22.53■■□□□ 1.2
COL6A2-208ENST00000485591 UIMC1Q96RL1 719 aa22.53■■□□□ 1.2
COL6A2-208ENST00000485591 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.53■■□□□ 1.2
COL6A2-208ENST00000485591 PCDHB6Q9Y5E3 794 aa22.53■■□□□ 1.2
COL6A2-208ENST00000485591 BRCA2P51587 3418 aa22.53■■□□□ 1.2
COL6A2-208ENST00000485591 MOXD2PA6NHM9 499 aa22.52■■□□□ 1.2
COL6A2-208ENST00000485591 NOP56O00567 594 aaKnown RBP22.52■■□□□ 1.2
COL6A2-208ENST00000485591 GAS7O60861 476 aa22.52■■□□□ 1.2
COL6A2-208ENST00000485591 PSMD10O75832 226 aa22.52■■□□□ 1.2
COL6A2-208ENST00000485591 F13A1P00488 732 aa22.52■■□□□ 1.2
COL6A2-208ENST00000485591 DDIT3P35638 169 aa22.52■■□□□ 1.2
COL6A2-208ENST00000485591 ZNF174Q15697 407 aa22.52■■□□□ 1.2
COL6A2-208ENST00000485591 KCNA10Q16322 511 aa22.52■■□□□ 1.2
COL6A2-208ENST00000485591 CALCRLQ16602 461 aa22.52■■□□□ 1.2
COL6A2-208ENST00000485591 SLFN12Q8IYM2 578 aa22.52■■□□□ 1.2
COL6A2-208ENST00000485591 HAS1Q92839 578 aa22.52■■□□□ 1.2
COL6A2-208ENST00000485591 GPR20Q99678 358 aa22.52■■□□□ 1.2
COL6A2-208ENST00000485591 TEKT3Q9BXF9 490 aa22.52■■□□□ 1.2
COL6A2-208ENST00000485591 POLR3EQ9NVU0 708 aa22.52■■□□□ 1.2
COL6A2-208ENST00000485591 PHF24Q9UPV7 400 aa22.52■■□□□ 1.2
COL6A2-208ENST00000485591 DDX39AO00148 427 aaKnown RBP22.51■■□□□ 1.19
COL6A2-208ENST00000485591 KPNA6O60684 536 aa22.51■■□□□ 1.19
COL6A2-208ENST00000485591 BAG4O95429 457 aaKnown RBP22.51■■□□□ 1.19
COL6A2-208ENST00000485591 BRD1O95696 1058 aa22.51■■□□□ 1.19
COL6A2-208ENST00000485591 ASGR1P07306 291 aa22.51■■□□□ 1.19
COL6A2-208ENST00000485591 ACLYP53396 1101 aa22.51■■□□□ 1.19
COL6A2-208ENST00000485591 KRT76Q01546 638 aa22.51■■□□□ 1.19
COL6A2-208ENST00000485591 SP4Q02446 784 aa22.51■■□□□ 1.19
COL6A2-208ENST00000485591 DGKDQ16760 1214 aa22.51■■□□□ 1.19
COL6A2-208ENST00000485591 GJA10Q969M2 543 aa22.51■■□□□ 1.19
COL6A2-208ENST00000485591 MTMR9Q96QG7 549 aa22.51■■□□□ 1.19
COL6A2-208ENST00000485591 TCEAL9Q9UHQ7 104 aa22.51■■□□□ 1.19
COL6A2-208ENST00000485591 TELO2Q9Y4R8 837 aa22.51■■□□□ 1.19
COL6A2-208ENST00000485591 ELP1O95163 1332 aa22.51■■□□□ 1.19
COL6A2-208ENST00000485591 SCN10AQ9Y5Y9 1956 aa22.5■■□□□ 1.19
COL6A2-208ENST00000485591 MARCH6O60337 910 aa22.5■■□□□ 1.19
COL6A2-208ENST00000485591 PPFIA4O75335 1185 aa22.5■■□□□ 1.19
COL6A2-208ENST00000485591 CCNE2O96020 404 aa22.5■■□□□ 1.19
COL6A2-208ENST00000485591 PURAQ00577 322 aaKnown RBP22.5■■□□□ 1.19
COL6A2-208ENST00000485591 ZNF746Q6NUN9 644 aaPredicted RBP22.5■■□□□ 1.19
COL6A2-208ENST00000485591 TMEM60Q9H2L4 133 aa22.5■■□□□ 1.19
COL6A2-208ENST00000485591 GSTTP1A0A1W2PQM5 241 aa22.49■■□□□ 1.19
COL6A2-208ENST00000485591 LAD1O00515 517 aa22.49■■□□□ 1.19
COL6A2-208ENST00000485591 OR52Z1P0C646 297 aa22.49■■□□□ 1.19
COL6A2-208ENST00000485591 COL6A1P12109 1028 aa22.49■■□□□ 1.19
COL6A2-208ENST00000485591 ACTR2P61160 394 aa22.49■■□□□ 1.19
COL6A2-208ENST00000485591 FOXD4L5Q5VV16 416 aaPredicted RBP22.49■■□□□ 1.19
COL6A2-208ENST00000485591 FAM173BQ6P4H8 233 aa22.49■■□□□ 1.19
COL6A2-208ENST00000485591 B3GNT9Q6UX72 402 aa22.49■■□□□ 1.19
COL6A2-208ENST00000485591 UBE2Q1Q7Z7E8 422 aa22.49■■□□□ 1.19
COL6A2-208ENST00000485591 SMAP1Q8IYB5 467 aaPredicted RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms