RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 ANKLE1Q8NAG6 615 aa7.89□□□□□ -1.15
BRCA1-216ENST00000484087 IL31RAQ8NI17 732 aa7.89□□□□□ -1.15
BRCA1-216ENST00000484087 USP28Q96RU2 1077 aa7.89□□□□□ -1.15
BRCA1-216ENST00000484087 HTATIP2Q9BUP3 242 aa7.89□□□□□ -1.15
BRCA1-216ENST00000484087 NUP62CLQ9H1M0 184 aa7.89□□□□□ -1.15
BRCA1-216ENST00000484087 POLR3EQ9NVU0 708 aa7.89□□□□□ -1.15
BRCA1-216ENST00000484087 ATP11BQ9Y2G3 1177 aa7.89□□□□□ -1.15
BRCA1-216ENST00000484087 ABCB11O95342 1321 aa7.89□□□□□ -1.15
BRCA1-216ENST00000484087 A0A1W2PQ45 241 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-216ENST00000484087 A0A1W2PQY0 241 aa7.88□□□□□ -1.15
BRCA1-216ENST00000484087 KBTBD13C9JR72 458 aa7.88□□□□□ -1.15
BRCA1-216ENST00000484087 ZBTB5O15062 677 aa7.88□□□□□ -1.15
BRCA1-216ENST00000484087 CTAGE5O15320 804 aa7.88□□□□□ -1.15
BRCA1-216ENST00000484087 MMP1P03956 469 aa7.88□□□□□ -1.15
BRCA1-216ENST00000484087 NUDT7P0C024 238 aa7.88□□□□□ -1.15
BRCA1-216ENST00000484087 XRCC6P12956 609 aaKnown RBP eCLIP7.88□□□□□ -1.15
BRCA1-216ENST00000484087 TMTC3Q6ZXV5 915 aa7.88□□□□□ -1.15
BRCA1-216ENST00000484087 SH3RF1Q7Z6J0 888 aa7.88□□□□□ -1.15
BRCA1-216ENST00000484087 GPIHBP1Q8IV16 184 aa7.88□□□□□ -1.15
BRCA1-216ENST00000484087 KRI1Q8N9T8 703 aaKnown RBP7.88□□□□□ -1.15
BRCA1-216ENST00000484087 SYTL5Q8TDW5 730 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-216ENST00000484087 GPKOWQ92917 476 aaPredicted RBP eCLIP7.88□□□□□ -1.15
BRCA1-216ENST00000484087 MTMR8Q96EF0 704 aa7.88□□□□□ -1.15
BRCA1-216ENST00000484087 LZTS2Q9BRK4 669 aa7.88□□□□□ -1.15
BRCA1-216ENST00000484087 TNMDQ9H2S6 317 aa7.88□□□□□ -1.15
BRCA1-216ENST00000484087 FOXP1Q9H334 677 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-216ENST00000484087 RIOX1Q9H6W3 641 aa7.88□□□□□ -1.15
BRCA1-216ENST00000484087 FAM184BQ9ULE4 1060 aa7.88□□□□□ -1.15
BRCA1-216ENST00000484087 CEP131Q9UPN4 1083 aa7.88□□□□□ -1.15
BRCA1-216ENST00000484087 EYSQ5T1H1 3165 aa7.88□□□□□ -1.15
BRCA1-216ENST00000484087 CNTNAP5Q8WYK1 1306 aa7.88□□□□□ -1.15
BRCA1-216ENST00000484087 C2orf72A6NCS6 295 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 ADAMTS3O15072 1205 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 SPTLC2O15270 562 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 MSCO60682 206 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 SLC34A2O95436 690 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 CCDC192P0DO97 292 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 U2AF2P26368 475 aaKnown RBP eCLIP7.87□□□□□ -1.15
BRCA1-216ENST00000484087 KRT2P35908 639 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 RTP1P59025 263 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 PSMC6P62333 389 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 MDM2Q00987 491 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-216ENST00000484087 TNFAIP2Q03169 654 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 KCNA10Q16322 511 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 RILPL1Q5EBL4 403 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 ADALQ6DHV7 355 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 TLK2Q86UE8 772 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 FCHSD1Q86WN1 690 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 GAS2L3Q86XJ1 694 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 NOSTRINQ8IVI9 506 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 DIS3L2Q8IYB7 885 aaKnown RBP7.87□□□□□ -1.15
BRCA1-216ENST00000484087 MRPS27Q92552 414 aaKnown RBP7.87□□□□□ -1.15
BRCA1-216ENST00000484087 AIFM3Q96NN9 605 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 AMNQ9BXJ7 453 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 ABHD16BQ9H3Z7 469 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 PRDM5Q9NQX1 630 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-216ENST00000484087 NOL7Q9UMY1 257 aaKnown RBP7.87□□□□□ -1.15
BRCA1-216ENST00000484087 PCDHA1Q9Y5I3 950 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 V9GY48 417 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-216ENST00000484087 A0A1W2PQ27 194 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 A0A1W2PQ64 194 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 A0A1W2PQD8 194 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 ASB14A6NK59 587 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 DYNC1LI2O43237 492 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-216ENST00000484087 PQBP1O60828 265 aaKnown RBP7.87□□□□□ -1.15
BRCA1-216ENST00000484087 KINO60870 393 aaKnown RBP7.87□□□□□ -1.15
BRCA1-216ENST00000484087 PPP6R2O75170 966 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 ASGR1P07306 291 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 ITGB8P26012 769 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 ACLYP53396 1101 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 PDE4DQ08499 809 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 UBE2SQ16763 222 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 CCSAPQ6IQ19 270 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-216ENST00000484087 TYW1BQ6NUM6 668 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 USP17L6PQ6QN14 398 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 CXCL17Q6UXB2 119 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 SLC39A5Q6ZMH5 540 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 SEPT14Q6ZU15 432 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 FAM177A1Q8N128 213 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-216ENST00000484087 LINC00301Q8NCQ3 95 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 PGBD1Q96JS3 809 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 BCAS3Q9H6U6 928 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 GJB4Q9NTQ9 266 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 DACT1Q9NYF0 836 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 GNEQ9Y223 722 aaKnown RBP7.87□□□□□ -1.15
BRCA1-216ENST00000484087 TELO2Q9Y4R8 837 aa7.87□□□□□ -1.15
BRCA1-216ENST00000484087 SCN5AQ14524 2016 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 BTBD18B2RXH4 712 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 KIF28PB7ZC32 967 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 DUSP11O75319 330 aaKnown RBP7.86□□□□□ -1.15
BRCA1-216ENST00000484087 BMP15O95972 392 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 MYCLP12524 364 aaPredicted RBP7.86□□□□□ -1.15
BRCA1-216ENST00000484087 SCG2P13521 617 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 LIG1P18858 919 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 EDNRBP24530 442 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 MAGEA10P43363 369 aaPredicted RBP7.86□□□□□ -1.15
BRCA1-216ENST00000484087 HSD17B4P51659 736 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 NLRP5P59047 1200 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 CHMP4BP1P59074 171 aa7.86□□□□□ -1.15
BRCA1-216ENST00000484087 FAM160A1Q05DH4 1040 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms