RNA–Protein interactions for RNA: ENST00000484254.1

CNTNAP3B-208, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 742 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-208ENST00000484254 SUPT20HL2P0C7V6 817 aa25.28■■□□□ 1.64
CNTNAP3B-208ENST00000484254 PSEN2P49810 448 aa25.28■■□□□ 1.64
CNTNAP3B-208ENST00000484254 CHMP4BP1P59074 171 aa25.28■■□□□ 1.64
CNTNAP3B-208ENST00000484254 SESTD1Q86VW0 696 aa25.28■■□□□ 1.64
CNTNAP3B-208ENST00000484254 TDHQ8IZJ6 230 aa25.28■■□□□ 1.64
CNTNAP3B-208ENST00000484254 NECAB1Q8N987 351 aa25.28■■□□□ 1.64
CNTNAP3B-208ENST00000484254 CYP2W1Q8TAV3 490 aa25.28■■□□□ 1.64
CNTNAP3B-208ENST00000484254 PPP1R13LQ8WUF5 828 aa25.28■■□□□ 1.64
CNTNAP3B-208ENST00000484254 GTF3C6Q969F1 213 aa25.28■■□□□ 1.64
CNTNAP3B-208ENST00000484254 GPR20Q99678 358 aa25.28■■□□□ 1.64
CNTNAP3B-208ENST00000484254 TRMT13Q9NUP7 481 aaKnown RBP25.28■■□□□ 1.64
CNTNAP3B-208ENST00000484254 DOCK5Q9H7D0 1870 aa25.28■■□□□ 1.64
CNTNAP3B-208ENST00000484254 CTDNEP1O95476 244 aa25.27■■□□□ 1.64
CNTNAP3B-208ENST00000484254 CYP3A4P08684 503 aa25.27■■□□□ 1.64
CNTNAP3B-208ENST00000484254 MFSD10Q14728 455 aa25.27■■□□□ 1.64
CNTNAP3B-208ENST00000484254 MFSD5Q6N075 450 aa25.27■■□□□ 1.64
CNTNAP3B-208ENST00000484254 AIFM3Q96NN9 605 aa25.27■■□□□ 1.64
CNTNAP3B-208ENST00000484254 C16orf70Q9BSU1 422 aa25.27■■□□□ 1.64
CNTNAP3B-208ENST00000484254 KCNH7Q9NS40 1196 aa25.27■■□□□ 1.64
CNTNAP3B-208ENST00000484254 MEIS1O00470 390 aa25.26■■□□□ 1.63
CNTNAP3B-208ENST00000484254 ZNF76P36508 570 aa25.26■■□□□ 1.63
CNTNAP3B-208ENST00000484254 FPGSQ05932 587 aa25.26■■□□□ 1.63
CNTNAP3B-208ENST00000484254 KIAA0753Q2KHM9 967 aa25.26■■□□□ 1.63
CNTNAP3B-208ENST00000484254 NIPA1Q7RTP0 329 aa25.26■■□□□ 1.63
CNTNAP3B-208ENST00000484254 RASGRP4Q8TDF6 673 aa25.26■■□□□ 1.63
CNTNAP3B-208ENST00000484254 NOC4LQ9BVI4 516 aaKnown RBP25.26■■□□□ 1.63
CNTNAP3B-208ENST00000484254 PPP1R12CQ9BZL4 782 aa25.26■■□□□ 1.63
CNTNAP3B-208ENST00000484254 HIPK3Q9H422 1215 aa25.26■■□□□ 1.63
CNTNAP3B-208ENST00000484254 PCDHA4Q9UN74 947 aa25.26■■□□□ 1.63
CNTNAP3B-208ENST00000484254 LGALS2P05162 132 aa25.25■■□□□ 1.63
CNTNAP3B-208ENST00000484254 GALNT17Q6IS24 598 aa25.25■■□□□ 1.63
CNTNAP3B-208ENST00000484254 ALG1Q9BT22 464 aa25.25■■□□□ 1.63
CNTNAP3B-208ENST00000484254 PKD2L1Q9P0L9 805 aa25.25■■□□□ 1.63
CNTNAP3B-208ENST00000484254 TELO2Q9Y4R8 837 aa25.25■■□□□ 1.63
CNTNAP3B-208ENST00000484254 ARP10275 920 aa25.24■■□□□ 1.63
CNTNAP3B-208ENST00000484254 CYP2C18P33260 490 aa25.24■■□□□ 1.63
CNTNAP3B-208ENST00000484254 FXR1P51114 621 aaKnown RBP eCLIP25.24■■□□□ 1.63
CNTNAP3B-208ENST00000484254 SP4Q02446 784 aa25.24■■□□□ 1.63
CNTNAP3B-208ENST00000484254 C7orf31Q8N865 590 aa25.24■■□□□ 1.63
CNTNAP3B-208ENST00000484254 DAGLBQ8NCG7 672 aa25.24■■□□□ 1.63
CNTNAP3B-208ENST00000484254 AGO4Q9HCK5 861 aaKnown RBP25.24■■□□□ 1.63
CNTNAP3B-208ENST00000484254 ORC3Q9UBD5 711 aaPredicted RBP25.24■■□□□ 1.63
CNTNAP3B-208ENST00000484254 HDAC6Q9UBN7 1215 aa25.24■■□□□ 1.63
CNTNAP3B-208ENST00000484254 LIMCH1Q9UPQ0 1083 aa25.24■■□□□ 1.63
CNTNAP3B-208ENST00000484254 FAM86B1E9PN63 330 aa25.23■■□□□ 1.63
CNTNAP3B-208ENST00000484254 H3BRB1 525 aa25.23■■□□□ 1.63
CNTNAP3B-208ENST00000484254 FAM86B2P0C5J1 330 aa25.23■■□□□ 1.63
CNTNAP3B-208ENST00000484254 CYP2C9P11712 490 aa25.23■■□□□ 1.63
CNTNAP3B-208ENST00000484254 NPY5RQ15761 445 aa25.23■■□□□ 1.63
CNTNAP3B-208ENST00000484254 GDF6Q6KF10 455 aaPredicted RBP25.23■■□□□ 1.63
CNTNAP3B-208ENST00000484254 BLIDQ8IZY5 108 aa25.23■■□□□ 1.63
CNTNAP3B-208ENST00000484254 TMEM199Q8N511 208 aa25.23■■□□□ 1.63
CNTNAP3B-208ENST00000484254 WASF1Q92558 559 aa25.23■■□□□ 1.63
CNTNAP3B-208ENST00000484254 TUT1Q9H6E5 874 aaKnown RBP25.23■■□□□ 1.63
CNTNAP3B-208ENST00000484254 UPF2Q9HAU5 1272 aaKnown RBP25.23■■□□□ 1.63
CNTNAP3B-208ENST00000484254 GTF2IRD1Q9UHL9 959 aa25.23■■□□□ 1.63
CNTNAP3B-208ENST00000484254 NFASCO94856 1347 aa25.22■■□□□ 1.63
CNTNAP3B-208ENST00000484254 UMODL1Q5DID0 1318 aa25.22■■□□□ 1.63
CNTNAP3B-208ENST00000484254 IGLV3-22A0A075B6J6 115 aa25.22■■□□□ 1.63
CNTNAP3B-208ENST00000484254 M0R2N6 131 aa25.22■■□□□ 1.63
CNTNAP3B-208ENST00000484254 DTNBO60941 627 aa25.22■■□□□ 1.63
CNTNAP3B-208ENST00000484254 EPHB4P54760 987 aa25.22■■□□□ 1.63
CNTNAP3B-208ENST00000484254 PTGISQ16647 500 aa25.22■■□□□ 1.63
CNTNAP3B-208ENST00000484254 PLA2G4DQ86XP0 818 aa25.22■■□□□ 1.63
CNTNAP3B-208ENST00000484254 SEPT1Q8WYJ6 367 aa25.22■■□□□ 1.63
CNTNAP3B-208ENST00000484254 SDF4Q9BRK5 362 aa25.22■■□□□ 1.63
CNTNAP3B-208ENST00000484254 PHF20Q9BVI0 1012 aa25.22■■□□□ 1.63
CNTNAP3B-208ENST00000484254 JPH1Q9HDC5 661 aaPredicted RBP25.22■■□□□ 1.63
CNTNAP3B-208ENST00000484254 NOD1Q9Y239 953 aa25.22■■□□□ 1.63
CNTNAP3B-208ENST00000484254 GSTTP1A0A1W2PQM5 241 aa25.21■■□□□ 1.63
CNTNAP3B-208ENST00000484254 FDPSP14324 419 aaKnown RBP25.21■■□□□ 1.63
CNTNAP3B-208ENST00000484254 XBP1P17861 261 aa25.21■■□□□ 1.63
CNTNAP3B-208ENST00000484254 CIITAP33076 1130 aa25.21■■□□□ 1.63
CNTNAP3B-208ENST00000484254 TCF7P36402 384 aaPredicted RBP25.21■■□□□ 1.63
CNTNAP3B-208ENST00000484254 LRIT3Q3SXY7 679 aa25.21■■□□□ 1.63
CNTNAP3B-208ENST00000484254 NSUN7Q8NE18 718 aaKnown RBP25.21■■□□□ 1.63
CNTNAP3B-208ENST00000484254 SLC9A2Q9UBY0 812 aa25.21■■□□□ 1.63
CNTNAP3B-208ENST00000484254 KCNJ14Q9UNX9 436 aa25.21■■□□□ 1.63
CNTNAP3B-208ENST00000484254 CSF2RAP15509 400 aa25.2■■□□□ 1.62
CNTNAP3B-208ENST00000484254 USP11P51784 963 aa25.2■■□□□ 1.62
CNTNAP3B-208ENST00000484254 ITGB3BPQ13352 177 aaPredicted RBP25.2■■□□□ 1.62
CNTNAP3B-208ENST00000484254 PPIGQ13427 754 aaKnown RBP eCLIP25.2■■□□□ 1.62
CNTNAP3B-208ENST00000484254 SHHQ15465 462 aa25.2■■□□□ 1.62
CNTNAP3B-208ENST00000484254 C9orf50Q5SZB4 431 aa25.2■■□□□ 1.62
CNTNAP3B-208ENST00000484254 UTP14CQ5TAP6 766 aaKnown RBP25.2■■□□□ 1.62
CNTNAP3B-208ENST00000484254 CTAGE1Q96RT6 745 aa25.2■■□□□ 1.62
CNTNAP3B-208ENST00000484254 WNT8AQ9H1J5 351 aa25.2■■□□□ 1.62
CNTNAP3B-208ENST00000484254 ZNF215Q9UL58 517 aaPredicted RBP25.2■■□□□ 1.62
CNTNAP3B-208ENST00000484254 CCL23P55773 120 aa25.19■■□□□ 1.62
CNTNAP3B-208ENST00000484254 SETQ01105 290 aaPredicted RBP25.19■■□□□ 1.62
CNTNAP3B-208ENST00000484254 ST3GAL1Q11201 340 aa25.19■■□□□ 1.62
CNTNAP3B-208ENST00000484254 RABEP1Q15276 862 aa25.19■■□□□ 1.62
CNTNAP3B-208ENST00000484254 TRIM50Q86XT4 487 aa25.19■■□□□ 1.62
CNTNAP3B-208ENST00000484254 ZSCAN31Q96LW9 406 aaPredicted RBP25.19■■□□□ 1.62
CNTNAP3B-208ENST00000484254 PITPNM1O00562 1244 aa25.18■■□□□ 1.62
CNTNAP3B-208ENST00000484254 EDIL3O43854 480 aa25.18■■□□□ 1.62
CNTNAP3B-208ENST00000484254 TBCKQ8TEA7 893 aa25.18■■□□□ 1.62
CNTNAP3B-208ENST00000484254 GJB4Q9NTQ9 266 aa25.18■■□□□ 1.62
CNTNAP3B-208ENST00000484254 GTF3C3Q9Y5Q9 886 aa25.18■■□□□ 1.62
CNTNAP3B-208ENST00000484254 SMIM10L2AP0DMW4 78 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms