RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 NBPF3Q9H094 633 aa16.4■□□□□ 0.22
RXRA-203ENST00000484822 HAUS2Q9NVX0 235 aa16.4■□□□□ 0.22
RXRA-203ENST00000484822 GOLGA8HP0CJ92 632 aa16.4■□□□□ 0.22
RXRA-203ENST00000484822 GABPAQ06546 454 aa16.4■□□□□ 0.22
RXRA-203ENST00000484822 DCLK2Q8N568 766 aa16.4■□□□□ 0.22
RXRA-203ENST00000484822 P2RX5Q93086 422 aa16.4■□□□□ 0.22
RXRA-203ENST00000484822 PDLIM2Q96JY6 352 aa16.4■□□□□ 0.22
RXRA-203ENST00000484822 FMO2Q99518 471 aa16.4■□□□□ 0.22
RXRA-203ENST00000484822 FAM167BQ9BTA0 163 aa16.4■□□□□ 0.22
RXRA-203ENST00000484822 MSH2P43246 934 aa16.39■□□□□ 0.21
RXRA-203ENST00000484822 LRRC41Q15345 812 aa16.39■□□□□ 0.21
RXRA-203ENST00000484822 PLAAQ9Y263 795 aa16.39■□□□□ 0.21
RXRA-203ENST00000484822 BZW2Q9Y6E2 419 aaKnown RBP16.39■□□□□ 0.21
RXRA-203ENST00000484822 ADAMTS13Q76LX8 1427 aa16.39■□□□□ 0.21
RXRA-203ENST00000484822 JCADQ9P266 1359 aa16.39■□□□□ 0.21
RXRA-203ENST00000484822 PIK3C2BO00750 1634 aa16.39■□□□□ 0.21
RXRA-203ENST00000484822 TADA3O75528 432 aa16.39■□□□□ 0.21
RXRA-203ENST00000484822 PDE1BQ01064 536 aa16.39■□□□□ 0.21
RXRA-203ENST00000484822 CCDC144BQ3MJ40 725 aa16.39■□□□□ 0.21
RXRA-203ENST00000484822 NLRX1Q86UT6 975 aa16.39■□□□□ 0.21
RXRA-203ENST00000484822 ZC3H18Q86VM9 953 aaKnown RBP16.39■□□□□ 0.21
RXRA-203ENST00000484822 FAM178BQ8IXR5 827 aa16.39■□□□□ 0.21
RXRA-203ENST00000484822 YY1AP1Q9H869 796 aa16.39■□□□□ 0.21
RXRA-203ENST00000484822 PTPRUQ92729 1446 aa16.39■□□□□ 0.21
RXRA-203ENST00000484822 LOC102724159A0A0B4J2E5 919 aa16.39■□□□□ 0.21
RXRA-203ENST00000484822 MYO1FO00160 1098 aa16.39■□□□□ 0.21
RXRA-203ENST00000484822 GAS7O60861 476 aa16.39■□□□□ 0.21
RXRA-203ENST00000484822 CDC25AP30304 524 aa16.39■□□□□ 0.21
RXRA-203ENST00000484822 PWP2Q15269 919 aaKnown RBP16.39■□□□□ 0.21
RXRA-203ENST00000484822 FAM133AQ8N9E0 248 aa16.39■□□□□ 0.21
RXRA-203ENST00000484822 SLFN14P0C7P3 912 aa16.39■□□□□ 0.21
RXRA-203ENST00000484822 ZBED6P86452 979 aa16.39■□□□□ 0.21
RXRA-203ENST00000484822 SGO2Q562F6 1265 aa16.39■□□□□ 0.21
RXRA-203ENST00000484822 TTBK2Q6IQ55 1244 aa16.39■□□□□ 0.21
RXRA-203ENST00000484822 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.39■□□□□ 0.21
RXRA-203ENST00000484822 SDCCAG3Q96C92 435 aa16.39■□□□□ 0.21
RXRA-203ENST00000484822 C1orf112Q9NSG2 853 aa16.39■□□□□ 0.21
RXRA-203ENST00000484822 DIP2BQ9P265 1576 aa16.38■□□□□ 0.21
RXRA-203ENST00000484822 ECEL1O95672 775 aa16.38■□□□□ 0.21
RXRA-203ENST00000484822 PDHA1P08559 390 aa16.38■□□□□ 0.21
RXRA-203ENST00000484822 DLATP10515 647 aaKnown RBP16.38■□□□□ 0.21
RXRA-203ENST00000484822 RESTQ13127 1097 aa16.38■□□□□ 0.21
RXRA-203ENST00000484822 SUPT20HL1Q3ZLR7 823 aa16.38■□□□□ 0.21
RXRA-203ENST00000484822 PNMA1Q8ND90 353 aa16.38■□□□□ 0.21
RXRA-203ENST00000484822 CEP70Q8NHQ1 597 aa16.38■□□□□ 0.21
RXRA-203ENST00000484822 WDR46O15213 610 aaKnown RBP16.38■□□□□ 0.21
RXRA-203ENST00000484822 GNPTABQ3T906 1256 aa16.38■□□□□ 0.21
RXRA-203ENST00000484822 SPOUT1Q5T280 376 aaKnown RBP16.38■□□□□ 0.21
RXRA-203ENST00000484822 SUSD4Q5VX71 490 aa16.38■□□□□ 0.21
RXRA-203ENST00000484822 APOA5Q6Q788 366 aa16.38■□□□□ 0.21
RXRA-203ENST00000484822 LCA5Q86VQ0 697 aa16.38■□□□□ 0.21
RXRA-203ENST00000484822 HAUS1Q96CS2 278 aa16.38■□□□□ 0.21
RXRA-203ENST00000484822 ESRRAP11474 423 aaPredicted RBP16.38■□□□□ 0.21
RXRA-203ENST00000484822 LMNB1P20700 586 aa16.38■□□□□ 0.21
RXRA-203ENST00000484822 NSFP46459 744 aaKnown RBP16.38■□□□□ 0.21
RXRA-203ENST00000484822 IL1RL1Q01638 556 aa16.38■□□□□ 0.21
RXRA-203ENST00000484822 ANKRD20A4Q4UJ75 823 aa16.38■□□□□ 0.21
RXRA-203ENST00000484822 ANKRD20A8PQ5CZ79 823 aa16.38■□□□□ 0.21
RXRA-203ENST00000484822 ANKRD20A2Q5SQ80 823 aa16.38■□□□□ 0.21
RXRA-203ENST00000484822 ANKRD20A1Q5TYW2 823 aa16.38■□□□□ 0.21
RXRA-203ENST00000484822 KRT80Q6KB66 452 aa16.38■□□□□ 0.21
RXRA-203ENST00000484822 TTLL11Q8NHH1 800 aa16.38■□□□□ 0.21
RXRA-203ENST00000484822 CCHCR1Q8TD31 782 aa16.38■□□□□ 0.21
RXRA-203ENST00000484822 KCNV2Q8TDN2 545 aa16.38■□□□□ 0.21
RXRA-203ENST00000484822 DHTKD1Q96HY7 919 aaPredicted RBP16.38■□□□□ 0.21
RXRA-203ENST00000484822 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.38■□□□□ 0.21
RXRA-203ENST00000484822 MED23Q9ULK4 1368 aa16.38■□□□□ 0.21
RXRA-203ENST00000484822 ADRA2BP18089 450 aa16.38■□□□□ 0.21
RXRA-203ENST00000484822 NR2F2P24468 414 aa16.38■□□□□ 0.21
RXRA-203ENST00000484822 TRIP13Q15645 432 aaPredicted RBP16.38■□□□□ 0.21
RXRA-203ENST00000484822 GRAMD1BQ3KR37 738 aa16.38■□□□□ 0.21
RXRA-203ENST00000484822 SMYD2Q9NRG4 433 aa16.38■□□□□ 0.21
RXRA-203ENST00000484822 DNAJC17Q9NVM6 304 aaKnown RBP16.38■□□□□ 0.21
RXRA-203ENST00000484822 ANAPC5Q9UJX4 755 aa16.38■□□□□ 0.21
RXRA-203ENST00000484822 PCDHA13Q9Y5I0 950 aa16.38■□□□□ 0.21
RXRA-203ENST00000484822 SGK1O00141 431 aa16.37■□□□□ 0.21
RXRA-203ENST00000484822 STAM2O75886 525 aa16.37■□□□□ 0.21
RXRA-203ENST00000484822 MYO1EQ12965 1108 aa16.37■□□□□ 0.21
RXRA-203ENST00000484822 NR5A1Q13285 461 aa16.37■□□□□ 0.21
RXRA-203ENST00000484822 MAN2A1Q16706 1144 aa16.37■□□□□ 0.21
RXRA-203ENST00000484822 NSMFQ6X4W1 530 aa16.37■□□□□ 0.21
RXRA-203ENST00000484822 ZMYND12Q9H0C1 365 aa16.37■□□□□ 0.21
RXRA-203ENST00000484822 SRP68Q9UHB9 627 aaKnown RBP16.37■□□□□ 0.21
RXRA-203ENST00000484822 SCINQ9Y6U3 715 aa16.37■□□□□ 0.21
RXRA-203ENST00000484822 MFAP3LO75121 409 aa16.37■□□□□ 0.21
RXRA-203ENST00000484822 DNAJC8O75937 253 aaPredicted RBP16.37■□□□□ 0.21
RXRA-203ENST00000484822 MMEP08473 750 aa16.37■□□□□ 0.21
RXRA-203ENST00000484822 SCNN1DP51172 638 aa16.37■□□□□ 0.21
RXRA-203ENST00000484822 HDLBPQ00341 1268 aaKnown RBP16.37■□□□□ 0.21
RXRA-203ENST00000484822 SARM1Q6SZW1 724 aa16.37■□□□□ 0.21
RXRA-203ENST00000484822 NARFQ9UHQ1 456 aa16.37■□□□□ 0.21
RXRA-203ENST00000484822 FRMPD1Q5SYB0 1578 aa16.37■□□□□ 0.21
RXRA-203ENST00000484822 K7ENM7 598 aa16.37■□□□□ 0.21
RXRA-203ENST00000484822 TTC4O95801 387 aa16.37■□□□□ 0.21
RXRA-203ENST00000484822 KRT3P12035 628 aa16.37■□□□□ 0.21
RXRA-203ENST00000484822 KIF11P52732 1056 aa16.37■□□□□ 0.21
RXRA-203ENST00000484822 GRAPQ13588 217 aa16.37■□□□□ 0.21
RXRA-203ENST00000484822 PRKG1Q13976 671 aa16.37■□□□□ 0.21
RXRA-203ENST00000484822 GRAPLQ8TC17 118 aaPredicted RBP16.37■□□□□ 0.21
RXRA-203ENST00000484822 FOXP1Q9H334 677 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms