RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 STRNO43815 780 aa11.04□□□□□ -0.64
COL12A1-207ENST00000483888 USP14P54578 494 aa11.04□□□□□ -0.64
COL12A1-207ENST00000483888 MESDQ14696 234 aa11.04□□□□□ -0.64
COL12A1-207ENST00000483888 LRRC14Q15048 493 aa11.04□□□□□ -0.64
COL12A1-207ENST00000483888 KRT40Q6A162 431 aa11.04□□□□□ -0.64
COL12A1-207ENST00000483888 LDHAL6AQ6ZMR3 332 aa11.04□□□□□ -0.64
COL12A1-207ENST00000483888 XPO1O14980 1071 aaKnown RBP11.04□□□□□ -0.64
COL12A1-207ENST00000483888 CYP7A1P22680 504 aa11.04□□□□□ -0.64
COL12A1-207ENST00000483888 ELMSAN1Q6PJG2 1045 aa11.04□□□□□ -0.64
COL12A1-207ENST00000483888 MAML3Q96JK9 1138 aa11.04□□□□□ -0.64
COL12A1-207ENST00000483888 ADARP55265 1226 aaKnown RBP11.03□□□□□ -0.64
COL12A1-207ENST00000483888 SPATA21Q7Z572 469 aa11.03□□□□□ -0.64
COL12A1-207ENST00000483888 KCNF1Q9H3M0 494 aa11.03□□□□□ -0.64
COL12A1-207ENST00000483888 GRM8O00222 908 aa11.03□□□□□ -0.64
COL12A1-207ENST00000483888 SERPINB2P05120 415 aa11.03□□□□□ -0.64
COL12A1-207ENST00000483888 ZCCHC18P0CG32 403 aa11.03□□□□□ -0.64
COL12A1-207ENST00000483888 ADCK5Q3MIX3 580 aa11.03□□□□□ -0.64
COL12A1-207ENST00000483888 TRIM33Q9UPN9 1127 aa11.03□□□□□ -0.64
COL12A1-207ENST00000483888 NSD2O96028 1365 aa11.03□□□□□ -0.64
COL12A1-207ENST00000483888 E2F6O75461 281 aa11.03□□□□□ -0.64
COL12A1-207ENST00000483888 TRIM25Q14258 630 aaKnown RBP11.03□□□□□ -0.64
COL12A1-207ENST00000483888 C8orf58Q8NAV2 365 aa11.03□□□□□ -0.64
COL12A1-207ENST00000483888 ADA2Q9NZK5 511 aa11.03□□□□□ -0.64
COL12A1-207ENST00000483888 USP15Q9Y4E8 981 aaPredicted RBP11.03□□□□□ -0.64
COL12A1-207ENST00000483888 IQANK1A0A1B0GTG1 560 aa11.03□□□□□ -0.64
COL12A1-207ENST00000483888 PRR23D1E9PI22 279 aaPredicted RBP11.03□□□□□ -0.64
COL12A1-207ENST00000483888 CAPN9O14815 690 aa11.03□□□□□ -0.64
COL12A1-207ENST00000483888 PRR23D2P0DMB1 279 aaPredicted RBP11.03□□□□□ -0.64
COL12A1-207ENST00000483888 WASHC5Q12768 1159 aa11.03□□□□□ -0.64
COL12A1-207ENST00000483888 SFR1Q86XK3 245 aa11.03□□□□□ -0.64
COL12A1-207ENST00000483888 RUBCNQ92622 972 aa11.03□□□□□ -0.64
COL12A1-207ENST00000483888 PCP4L1A6NKN8 68 aa11.03□□□□□ -0.64
COL12A1-207ENST00000483888 B4E1Z4 1266 aa11.03□□□□□ -0.64
COL12A1-207ENST00000483888 LZTS3O60299 673 aaPredicted RBP11.03□□□□□ -0.64
COL12A1-207ENST00000483888 KLC2Q9H0B6 622 aa11.03□□□□□ -0.64
COL12A1-207ENST00000483888 H0YC42 278 aa11.03□□□□□ -0.64
COL12A1-207ENST00000483888 TSC22D2O75157 780 aa11.03□□□□□ -0.64
COL12A1-207ENST00000483888 UQCRFS1P1P0C7P4 283 aa11.03□□□□□ -0.64
COL12A1-207ENST00000483888 CLIC6Q96NY7 704 aa11.03□□□□□ -0.64
COL12A1-207ENST00000483888 BTBD7Q9P203 1132 aa11.03□□□□□ -0.64
COL12A1-207ENST00000483888 ZMYND8Q9ULU4 1186 aaPredicted RBP11.03□□□□□ -0.64
COL12A1-207ENST00000483888 NSFP46459 744 aaKnown RBP11.03□□□□□ -0.64
COL12A1-207ENST00000483888 EXOC8Q8IYI6 725 aa11.03□□□□□ -0.64
COL12A1-207ENST00000483888 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.03□□□□□ -0.64
COL12A1-207ENST00000483888 CUEDC2Q9H467 287 aa11.03□□□□□ -0.64
COL12A1-207ENST00000483888 RAD21L1Q9H4I0 556 aa11.03□□□□□ -0.64
COL12A1-207ENST00000483888 PARVGQ9HBI0 331 aa11.03□□□□□ -0.64
COL12A1-207ENST00000483888 SIX6OS1Q8N1H7 587 aa11.03□□□□□ -0.64
COL12A1-207ENST00000483888 TMEM87BQ96K49 555 aa11.03□□□□□ -0.64
COL12A1-207ENST00000483888 KCNJ14Q9UNX9 436 aa11.03□□□□□ -0.64
COL12A1-207ENST00000483888 PHF20L1A8MW92 1017 aa11.02□□□□□ -0.64
COL12A1-207ENST00000483888 ATP5J2-PTCD1G3V325 749 aa11.02□□□□□ -0.64
COL12A1-207ENST00000483888 PTCD1O75127 700 aaKnown RBP11.02□□□□□ -0.64
COL12A1-207ENST00000483888 RABGAP1LQ5R372 815 aa11.02□□□□□ -0.64
COL12A1-207ENST00000483888 RCSD1Q6JBY9 416 aa11.02□□□□□ -0.64
COL12A1-207ENST00000483888 KIF17Q9P2E2 1029 aa11.02□□□□□ -0.64
COL12A1-207ENST00000483888 ZNF839A8K0R7 811 aa11.02□□□□□ -0.64
COL12A1-207ENST00000483888 TXKP42681 527 aa11.02□□□□□ -0.64
COL12A1-207ENST00000483888 MKRN3Q13064 507 aaKnown RBP11.02□□□□□ -0.64
COL12A1-207ENST00000483888 IQCB1Q15051 598 aa11.02□□□□□ -0.64
COL12A1-207ENST00000483888 BEGAINQ9BUH8 593 aa11.02□□□□□ -0.64
COL12A1-207ENST00000483888 TAF1DQ9H5J8 278 aaPredicted RBP11.02□□□□□ -0.64
COL12A1-207ENST00000483888 SUCLA2Q9P2R7 463 aaPredicted RBP11.02□□□□□ -0.64
COL12A1-207ENST00000483888 DNALI1O14645 258 aaPredicted RBP11.02□□□□□ -0.65
COL12A1-207ENST00000483888 N4BP1O75113 896 aaKnown RBP11.02□□□□□ -0.65
COL12A1-207ENST00000483888 SLC12A1Q13621 1099 aa11.02□□□□□ -0.65
COL12A1-207ENST00000483888 KCNB1Q14721 858 aa11.02□□□□□ -0.65
COL12A1-207ENST00000483888 C10orf76Q5T2E6 689 aa11.02□□□□□ -0.65
COL12A1-207ENST00000483888 CABP7Q86V35 215 aa11.02□□□□□ -0.65
COL12A1-207ENST00000483888 AFPP02771 609 aaKnown RBP11.02□□□□□ -0.65
COL12A1-207ENST00000483888 PMS2P54278 862 aa11.02□□□□□ -0.65
COL12A1-207ENST00000483888 CALCRLQ16602 461 aa11.02□□□□□ -0.65
COL12A1-207ENST00000483888 KDRP35968 1356 aa11.02□□□□□ -0.65
COL12A1-207ENST00000483888 E7ENQ6 273 aa11.02□□□□□ -0.65
COL12A1-207ENST00000483888 STARD3NLO95772 234 aa11.02□□□□□ -0.65
COL12A1-207ENST00000483888 MAGEB6Q8N7X4 407 aa11.02□□□□□ -0.65
COL12A1-207ENST00000483888 NDUFA13Q9P0J0 144 aa11.02□□□□□ -0.65
COL12A1-207ENST00000483888 TCHHQ07283 1943 aa11.02□□□□□ -0.65
COL12A1-207ENST00000483888 TNNC2P02585 160 aa11.02□□□□□ -0.65
COL12A1-207ENST00000483888 EEF2KMTQ96G04 330 aa11.02□□□□□ -0.65
COL12A1-207ENST00000483888 CHPF2Q9P2E5 772 aa11.02□□□□□ -0.65
COL12A1-207ENST00000483888 NFIBO00712 420 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 CPP00450 1065 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 SCTRP47872 440 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 ARFIP2P53365 341 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 ATP1A4Q13733 1029 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 GIPC2Q8TF65 315 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 TM6SF1Q9BZW5 370 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 FAM107AO95990 144 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 NR1H3Q13133 447 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 RCN1Q15293 331 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 TRIP13Q15645 432 aaPredicted RBP11.01□□□□□ -0.65
COL12A1-207ENST00000483888 HAUS3Q68CZ6 603 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 ZC3H15Q8WU90 426 aaKnown RBP11.01□□□□□ -0.65
COL12A1-207ENST00000483888 CYGBQ8WWM9 190 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 OCRLQ01968 901 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 KIF19Q2TAC6 998 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 PROSER2Q86WR7 435 aaPredicted RBP11.01□□□□□ -0.65
COL12A1-207ENST00000483888 RPAP3Q9H6T3 665 aaPredicted RBP11.01□□□□□ -0.65
COL12A1-207ENST00000483888 MAN1B1Q9UKM7 699 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms