RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 ITGA7Q13683 1181 aa9.99□□□□□ -0.81
SNX4-205ENST00000482965 PRPF38BQ5VTL8 546 aaKnown RBP9.99□□□□□ -0.81
SNX4-205ENST00000482965 METTL7BQ6UX53 244 aa9.99□□□□□ -0.81
SNX4-205ENST00000482965 CYFIP1Q7L576 1253 aa9.99□□□□□ -0.81
SNX4-205ENST00000482965 KRT25Q7Z3Z0 450 aa9.99□□□□□ -0.81
SNX4-205ENST00000482965 PLA2G4DQ86XP0 818 aa9.99□□□□□ -0.81
SNX4-205ENST00000482965 GIMAP8Q8ND71 665 aaPredicted RBP9.99□□□□□ -0.81
SNX4-205ENST00000482965 CYP2W1Q8TAV3 490 aa9.99□□□□□ -0.81
SNX4-205ENST00000482965 SENP7Q9BQF6 1050 aa9.99□□□□□ -0.81
SNX4-205ENST00000482965 BRMS1Q9HCU9 246 aa9.99□□□□□ -0.81
SNX4-205ENST00000482965 PRDM5Q9NQX1 630 aaPredicted RBP9.99□□□□□ -0.81
SNX4-205ENST00000482965 GJB4Q9NTQ9 266 aa9.99□□□□□ -0.81
SNX4-205ENST00000482965 PRKAG2Q9UGJ0 569 aa9.99□□□□□ -0.81
SNX4-205ENST00000482965 MROH7Q68CQ1 1323 aa9.99□□□□□ -0.81
SNX4-205ENST00000482965 CCDC194A0A1B0GVG4 234 aa9.98□□□□□ -0.81
SNX4-205ENST00000482965 MEIS1O00470 390 aa9.98□□□□□ -0.81
SNX4-205ENST00000482965 TLR3O15455 904 aaKnown RBP9.98□□□□□ -0.81
SNX4-205ENST00000482965 ATP9AO75110 1047 aa9.98□□□□□ -0.81
SNX4-205ENST00000482965 CD2BP2O95400 341 aaKnown RBP9.98□□□□□ -0.81
SNX4-205ENST00000482965 ZNF286BP0CG31 522 aa9.98□□□□□ -0.81
SNX4-205ENST00000482965 ARP10275 920 aa9.98□□□□□ -0.81
SNX4-205ENST00000482965 KCNA2P16389 499 aa9.98□□□□□ -0.81
SNX4-205ENST00000482965 SYN1P17600 705 aa9.98□□□□□ -0.81
SNX4-205ENST00000482965 KRT2P35908 639 aa9.98□□□□□ -0.81
SNX4-205ENST00000482965 CDK7P50613 346 aa9.98□□□□□ -0.81
SNX4-205ENST00000482965 NONOQ15233 471 aaKnown RBP eCLIP9.98□□□□□ -0.81
SNX4-205ENST00000482965 NPY5RQ15761 445 aa9.98□□□□□ -0.81
SNX4-205ENST00000482965 HSDL1Q3SXM5 330 aa9.98□□□□□ -0.81
SNX4-205ENST00000482965 FAM47CQ5HY64 1035 aa9.98□□□□□ -0.81
SNX4-205ENST00000482965 NIPA1Q7RTP0 329 aa9.98□□□□□ -0.81
SNX4-205ENST00000482965 FAM184AQ8NB25 1140 aa9.98□□□□□ -0.81
SNX4-205ENST00000482965 TBCKQ8TEA7 893 aa9.98□□□□□ -0.81
SNX4-205ENST00000482965 CRYGNQ8WXF5 182 aa9.98□□□□□ -0.81
SNX4-205ENST00000482965 TMX3Q96JJ7 454 aa9.98□□□□□ -0.81
SNX4-205ENST00000482965 SDF4Q9BRK5 362 aa9.98□□□□□ -0.81
SNX4-205ENST00000482965 SEZ6LQ9BYH1 1024 aa9.98□□□□□ -0.81
SNX4-205ENST00000482965 BCAS3Q9H6U6 928 aa9.98□□□□□ -0.81
SNX4-205ENST00000482965 KCNH7Q9NS40 1196 aa9.98□□□□□ -0.81
SNX4-205ENST00000482965 TRIP12Q14669 1992 aaPredicted RBP9.97□□□□□ -0.81
SNX4-205ENST00000482965 MKI67P46013 3256 aaKnown RBP9.97□□□□□ -0.81
SNX4-205ENST00000482965 FAM86B1E9PN63 330 aa9.97□□□□□ -0.81
SNX4-205ENST00000482965 M0R2N6 131 aa9.97□□□□□ -0.81
SNX4-205ENST00000482965 PPFIA4O75335 1185 aa9.97□□□□□ -0.81
SNX4-205ENST00000482965 CLTBP09497 229 aa9.97□□□□□ -0.81
SNX4-205ENST00000482965 FAM86B2P0C5J1 330 aa9.97□□□□□ -0.81
SNX4-205ENST00000482965 HOXD8P13378 290 aaPredicted RBP9.97□□□□□ -0.81
SNX4-205ENST00000482965 PSEN2P49810 448 aa9.97□□□□□ -0.81
SNX4-205ENST00000482965 USP11P51784 963 aa9.97□□□□□ -0.81
SNX4-205ENST00000482965 SETQ01105 290 aaPredicted RBP9.97□□□□□ -0.81
SNX4-205ENST00000482965 NBPF20Q3BBV1 942 aa9.97□□□□□ -0.81
SNX4-205ENST00000482965 PRR16Q569H4 304 aa9.97□□□□□ -0.81
SNX4-205ENST00000482965 KRT40Q6A162 431 aa9.97□□□□□ -0.81
SNX4-205ENST00000482965 ANKRD33Q7Z3H0 272 aa9.97□□□□□ -0.81
SNX4-205ENST00000482965 SLC43A3Q8NBI5 491 aa9.97□□□□□ -0.81
SNX4-205ENST00000482965 OXER1Q8TDS5 423 aa9.97□□□□□ -0.81
SNX4-205ENST00000482965 C8orf76Q96K31 380 aa9.97□□□□□ -0.81
SNX4-205ENST00000482965 TOX2Q96NM4 488 aa9.97□□□□□ -0.81
SNX4-205ENST00000482965 GPR20Q99678 358 aa9.97□□□□□ -0.81
SNX4-205ENST00000482965 KATNAL1Q9BW62 490 aa9.97□□□□□ -0.81
SNX4-205ENST00000482965 AGO4Q9HCK5 861 aaKnown RBP9.97□□□□□ -0.81
SNX4-205ENST00000482965 PDLIM7Q9NR12 457 aa9.97□□□□□ -0.81
SNX4-205ENST00000482965 TMEM39AQ9NV64 488 aa9.97□□□□□ -0.81
SNX4-205ENST00000482965 GRIN2DO15399 1336 aa9.97□□□□□ -0.81
SNX4-205ENST00000482965 TNRC18O15417 2968 aaPredicted RBP9.97□□□□□ -0.81
SNX4-205ENST00000482965 MYH9P35579 1960 aaKnown RBP9.97□□□□□ -0.81
SNX4-205ENST00000482965 LTBP2Q14767 1821 aa9.96□□□□□ -0.81
SNX4-205ENST00000482965 IGLV3-22A0A075B6J6 115 aa9.96□□□□□ -0.82
SNX4-205ENST00000482965 F2P00734 622 aa9.96□□□□□ -0.82
SNX4-205ENST00000482965 MMP1P03956 469 aa9.96□□□□□ -0.82
SNX4-205ENST00000482965 LGALS2P05162 132 aa9.96□□□□□ -0.82
SNX4-205ENST00000482965 CIITAP33076 1130 aa9.96□□□□□ -0.82
SNX4-205ENST00000482965 GUCY1B3Q02153 619 aa9.96□□□□□ -0.82
SNX4-205ENST00000482965 FAAP100Q0VG06 881 aa9.96□□□□□ -0.82
SNX4-205ENST00000482965 MFSD10Q14728 455 aa9.96□□□□□ -0.82
SNX4-205ENST00000482965 SAFBQ15424 915 aaKnown RBP eCLIP9.96□□□□□ -0.82
SNX4-205ENST00000482965 INF2Q27J81 1249 aa9.96□□□□□ -0.82
SNX4-205ENST00000482965 UTP14CQ5TAP6 766 aaKnown RBP9.96□□□□□ -0.82
SNX4-205ENST00000482965 NFRKBQ6P4R8 1299 aa9.96□□□□□ -0.82
SNX4-205ENST00000482965 PIK3AP1Q6ZUJ8 805 aa9.96□□□□□ -0.82
SNX4-205ENST00000482965 FAM126BQ8IXS8 530 aa9.96□□□□□ -0.82
SNX4-205ENST00000482965 DIS3L2Q8IYB7 885 aaKnown RBP9.96□□□□□ -0.82
SNX4-205ENST00000482965 PPP1R13LQ8WUF5 828 aa9.96□□□□□ -0.82
SNX4-205ENST00000482965 SEPT1Q8WYJ6 367 aa9.96□□□□□ -0.82
SNX4-205ENST00000482965 KAT2BQ92831 832 aa9.96□□□□□ -0.82
SNX4-205ENST00000482965 UIMC1Q96RL1 719 aa9.96□□□□□ -0.82
SNX4-205ENST00000482965 ZNF577Q9BSK1 485 aa9.96□□□□□ -0.82
SNX4-205ENST00000482965 JPH1Q9HDC5 661 aaPredicted RBP9.96□□□□□ -0.82
SNX4-205ENST00000482965 SLC9A2Q9UBY0 812 aa9.96□□□□□ -0.82
SNX4-205ENST00000482965 TCEAL9Q9UHQ7 104 aa9.96□□□□□ -0.82
SNX4-205ENST00000482965 KIF3AQ9Y496 699 aa9.96□□□□□ -0.82
SNX4-205ENST00000482965 NFASCO94856 1347 aa9.96□□□□□ -0.82
SNX4-205ENST00000482965 WDR81Q562E7 1941 aa9.95□□□□□ -0.82
SNX4-205ENST00000482965 BTBD18B2RXH4 712 aa9.95□□□□□ -0.82
SNX4-205ENST00000482965 DDX39AO00148 427 aaKnown RBP9.95□□□□□ -0.82
SNX4-205ENST00000482965 IPO5O00410 1097 aaKnown RBP9.95□□□□□ -0.82
SNX4-205ENST00000482965 KIAA0355O15063 1070 aa9.95□□□□□ -0.82
SNX4-205ENST00000482965 RAG1P15918 1043 aa9.95□□□□□ -0.82
SNX4-205ENST00000482965 TCF7P36402 384 aaPredicted RBP9.95□□□□□ -0.82
SNX4-205ENST00000482965 PTPN11Q06124 597 aaPredicted RBP9.95□□□□□ -0.82
SNX4-205ENST00000482965 NR5A1Q13285 461 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms