RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 TOX2Q96NM4 488 aa15.27■□□□□ 0.04
SSR1-208ENST00000483409 SENP7Q9BQF6 1050 aa15.27■□□□□ 0.04
SSR1-208ENST00000483409 KCNH7Q9NS40 1196 aa15.27■□□□□ 0.04
SSR1-208ENST00000483409 TELO2Q9Y4R8 837 aa15.27■□□□□ 0.04
SSR1-208ENST00000483409 WDR81Q562E7 1941 aa15.26■□□□□ 0.03
SSR1-208ENST00000483409 TRIM43BA6NCK2 446 aa15.26■□□□□ 0.03
SSR1-208ENST00000483409 FAM86B1E9PN63 330 aa15.26■□□□□ 0.03
SSR1-208ENST00000483409 FAM86B2P0C5J1 330 aa15.26■□□□□ 0.03
SSR1-208ENST00000483409 ARP10275 920 aa15.26■□□□□ 0.03
SSR1-208ENST00000483409 HOXD8P13378 290 aaPredicted RBP15.26■□□□□ 0.03
SSR1-208ENST00000483409 XBP1P17861 261 aa15.26■□□□□ 0.03
SSR1-208ENST00000483409 MAGEA10P43363 369 aaPredicted RBP15.26■□□□□ 0.03
SSR1-208ENST00000483409 GALNT17Q6IS24 598 aa15.26■□□□□ 0.03
SSR1-208ENST00000483409 FAM177A1Q8N128 213 aaPredicted RBP15.26■□□□□ 0.03
SSR1-208ENST00000483409 GIMAP8Q8ND71 665 aaPredicted RBP15.26■□□□□ 0.03
SSR1-208ENST00000483409 KAT2BQ92831 832 aa15.26■□□□□ 0.03
SSR1-208ENST00000483409 TRIM43Q96BQ3 446 aaPredicted RBP15.26■□□□□ 0.03
SSR1-208ENST00000483409 UIMC1Q96RL1 719 aa15.26■□□□□ 0.03
SSR1-208ENST00000483409 PHF20Q9BVI0 1012 aa15.26■□□□□ 0.03
SSR1-208ENST00000483409 SH2B1Q9NRF2 756 aaPredicted RBP15.26■□□□□ 0.03
SSR1-208ENST00000483409 TMEM39AQ9NV64 488 aa15.26■□□□□ 0.03
SSR1-208ENST00000483409 M0R2N6 131 aa15.25■□□□□ 0.03
SSR1-208ENST00000483409 MEIS1O00470 390 aa15.25■□□□□ 0.03
SSR1-208ENST00000483409 TLR3O15455 904 aaKnown RBP15.25■□□□□ 0.03
SSR1-208ENST00000483409 B4GALT4O60513 344 aa15.25■□□□□ 0.03
SSR1-208ENST00000483409 PPFIA4O75335 1185 aa15.25■□□□□ 0.03
SSR1-208ENST00000483409 CD2BP2O95400 341 aaKnown RBP15.25■□□□□ 0.03
SSR1-208ENST00000483409 CYP3A4P08684 503 aa15.25■□□□□ 0.03
SSR1-208ENST00000483409 PSEN2P49810 448 aa15.25■□□□□ 0.03
SSR1-208ENST00000483409 PLA2G4DQ86XP0 818 aa15.25■□□□□ 0.03
SSR1-208ENST00000483409 GPR20Q99678 358 aa15.25■□□□□ 0.03
SSR1-208ENST00000483409 LBHD1Q9BQE6 289 aaPredicted RBP15.25■□□□□ 0.03
SSR1-208ENST00000483409 TRPV6Q9H1D0 765 aa15.25■□□□□ 0.03
SSR1-208ENST00000483409 AGO4Q9HCK5 861 aaKnown RBP15.25■□□□□ 0.03
SSR1-208ENST00000483409 COLQQ9Y215 455 aaPredicted RBP15.25■□□□□ 0.03
SSR1-208ENST00000483409 MYH9P35579 1960 aaKnown RBP15.24■□□□□ 0.03
SSR1-208ENST00000483409 KIAA0355O15063 1070 aa15.24■□□□□ 0.03
SSR1-208ENST00000483409 MAFGO15525 162 aa15.24■□□□□ 0.03
SSR1-208ENST00000483409 F2P00734 622 aa15.24■□□□□ 0.03
SSR1-208ENST00000483409 CD4P01730 458 aa15.24■□□□□ 0.03
SSR1-208ENST00000483409 LGALS2P05162 132 aa15.24■□□□□ 0.03
SSR1-208ENST00000483409 ITGB8P26012 769 aa15.24■□□□□ 0.03
SSR1-208ENST00000483409 MFSD10Q14728 455 aa15.24■□□□□ 0.03
SSR1-208ENST00000483409 KIAA0753Q2KHM9 967 aa15.24■□□□□ 0.03
SSR1-208ENST00000483409 UTP14CQ5TAP6 766 aaKnown RBP15.24■□□□□ 0.03
SSR1-208ENST00000483409 NFRKBQ6P4R8 1299 aa15.24■□□□□ 0.03
SSR1-208ENST00000483409 NIPA1Q7RTP0 329 aa15.24■□□□□ 0.03
SSR1-208ENST00000483409 OXER1Q8TDS5 423 aa15.24■□□□□ 0.03
SSR1-208ENST00000483409 TBCKQ8TEA7 893 aa15.24■□□□□ 0.03
SSR1-208ENST00000483409 SDF4Q9BRK5 362 aa15.24■□□□□ 0.03
SSR1-208ENST00000483409 LLPHQ9BRT6 129 aaKnown RBP15.24■□□□□ 0.03
SSR1-208ENST00000483409 SEZ6LQ9BYH1 1024 aa15.24■□□□□ 0.03
SSR1-208ENST00000483409 JPH1Q9HDC5 661 aaPredicted RBP15.24■□□□□ 0.03
SSR1-208ENST00000483409 TRMT13Q9NUP7 481 aaKnown RBP15.24■□□□□ 0.03
SSR1-208ENST00000483409 TBX21Q9UL17 535 aa15.24■□□□□ 0.03
SSR1-208ENST00000483409 IGLV3-22A0A075B6J6 115 aa15.23■□□□□ 0.03
SSR1-208ENST00000483409 DDX39AO00148 427 aaKnown RBP15.23■□□□□ 0.03
SSR1-208ENST00000483409 EDIL3O43854 480 aa15.23■□□□□ 0.03
SSR1-208ENST00000483409 RAG1P15918 1043 aa15.23■□□□□ 0.03
SSR1-208ENST00000483409 SETQ01105 290 aaPredicted RBP15.23■□□□□ 0.03
SSR1-208ENST00000483409 ITGB3BPQ13352 177 aaPredicted RBP15.23■□□□□ 0.03
SSR1-208ENST00000483409 NONOQ15233 471 aaKnown RBP eCLIP15.23■□□□□ 0.03
SSR1-208ENST00000483409 PRR16Q569H4 304 aa15.23■□□□□ 0.03
SSR1-208ENST00000483409 KRT25Q7Z3Z0 450 aa15.23■□□□□ 0.03
SSR1-208ENST00000483409 TRIM50Q86XT4 487 aa15.23■□□□□ 0.03
SSR1-208ENST00000483409 BADQ92934 168 aa15.23■□□□□ 0.03
SSR1-208ENST00000483409 GDF15Q99988 308 aa15.23■□□□□ 0.03
SSR1-208ENST00000483409 C16orf70Q9BSU1 422 aa15.23■□□□□ 0.03
SSR1-208ENST00000483409 KATNAL1Q9BW62 490 aa15.23■□□□□ 0.03
SSR1-208ENST00000483409 PPP1R12CQ9BZL4 782 aa15.23■□□□□ 0.03
SSR1-208ENST00000483409 TRIOBPQ9H2D6 2365 aa15.22■□□□□ 0.03
SSR1-208ENST00000483409 NFASCO94856 1347 aa15.22■□□□□ 0.03
SSR1-208ENST00000483409 CCDC194A0A1B0GVG4 234 aa15.22■□□□□ 0.03
SSR1-208ENST00000483409 H3BRB1 525 aa15.22■□□□□ 0.03
SSR1-208ENST00000483409 HAS3O00219 553 aa15.22■□□□□ 0.03
SSR1-208ENST00000483409 CIITAP33076 1130 aa15.22■□□□□ 0.03
SSR1-208ENST00000483409 KRT2P35908 639 aa15.22■□□□□ 0.03
SSR1-208ENST00000483409 TCF7P36402 384 aaPredicted RBP15.22■□□□□ 0.03
SSR1-208ENST00000483409 GUCY1B3Q02153 619 aa15.22■□□□□ 0.03
SSR1-208ENST00000483409 TRIM29Q14134 588 aa15.22■□□□□ 0.03
SSR1-208ENST00000483409 INF2Q27J81 1249 aa15.22■□□□□ 0.03
SSR1-208ENST00000483409 C7orf31Q8N865 590 aa15.22■□□□□ 0.03
SSR1-208ENST00000483409 ZNF577Q9BSK1 485 aa15.22■□□□□ 0.03
SSR1-208ENST00000483409 TUT1Q9H6E5 874 aaKnown RBP15.22■□□□□ 0.03
SSR1-208ENST00000483409 HDAC6Q9UBN7 1215 aa15.22■□□□□ 0.03
SSR1-208ENST00000483409 SLC9A2Q9UBY0 812 aa15.22■□□□□ 0.03
SSR1-208ENST00000483409 TANC1Q9C0D5 1861 aa15.22■□□□□ 0.03
SSR1-208ENST00000483409 SCN5AQ14524 2016 aa15.22■□□□□ 0.03
SSR1-208ENST00000483409 RANBP2P49792 3224 aaKnown RBP15.21■□□□□ 0.03
SSR1-208ENST00000483409 GSTTP1A0A1W2PQM5 241 aa15.21■□□□□ 0.03
SSR1-208ENST00000483409 IPO5O00410 1097 aaKnown RBP15.21■□□□□ 0.03
SSR1-208ENST00000483409 TDP2O95551 362 aa15.21■□□□□ 0.03
SSR1-208ENST00000483409 CYP2C9P11712 490 aa15.21■□□□□ 0.03
SSR1-208ENST00000483409 USP11P51784 963 aa15.21■□□□□ 0.03
SSR1-208ENST00000483409 HMGN5P82970 282 aaKnown RBP15.21■□□□□ 0.03
SSR1-208ENST00000483409 PTPN11Q06124 597 aaPredicted RBP15.21■□□□□ 0.03
SSR1-208ENST00000483409 NR5A1Q13285 461 aa15.21■□□□□ 0.03
SSR1-208ENST00000483409 KRT40Q6A162 431 aa15.21■□□□□ 0.03
SSR1-208ENST00000483409 GDF6Q6KF10 455 aaPredicted RBP15.21■□□□□ 0.03
SSR1-208ENST00000483409 PIK3AP1Q6ZUJ8 805 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms