RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 TOX2Q96NM4 488 aa6.99□□□□□ -1.29
CSDE1-207ENST00000483407 PUS7LQ9H0K6 701 aaKnown RBP6.99□□□□□ -1.29
CSDE1-207ENST00000483407 NYAP2Q9P242 653 aa6.99□□□□□ -1.29
CSDE1-207ENST00000483407 FBXO40Q9UH90 709 aa6.99□□□□□ -1.29
CSDE1-207ENST00000483407 ZHX1Q9UKY1 873 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-207ENST00000483407 POLIQ9UNA4 740 aa6.99□□□□□ -1.29
CSDE1-207ENST00000483407 GPC6Q9Y625 555 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-207ENST00000483407 MROH7Q68CQ1 1323 aa6.99□□□□□ -1.29
CSDE1-207ENST00000483407 SYNRGQ9UMZ2 1314 aa6.99□□□□□ -1.29
CSDE1-207ENST00000483407 NAV1Q8NEY1 1877 aa6.98□□□□□ -1.29
CSDE1-207ENST00000483407 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-207ENST00000483407 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-207ENST00000483407 MINDY4BA8MYZ0 360 aa6.98□□□□□ -1.29
CSDE1-207ENST00000483407 SMIM22K7EJ46 135 aa6.98□□□□□ -1.29
CSDE1-207ENST00000483407 ATP2A1O14983 1001 aa6.98□□□□□ -1.29
CSDE1-207ENST00000483407 GPR182O15218 404 aa6.98□□□□□ -1.29
CSDE1-207ENST00000483407 DUSP11O75319 330 aaKnown RBP6.98□□□□□ -1.29
CSDE1-207ENST00000483407 NDUFB10O96000 172 aa6.98□□□□□ -1.29
CSDE1-207ENST00000483407 CHGBP05060 677 aa6.98□□□□□ -1.29
CSDE1-207ENST00000483407 C6orf222P0C671 652 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-207ENST00000483407 GNAT2P19087 354 aa6.98□□□□□ -1.29
CSDE1-207ENST00000483407 ITGB8P26012 769 aa6.98□□□□□ -1.29
CSDE1-207ENST00000483407 PLA2G4AP47712 749 aa6.98□□□□□ -1.29
CSDE1-207ENST00000483407 TDO2P48775 406 aa6.98□□□□□ -1.29
CSDE1-207ENST00000483407 ACLYP53396 1101 aa6.98□□□□□ -1.29
CSDE1-207ENST00000483407 EHHADHQ08426 723 aa6.98□□□□□ -1.29
CSDE1-207ENST00000483407 KCNA10Q16322 511 aa6.98□□□□□ -1.29
CSDE1-207ENST00000483407 HIF1AQ16665 826 aa6.98□□□□□ -1.29
CSDE1-207ENST00000483407 LRRFIP1Q32MZ4 808 aaKnown RBP6.98□□□□□ -1.29
CSDE1-207ENST00000483407 WDR44Q5JSH3 913 aa6.98□□□□□ -1.29
CSDE1-207ENST00000483407 MAMDC4Q6UXC1 1216 aa6.98□□□□□ -1.29
CSDE1-207ENST00000483407 TREML1Q86YW5 311 aa6.98□□□□□ -1.29
CSDE1-207ENST00000483407 ZNF444Q8N0Y2 327 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-207ENST00000483407 CPXCR1Q8N123 301 aa6.98□□□□□ -1.29
CSDE1-207ENST00000483407 STK11IPQ8N1F8 1099 aa6.98□□□□□ -1.29
CSDE1-207ENST00000483407 ANKRD35Q8N283 1001 aa6.98□□□□□ -1.29
CSDE1-207ENST00000483407 APPBP2Q92624 585 aa6.98□□□□□ -1.29
CSDE1-207ENST00000483407 LENG1Q96BZ8 264 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-207ENST00000483407 STRBPQ96SI9 672 aaKnown RBP6.98□□□□□ -1.29
CSDE1-207ENST00000483407 NUP88Q99567 741 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-207ENST00000483407 TTYH1Q9H313 450 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-207ENST00000483407 POLMQ9NP87 494 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-207ENST00000483407 ECHDC1Q9NTX5 307 aa6.98□□□□□ -1.29
CSDE1-207ENST00000483407 CLIP2Q9UDT6 1046 aa6.98□□□□□ -1.29
CSDE1-207ENST00000483407 SYNPO2Q9UMS6 1093 aa6.98□□□□□ -1.29
CSDE1-207ENST00000483407 MYO5AQ9Y4I1 1855 aaKnown RBP6.98□□□□□ -1.29
CSDE1-207ENST00000483407 ELP1O95163 1332 aa6.98□□□□□ -1.29
CSDE1-207ENST00000483407 DNAJC25-GNG10A0A024R161 153 aa6.97□□□□□ -1.29
CSDE1-207ENST00000483407 A0A0G2JMZ2 1700 aa6.97□□□□□ -1.29
CSDE1-207ENST00000483407 FAM181BA6NEQ2 426 aa6.97□□□□□ -1.29
CSDE1-207ENST00000483407 GSG1L2A8MUP6 293 aa6.97□□□□□ -1.29
CSDE1-207ENST00000483407 TLR3O15455 904 aaKnown RBP6.97□□□□□ -1.29
CSDE1-207ENST00000483407 SNAI1O95863 264 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-207ENST00000483407 TTLL1O95922 423 aa6.97□□□□□ -1.29
CSDE1-207ENST00000483407 TIMP1P01033 207 aa6.97□□□□□ -1.29
CSDE1-207ENST00000483407 PDGFAP04085 211 aa6.97□□□□□ -1.29
CSDE1-207ENST00000483407 APPP05067 770 aa6.97□□□□□ -1.29
CSDE1-207ENST00000483407 ZFYP08048 801 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-207ENST00000483407 CST5P28325 142 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-207ENST00000483407 OAZ1P54368 228 aa6.97□□□□□ -1.29
CSDE1-207ENST00000483407 EPHB4P54760 987 aa6.97□□□□□ -1.29
CSDE1-207ENST00000483407 DNM1Q05193 864 aaKnown RBP6.97□□□□□ -1.29
CSDE1-207ENST00000483407 FAAP100Q0VG06 881 aa6.97□□□□□ -1.29
CSDE1-207ENST00000483407 PPIGQ13427 754 aaKnown RBP eCLIP6.97□□□□□ -1.29
CSDE1-207ENST00000483407 ACVR2BQ13705 512 aa6.97□□□□□ -1.29
CSDE1-207ENST00000483407 KBTBD3Q8NAB2 608 aa6.97□□□□□ -1.29
CSDE1-207ENST00000483407 KLHDC9Q8NEP7 349 aa6.97□□□□□ -1.29
CSDE1-207ENST00000483407 CHST13Q8NET6 341 aa6.97□□□□□ -1.29
CSDE1-207ENST00000483407 RNF217Q8TC41 542 aa6.97□□□□□ -1.29
CSDE1-207ENST00000483407 EDEM1Q92611 657 aa6.97□□□□□ -1.29
CSDE1-207ENST00000483407 KIFC2Q96AC6 838 aa6.97□□□□□ -1.29
CSDE1-207ENST00000483407 NACAP1Q9BZK3 213 aa6.97□□□□□ -1.29
CSDE1-207ENST00000483407 ABHD16BQ9H3Z7 469 aa6.97□□□□□ -1.29
CSDE1-207ENST00000483407 RAVER2Q9HCJ3 691 aaKnown RBP6.97□□□□□ -1.29
CSDE1-207ENST00000483407 FEM1BQ9UK73 627 aa6.97□□□□□ -1.29
CSDE1-207ENST00000483407 ISY1Q9ULR0 285 aaKnown RBP6.97□□□□□ -1.29
CSDE1-207ENST00000483407 RIPK3Q9Y572 518 aa6.97□□□□□ -1.29
CSDE1-207ENST00000483407 DNAH12Q6ZR08 3092 aa6.96□□□□□ -1.29
CSDE1-207ENST00000483407 A0A0U1RQG5 324 aaPredicted RBP6.96□□□□□ -1.3
CSDE1-207ENST00000483407 TGFBR3LH3BV60 316 aa6.96□□□□□ -1.3
CSDE1-207ENST00000483407 ARVCFO00192 962 aa6.96□□□□□ -1.3
CSDE1-207ENST00000483407 RNF113AO15541 343 aaKnown RBP6.96□□□□□ -1.3
CSDE1-207ENST00000483407 GPAA1O43292 621 aa6.96□□□□□ -1.3
CSDE1-207ENST00000483407 SMARCA5O60264 1052 aaPredicted RBP6.96□□□□□ -1.3
CSDE1-207ENST00000483407 ASGR1P07306 291 aa6.96□□□□□ -1.3
CSDE1-207ENST00000483407 SLC3A2P08195 630 aaKnown RBP6.96□□□□□ -1.3
CSDE1-207ENST00000483407 TSPY3P0CV98 308 aa6.96□□□□□ -1.3
CSDE1-207ENST00000483407 TSPY8P0CW00 308 aa6.96□□□□□ -1.3
CSDE1-207ENST00000483407 FGD1P98174 961 aa6.96□□□□□ -1.3
CSDE1-207ENST00000483407 PDE4BQ07343 736 aa6.96□□□□□ -1.3
CSDE1-207ENST00000483407 IKQ13123 557 aaPredicted RBP6.96□□□□□ -1.3
CSDE1-207ENST00000483407 CCDC144BQ3MJ40 725 aa6.96□□□□□ -1.3
CSDE1-207ENST00000483407 IER5Q5VY09 327 aa6.96□□□□□ -1.3
CSDE1-207ENST00000483407 SLFN13Q68D06 897 aa6.96□□□□□ -1.3
CSDE1-207ENST00000483407 CCSAPQ6IQ19 270 aaPredicted RBP6.96□□□□□ -1.3
CSDE1-207ENST00000483407 MFSD5Q6N075 450 aa6.96□□□□□ -1.3
CSDE1-207ENST00000483407 CCDC129Q6ZRS4 1044 aa6.96□□□□□ -1.3
CSDE1-207ENST00000483407 NOL8Q76FK4 1167 aaKnown RBP6.96□□□□□ -1.3
CSDE1-207ENST00000483407 ARMCX2Q7L311 632 aa6.96□□□□□ -1.3
CSDE1-207ENST00000483407 TMEM199Q8N511 208 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms