RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 BUB1BO60566 1050 aaPredicted RBP13.65□□□□□ -0.22
CCDC78-213ENST00000482878 KRT14P02533 472 aa13.65□□□□□ -0.22
CCDC78-213ENST00000482878 RASA1P20936 1047 aa13.65□□□□□ -0.22
CCDC78-213ENST00000482878 TXKP42681 527 aa13.65□□□□□ -0.22
CCDC78-213ENST00000482878 USP17L2Q6R6M4 530 aa13.65□□□□□ -0.22
CCDC78-213ENST00000482878 DYMQ7RTS9 669 aa13.65□□□□□ -0.22
CCDC78-213ENST00000482878 RNPC3Q96LT9 517 aaKnown RBP13.65□□□□□ -0.22
CCDC78-213ENST00000482878 ANKRD2Q9GZV1 360 aa13.65□□□□□ -0.22
CCDC78-213ENST00000482878 LAMB1P07942 1786 aa13.65□□□□□ -0.22
CCDC78-213ENST00000482878 PPP1R2P41236 205 aa13.65□□□□□ -0.22
CCDC78-213ENST00000482878 GRB10Q13322 594 aa13.65□□□□□ -0.22
CCDC78-213ENST00000482878 COBLL1Q53SF7 1204 aa13.65□□□□□ -0.22
CCDC78-213ENST00000482878 RRAGAQ7L523 313 aa13.65□□□□□ -0.22
CCDC78-213ENST00000482878 ZNF572Q7Z3I7 529 aaPredicted RBP13.65□□□□□ -0.22
CCDC78-213ENST00000482878 MICAL1Q8TDZ2 1067 aa13.65□□□□□ -0.22
CCDC78-213ENST00000482878 RPGRQ92834 1020 aaKnown RBP13.65□□□□□ -0.22
CCDC78-213ENST00000482878 ZBTB10Q96DT7 871 aa13.65□□□□□ -0.22
CCDC78-213ENST00000482878 BIN2Q9UBW5 565 aaPredicted RBP13.65□□□□□ -0.22
CCDC78-213ENST00000482878 ROBO3Q96MS0 1386 aa13.65□□□□□ -0.22
CCDC78-213ENST00000482878 EME2A4GXA9 379 aaPredicted RBP13.65□□□□□ -0.23
CCDC78-213ENST00000482878 AKR1B10O60218 316 aa13.65□□□□□ -0.23
CCDC78-213ENST00000482878 LCA5LO95447 670 aa13.65□□□□□ -0.23
CCDC78-213ENST00000482878 MRPL12P52815 198 aaKnown RBP13.65□□□□□ -0.23
CCDC78-213ENST00000482878 TTMPQ5BVD1 217 aa13.65□□□□□ -0.23
CCDC78-213ENST00000482878 FAM196AQ6ZSG2 479 aa13.65□□□□□ -0.23
CCDC78-213ENST00000482878 CCDC50Q8IVM0 306 aa13.65□□□□□ -0.23
CCDC78-213ENST00000482878 MAPKAPK5Q8IW41 473 aa13.65□□□□□ -0.23
CCDC78-213ENST00000482878 CCDC155Q8N6L0 562 aa13.65□□□□□ -0.23
CCDC78-213ENST00000482878 CCT8L2Q96SF2 557 aa13.65□□□□□ -0.23
CCDC78-213ENST00000482878 SH3GL2Q99962 352 aa13.65□□□□□ -0.23
CCDC78-213ENST00000482878 SPZ1Q9BXG8 430 aa13.65□□□□□ -0.23
CCDC78-213ENST00000482878 TMEM260Q9NX78 707 aa13.65□□□□□ -0.23
CCDC78-213ENST00000482878 TPX2Q9ULW0 747 aaKnown RBP13.65□□□□□ -0.23
CCDC78-213ENST00000482878 A6NNZ2 444 aa13.64□□□□□ -0.23
CCDC78-213ENST00000482878 AP1G2O75843 785 aa13.64□□□□□ -0.23
CCDC78-213ENST00000482878 LDHBP07195 334 aaKnown RBP13.64□□□□□ -0.23
CCDC78-213ENST00000482878 PRLRP16471 622 aa13.64□□□□□ -0.23
CCDC78-213ENST00000482878 SF3A3Q12874 501 aaKnown RBP eCLIP13.64□□□□□ -0.23
CCDC78-213ENST00000482878 TUBB8Q3ZCM7 444 aa13.64□□□□□ -0.23
CCDC78-213ENST00000482878 CFAP58Q5T655 872 aa13.64□□□□□ -0.23
CCDC78-213ENST00000482878 CCDC181Q5TID7 509 aa13.64□□□□□ -0.23
CCDC78-213ENST00000482878 SPTY2D1Q68D10 685 aaPredicted RBP13.64□□□□□ -0.23
CCDC78-213ENST00000482878 SV2BQ7L1I2 683 aa13.64□□□□□ -0.23
CCDC78-213ENST00000482878 NLRP14Q86W24 1093 aa13.64□□□□□ -0.23
CCDC78-213ENST00000482878 GLIS3Q8NEA6 775 aa13.64□□□□□ -0.23
CCDC78-213ENST00000482878 THOC1Q96FV9 657 aaKnown RBP13.64□□□□□ -0.23
CCDC78-213ENST00000482878 CALML4Q96GE6 196 aa13.64□□□□□ -0.23
CCDC78-213ENST00000482878 EPN3Q9H201 632 aa13.64□□□□□ -0.23
CCDC78-213ENST00000482878 C6orf50Q9HD87 102 aa13.64□□□□□ -0.23
CCDC78-213ENST00000482878 IRAK4Q9NWZ3 460 aa13.64□□□□□ -0.23
CCDC78-213ENST00000482878 COL14A1Q05707 1796 aaKnown RBP13.64□□□□□ -0.23
CCDC78-213ENST00000482878 IRS2Q9Y4H2 1338 aa13.64□□□□□ -0.23
CCDC78-213ENST00000482878 WLSQ5T9L3 541 aa13.64□□□□□ -0.23
CCDC78-213ENST00000482878 MSL1Q68DK7 614 aa13.64□□□□□ -0.23
CCDC78-213ENST00000482878 BAP1Q92560 729 aa13.64□□□□□ -0.23
CCDC78-213ENST00000482878 PNMA5Q96PV4 448 aa13.64□□□□□ -0.23
CCDC78-213ENST00000482878 SH3GL3Q99963 347 aa13.64□□□□□ -0.23
CCDC78-213ENST00000482878 LZTS2Q9BRK4 669 aa13.64□□□□□ -0.23
CCDC78-213ENST00000482878 SPATA31A1Q5TZJ5 1347 aa13.64□□□□□ -0.23
CCDC78-213ENST00000482878 RBM5P52756 815 aaKnown RBP eCLIP13.63□□□□□ -0.23
CCDC78-213ENST00000482878 ITIH3Q06033 890 aa13.63□□□□□ -0.23
CCDC78-213ENST00000482878 GFPT1Q06210 699 aaPredicted RBP13.63□□□□□ -0.23
CCDC78-213ENST00000482878 MAN2A1Q16706 1144 aa13.63□□□□□ -0.23
CCDC78-213ENST00000482878 PIGSQ96S52 555 aa13.63□□□□□ -0.23
CCDC78-213ENST00000482878 GNA11P29992 359 aa13.63□□□□□ -0.23
CCDC78-213ENST00000482878 SLC8A1P32418 973 aa13.63□□□□□ -0.23
CCDC78-213ENST00000482878 MAGEA1P43355 309 aa13.63□□□□□ -0.23
CCDC78-213ENST00000482878 HAUS3Q68CZ6 603 aa13.63□□□□□ -0.23
CCDC78-213ENST00000482878 UNC13DQ70J99 1090 aa13.63□□□□□ -0.23
CCDC78-213ENST00000482878 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.63□□□□□ -0.23
CCDC78-213ENST00000482878 MAATS1Q7Z4T9 603 aa13.63□□□□□ -0.23
CCDC78-213ENST00000482878 IQCDQ96DY2 449 aa13.63□□□□□ -0.23
CCDC78-213ENST00000482878 MTMR8Q96EF0 704 aa13.63□□□□□ -0.23
CCDC78-213ENST00000482878 HYOU1Q9Y4L1 999 aa13.63□□□□□ -0.23
CCDC78-213ENST00000482878 RASSF9O75901 435 aa13.63□□□□□ -0.23
CCDC78-213ENST00000482878 MYO1EQ12965 1108 aa13.63□□□□□ -0.23
CCDC78-213ENST00000482878 TSEN2Q8NCE0 465 aaKnown RBP13.63□□□□□ -0.23
CCDC78-213ENST00000482878 CCDC43Q96MW1 224 aaKnown RBP13.63□□□□□ -0.23
CCDC78-213ENST00000482878 CDCA7Q9BWT1 371 aaPredicted RBP13.63□□□□□ -0.23
CCDC78-213ENST00000482878 OPLAHO14841 1288 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 BUB1O43683 1085 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 TCP1P17987 556 aaKnown RBP13.62□□□□□ -0.23
CCDC78-213ENST00000482878 RASSF7Q02833 373 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 LRRC41Q15345 812 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 ASTE1Q2TB18 679 aaPredicted RBP13.62□□□□□ -0.23
CCDC78-213ENST00000482878 LRRC55Q6ZSA7 311 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 PARD3BQ8TEW8 1205 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 IFT81Q8WYA0 676 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 LARP4BQ92615 738 aaKnown RBP13.62□□□□□ -0.23
CCDC78-213ENST00000482878 ALS2CR12Q96Q35 445 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 MTMR9Q96QG7 549 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 NUDT12Q9BQG2 462 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 TLR10Q9BXR5 811 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 BACH1O14867 736 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 SLC37A4O43826 429 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 PPP1R37O75864 691 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 NR1D1P20393 614 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 CDC25CP30307 473 aa13.62□□□□□ -0.23
CCDC78-213ENST00000482878 RBBP5Q15291 538 aaKnown RBP13.62□□□□□ -0.23
CCDC78-213ENST00000482878 TRAPPC3LQ5T215 181 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms