RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	ERBB2	P04626	1255 aa		5.77	□□□□□ -1.49
VPS8-223	ENST00000485024	ITGB6	P18564	788 aa		5.77	□□□□□ -1.49
VPS8-223	ENST00000485024	PPP2R5D	Q14738	602 aa		5.77	□□□□□ -1.49
VPS8-223	ENST00000485024	MBLAC2	Q68D91	279 aa		5.77	□□□□□ -1.49
VPS8-223	ENST00000485024	TRMT10B	Q6PF06	316 aa	Known RBP	5.77	□□□□□ -1.49
VPS8-223	ENST00000485024	MILR1	Q7Z6M3	343 aa		5.77	□□□□□ -1.49
VPS8-223	ENST00000485024	RALYL	Q86SE5	291 aa	Known RBP	5.77	□□□□□ -1.49
VPS8-223	ENST00000485024	TAX1BP1	Q86VP1	789 aa		5.77	□□□□□ -1.49
VPS8-223	ENST00000485024	CKAP2L	Q8IYA6	745 aa		5.77	□□□□□ -1.49
VPS8-223	ENST00000485024	SEC14L1	Q92503	715 aa		5.77	□□□□□ -1.49
VPS8-223	ENST00000485024	DPF3	Q92784	378 aa		5.77	□□□□□ -1.49
VPS8-223	ENST00000485024	SMARCC1	Q92922	1105 aa	Predicted RBP	5.77	□□□□□ -1.49
VPS8-223	ENST00000485024	DNAJC2	Q99543	621 aa	Known RBP	5.77	□□□□□ -1.49
VPS8-223	ENST00000485024	NGRN	Q9NPE2	291 aa	Known RBP	5.77	□□□□□ -1.49
VPS8-223	ENST00000485024	COPRS	Q9NQ92	184 aa		5.77	□□□□□ -1.49
VPS8-223	ENST00000485024	FAM86C1	Q9NVL1	165 aa		5.77	□□□□□ -1.49
VPS8-223	ENST00000485024	MARCH2	Q9P0N8	246 aa		5.77	□□□□□ -1.49
VPS8-223	ENST00000485024	RIMBP3C	A6NJZ7	1639 aa		5.77	□□□□□ -1.49
VPS8-223	ENST00000485024	RIMBP3B	A6NNM3	1639 aa		5.77	□□□□□ -1.49
VPS8-223	ENST00000485024	RIMBP3	Q9UFD9	1639 aa		5.77	□□□□□ -1.49
VPS8-223	ENST00000485024	NPHS1	O60500	1241 aa		5.76	□□□□□ -1.49
VPS8-223	ENST00000485024	RAMP2	O60895	175 aa		5.76	□□□□□ -1.49
VPS8-223	ENST00000485024	TP53	P04637	393 aa	Predicted RBP	5.76	□□□□□ -1.49
VPS8-223	ENST00000485024	FGR	P09769	529 aa		5.76	□□□□□ -1.49
VPS8-223	ENST00000485024	ITGA4	P13612	1032 aa		5.76	□□□□□ -1.49
VPS8-223	ENST00000485024	MRPS21	P82921	87 aa	Known RBP	5.76	□□□□□ -1.49
VPS8-223	ENST00000485024	LRRFIP1	Q32MZ4	808 aa	Known RBP	5.76	□□□□□ -1.49
VPS8-223	ENST00000485024	MCF2L2	Q86YR7	1114 aa		5.76	□□□□□ -1.49
VPS8-223	ENST00000485024	FAM177A1	Q8N128	213 aa	Predicted RBP	5.76	□□□□□ -1.49
VPS8-223	ENST00000485024	TMEFF2	Q9UIK5	374 aa	Predicted RBP	5.76	□□□□□ -1.49
VPS8-223	ENST00000485024	TMA7	Q9Y2S6	64 aa	Known RBP	5.76	□□□□□ -1.49
VPS8-223	ENST00000485024	HSP90B1	P14625	803 aa	Known RBP	5.75	□□□□□ -1.49
VPS8-223	ENST00000485024	NCL	P19338	710 aa	Known RBP	5.75	□□□□□ -1.49
VPS8-223	ENST00000485024	MAK	P20794	623 aa		5.75	□□□□□ -1.49
VPS8-223	ENST00000485024	SEPHS1	P49903	392 aa		5.75	□□□□□ -1.49
VPS8-223	ENST00000485024	NFE2L2	Q16236	605 aa		5.75	□□□□□ -1.49
VPS8-223	ENST00000485024	SEZ6	Q53EL9	994 aa		5.75	□□□□□ -1.49
VPS8-223	ENST00000485024	REXO1	Q8N1G1	1221 aa	Known RBP	5.75	□□□□□ -1.49
VPS8-223	ENST00000485024	ZNF296	Q8WUU4	475 aa	Predicted RBP	5.75	□□□□□ -1.49
VPS8-223	ENST00000485024	PUS7	Q96PZ0	661 aa	Known RBP	5.75	□□□□□ -1.49
VPS8-223	ENST00000485024	NPHP3-ACAD11	A0A0J9YXS1	232 aa		5.74	□□□□□ -1.49
VPS8-223	ENST00000485024	CYP7B1	O75881	506 aa		5.74	□□□□□ -1.49
VPS8-223	ENST00000485024	SLC6A11	P48066	632 aa		5.74	□□□□□ -1.49
VPS8-223	ENST00000485024	RGS19	P49795	217 aa		5.74	□□□□□ -1.49
VPS8-223	ENST00000485024	TEX2	Q8IWB9	1127 aa		5.74	□□□□□ -1.49
VPS8-223	ENST00000485024	ADAMTS1	Q9UHI8	967 aa		5.74	□□□□□ -1.49
VPS8-223	ENST00000485024	R3HCC1	Q9Y3T6	440 aa	Known RBP	5.74	□□□□□ -1.49
VPS8-223	ENST00000485024	BACE2	Q9Y5Z0	518 aa		5.74	□□□□□ -1.49
VPS8-223	ENST00000485024	C2orf71	A6NGG8	1288 aa		5.73	□□□□□ -1.49
VPS8-223	ENST00000485024	CBFA2T2	O43439	604 aa		5.73	□□□□□ -1.49
VPS8-223	ENST00000485024	VAMP4	O75379	141 aa		5.73	□□□□□ -1.49
VPS8-223	ENST00000485024	KLHL18	O94889	574 aa		5.73	□□□□□ -1.49
VPS8-223	ENST00000485024	THBD	P07204	575 aa		5.73	□□□□□ -1.49
VPS8-223	ENST00000485024	PAM	P19021	973 aa		5.73	□□□□□ -1.49
VPS8-223	ENST00000485024	ADRA1B	P35368	520 aa		5.73	□□□□□ -1.49
VPS8-223	ENST00000485024	APOBR	Q0VD83	1088 aa		5.73	□□□□□ -1.49
VPS8-223	ENST00000485024	DPY19L1	Q2PZI1	675 aa		5.73	□□□□□ -1.49
VPS8-223	ENST00000485024	ZKSCAN2	Q63HK3	967 aa		5.73	□□□□□ -1.49
VPS8-223	ENST00000485024	INTS3	Q68E01	1043 aa	Known RBP	5.73	□□□□□ -1.49
VPS8-223	ENST00000485024	GPR155	Q7Z3F1	870 aa		5.73	□□□□□ -1.49
VPS8-223	ENST00000485024	NTN5	Q8WTR8	489 aa	Predicted RBP	5.73	□□□□□ -1.49
VPS8-223	ENST00000485024	CPLX3	Q8WVH0	158 aa		5.73	□□□□□ -1.49
VPS8-223	ENST00000485024	NKD1	Q969G9	470 aa		5.73	□□□□□ -1.49
VPS8-223	ENST00000485024	CLIP3	Q96DZ5	547 aa		5.73	□□□□□ -1.49
VPS8-223	ENST00000485024	OSBPL2	Q9H1P3	480 aa		5.73	□□□□□ -1.49
VPS8-223	ENST00000485024	DIS3	Q9Y2L1	958 aa	Known RBP	5.73	□□□□□ -1.49
VPS8-223	ENST00000485024	SPATA31D1	Q6ZQQ2	1576 aa		5.72	□□□□□ -1.49
VPS8-223	ENST00000485024		A0A087WZG4	1122 aa		5.72	□□□□□ -1.49
VPS8-223	ENST00000485024	RAD17	O75943	681 aa		5.72	□□□□□ -1.49
VPS8-223	ENST00000485024	IMPDH2	P12268	514 aa		5.72	□□□□□ -1.49
VPS8-223	ENST00000485024	ACRV1	P26436	265 aa		5.72	□□□□□ -1.49
VPS8-223	ENST00000485024	SOX9	P48436	509 aa		5.72	□□□□□ -1.49
VPS8-223	ENST00000485024	NASP	P49321	788 aa	Predicted RBP	5.72	□□□□□ -1.49
VPS8-223	ENST00000485024	CCDC144B	Q3MJ40	725 aa		5.72	□□□□□ -1.49
VPS8-223	ENST00000485024	MAMDC4	Q6UXC1	1216 aa		5.72	□□□□□ -1.49
VPS8-223	ENST00000485024	ADCY4	Q8NFM4	1077 aa		5.72	□□□□□ -1.49
VPS8-223	ENST00000485024	PMFBP1	Q8TBY8	1022 aa		5.72	□□□□□ -1.49
VPS8-223	ENST00000485024	NEIL1	Q96FI4	390 aa	Predicted RBP	5.72	□□□□□ -1.49
VPS8-223	ENST00000485024	PRRX2	Q99811	253 aa		5.72	□□□□□ -1.49
VPS8-223	ENST00000485024	YIPF4	Q9BSR8	244 aa		5.72	□□□□□ -1.49
VPS8-223	ENST00000485024	TTPAL	Q9BTX7	342 aa		5.72	□□□□□ -1.49
VPS8-223	ENST00000485024	UBP1	Q9NZI7	540 aa		5.72	□□□□□ -1.49
VPS8-223	ENST00000485024	EFR3B	Q9Y2G0	817 aa		5.72	□□□□□ -1.49
VPS8-223	ENST00000485024	CADPS	Q9ULU8	1353 aa		5.71	□□□□□ -1.5
VPS8-223	ENST00000485024	CLSTN1	O94985	981 aa		5.71	□□□□□ -1.5
VPS8-223	ENST00000485024	CSF2RB	P32927	897 aa		5.71	□□□□□ -1.5
VPS8-223	ENST00000485024	ZNF165	P49910	485 aa		5.71	□□□□□ -1.5
VPS8-223	ENST00000485024	TNNI3K	Q59H18	835 aa		5.71	□□□□□ -1.5
VPS8-223	ENST00000485024	TEPP	Q6URK8	271 aa		5.71	□□□□□ -1.5
VPS8-223	ENST00000485024		Q6ZUG5	572 aa		5.71	□□□□□ -1.5
VPS8-223	ENST00000485024	SLITRK4	Q8IW52	837 aa		5.71	□□□□□ -1.5
VPS8-223	ENST00000485024	MKL1	Q969V6	931 aa		5.71	□□□□□ -1.5
VPS8-223	ENST00000485024	MRFAP1L1	Q96HT8	127 aa		5.71	□□□□□ -1.5
VPS8-223	ENST00000485024	WRNIP1	Q96S55	665 aa		5.71	□□□□□ -1.5
VPS8-223	ENST00000485024	TMEM209	Q96SK2	561 aa		5.71	□□□□□ -1.5
VPS8-223	ENST00000485024	CRBN	Q96SW2	442 aa		5.71	□□□□□ -1.5
VPS8-223	ENST00000485024	ZSWIM4	Q9H7M6	989 aa		5.71	□□□□□ -1.5
VPS8-223	ENST00000485024	SYNJ2	O15056	1496 aa		5.71	□□□□□ -1.5
VPS8-223	ENST00000485024	C22orf46	C9J442	243 aa		5.7	□□□□□ -1.5
VPS8-223	ENST00000485024	FOXN1	O15353	648 aa		5.7	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms