RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 KCNJ2P63252 427 aa12.96□□□□□ -0.33
VTI1A-205ENST00000483122 PDE4DQ08499 809 aa12.96□□□□□ -0.33
VTI1A-205ENST00000483122 TDRD12Q587J7 1177 aaKnown RBP12.96□□□□□ -0.33
VTI1A-205ENST00000483122 CCDC178Q5BJE1 867 aa12.96□□□□□ -0.33
VTI1A-205ENST00000483122 THEMIS2Q5TEJ8 643 aa12.96□□□□□ -0.33
VTI1A-205ENST00000483122 PDXDC1Q6P996 788 aa12.96□□□□□ -0.33
VTI1A-205ENST00000483122 SYNE4Q8N205 404 aa12.96□□□□□ -0.33
VTI1A-205ENST00000483122 CCDC26Q8TAB7 109 aa12.96□□□□□ -0.33
VTI1A-205ENST00000483122 PRCCQ92733 491 aaPredicted RBP12.96□□□□□ -0.33
VTI1A-205ENST00000483122 ZNF512BQ96KM6 892 aaPredicted RBP12.96□□□□□ -0.33
VTI1A-205ENST00000483122 FAM129AQ9BZQ8 928 aa12.96□□□□□ -0.33
VTI1A-205ENST00000483122 KCNMB3Q9NPA1 279 aa12.96□□□□□ -0.33
VTI1A-205ENST00000483122 RGS17Q9UGC6 210 aaPredicted RBP12.96□□□□□ -0.33
VTI1A-205ENST00000483122 RTL9Q8NET4 1388 aa12.96□□□□□ -0.33
VTI1A-205ENST00000483122 BICDL2A1A5D9 508 aa12.96□□□□□ -0.34
VTI1A-205ENST00000483122 GSTA1P08263 222 aa12.96□□□□□ -0.34
VTI1A-205ENST00000483122 NLRP5P59047 1200 aa12.96□□□□□ -0.34
VTI1A-205ENST00000483122 CUL1Q13616 776 aa12.96□□□□□ -0.34
VTI1A-205ENST00000483122 LDHAL6AQ6ZMR3 332 aa12.96□□□□□ -0.34
VTI1A-205ENST00000483122 IFNL2Q8IZJ0 200 aa12.96□□□□□ -0.34
VTI1A-205ENST00000483122 SPICE1Q8N0Z3 855 aa12.96□□□□□ -0.34
VTI1A-205ENST00000483122 ZNF317Q96PQ6 595 aaPredicted RBP12.96□□□□□ -0.34
VTI1A-205ENST00000483122 PSMD1Q99460 953 aa12.96□□□□□ -0.34
VTI1A-205ENST00000483122 KBTBD4Q9NVX7 518 aa12.96□□□□□ -0.34
VTI1A-205ENST00000483122 SLC5A4Q9NY91 659 aa12.96□□□□□ -0.34
VTI1A-205ENST00000483122 PNMA2Q9UL42 364 aa12.96□□□□□ -0.34
VTI1A-205ENST00000483122 TNS2Q63HR2 1409 aa12.95□□□□□ -0.34
VTI1A-205ENST00000483122 EIF4E1BA6NMX2 242 aaKnown RBP12.95□□□□□ -0.34
VTI1A-205ENST00000483122 FAM98CQ17RN3 349 aaKnown RBP12.95□□□□□ -0.34
VTI1A-205ENST00000483122 STAG2Q8N3U4 1231 aa12.95□□□□□ -0.34
VTI1A-205ENST00000483122 ENAHQ8N8S7 591 aaPredicted RBP12.95□□□□□ -0.34
VTI1A-205ENST00000483122 CCHCR1Q8TD31 782 aa12.95□□□□□ -0.34
VTI1A-205ENST00000483122 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.95□□□□□ -0.34
VTI1A-205ENST00000483122 SEMA6BQ9H3T3 888 aa12.95□□□□□ -0.34
VTI1A-205ENST00000483122 A8MUI8 341 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 BHMG1C9JSJ3 638 aaPredicted RBP12.94□□□□□ -0.34
VTI1A-205ENST00000483122 ONECUT3O60422 494 aaPredicted RBP12.94□□□□□ -0.34
VTI1A-205ENST00000483122 SNUPNO95149 360 aaKnown RBP12.94□□□□□ -0.34
VTI1A-205ENST00000483122 LINGO3P0C6S8 592 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 CABP4P57796 275 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 SNX1Q13596 522 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 ZNF268Q14587 947 aaPredicted RBP12.94□□□□□ -0.34
VTI1A-205ENST00000483122 NAB2Q15742 525 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 PTPROQ16827 1216 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 ARL6IP4Q66PJ3 421 aaKnown RBP12.94□□□□□ -0.34
VTI1A-205ENST00000483122 LRRC34Q8IZ02 419 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 TLCD1Q96CP7 247 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 IQCDQ96DY2 449 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 AP1M1Q9BXS5 423 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 PACSIN1Q9BY11 444 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 MTFR1LQ9H019 292 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 ABCF3Q9NUQ8 709 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 SWAP70Q9UH65 585 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 CORO1CQ9ULV4 474 aaPredicted RBP12.94□□□□□ -0.34
VTI1A-205ENST00000483122 CNTNAP5Q8WYK1 1306 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 MINDY4BA8MYZ0 360 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 KCNK3O14649 394 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 CYP27B1O15528 508 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 SART1O43290 800 aaKnown RBP12.94□□□□□ -0.34
VTI1A-205ENST00000483122 DAPK3O43293 454 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 UPP2O95045 317 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 ALADP13716 330 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 NQO1P15559 274 aaKnown RBP12.94□□□□□ -0.34
VTI1A-205ENST00000483122 CHN1P15882 459 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 ARID4AP29374 1257 aaPredicted RBP12.94□□□□□ -0.34
VTI1A-205ENST00000483122 TRAPPC10P48553 1259 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 ALDH5A1P51649 535 aaPredicted RBP12.94□□□□□ -0.34
VTI1A-205ENST00000483122 PIGWQ7Z7B1 504 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 ANKS4BQ8N8V4 417 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 MIGA1Q8NAN2 632 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 MTA3Q9BTC8 594 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 TMEM60Q9H2L4 133 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 GOLPH3Q9H4A6 298 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 NLRC4Q9NPP4 1024 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 CNNM1Q9NRU3 951 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 HOMER3Q9NSC5 361 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 GGT7Q9UJ14 662 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 FAM205AQ6ZU69 1335 aa12.94□□□□□ -0.34
VTI1A-205ENST00000483122 SSU72P8A0A1W2PR75 194 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 CFAP73A6NFT4 308 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 F8VZ95 297 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 CAND2O75155 1236 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 CSF1RP07333 972 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 ABL2P42684 1182 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 CACNA2D4Q7Z3S7 1137 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 TMC3Q7Z5M5 1100 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 ERICH1Q86X53 443 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 SRBD1Q8N5C6 995 aaKnown RBP12.93□□□□□ -0.34
VTI1A-205ENST00000483122 VGLL2Q8N8G2 317 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 EIF1ADQ8N9N8 165 aaKnown RBP12.93□□□□□ -0.34
VTI1A-205ENST00000483122 RASGRP4Q8TDF6 673 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 SCFD2Q8WU76 684 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 ELAC2Q9BQ52 826 aaKnown RBP12.93□□□□□ -0.34
VTI1A-205ENST00000483122 FAM167BQ9BTA0 163 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 ISCA1Q9BUE6 129 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 DDX47Q9H0S4 455 aaKnown RBP12.93□□□□□ -0.34
VTI1A-205ENST00000483122 PCDHGC5Q9Y5F6 944 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 BCORQ6W2J9 1755 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 RBAK-RBAKDNI3L0D1 243 aa12.93□□□□□ -0.34
VTI1A-205ENST00000483122 TLR2O60603 784 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms