RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 CCHCR1Q8TD31 782 aa12.13□□□□□ -0.47
RPGR-208ENST00000482855 ZNF483Q8TF39 744 aaPredicted RBP12.13□□□□□ -0.47
RPGR-208ENST00000482855 TCP11Q8WWU5 503 aa12.13□□□□□ -0.47
RPGR-208ENST00000482855 MAGOHBQ96A72 148 aaKnown RBP12.13□□□□□ -0.47
RPGR-208ENST00000482855 C15orf41Q9Y2V0 281 aa12.13□□□□□ -0.47
RPGR-208ENST00000482855 PNPLA7Q6ZV29 1317 aa12.13□□□□□ -0.47
RPGR-208ENST00000482855 CNTNAP5Q8WYK1 1306 aa12.13□□□□□ -0.47
RPGR-208ENST00000482855 ECHS1P30084 290 aa12.12□□□□□ -0.47
RPGR-208ENST00000482855 EHHADHQ08426 723 aa12.12□□□□□ -0.47
RPGR-208ENST00000482855 STK4Q13043 487 aa12.12□□□□□ -0.47
RPGR-208ENST00000482855 DDB1Q16531 1140 aa12.12□□□□□ -0.47
RPGR-208ENST00000482855 MEI1Q5TIA1 1274 aa12.12□□□□□ -0.47
RPGR-208ENST00000482855 TAF4BQ92750 862 aa12.12□□□□□ -0.47
RPGR-208ENST00000482855 CHMP6Q96FZ7 201 aa12.12□□□□□ -0.47
RPGR-208ENST00000482855 PACSIN2Q9UNF0 486 aaPredicted RBP12.12□□□□□ -0.47
RPGR-208ENST00000482855 MYH1P12882 1939 aa12.12□□□□□ -0.47
RPGR-208ENST00000482855 BCORQ6W2J9 1755 aa12.12□□□□□ -0.47
RPGR-208ENST00000482855 GSTA1P08263 222 aa12.12□□□□□ -0.47
RPGR-208ENST00000482855 CLTAP09496 248 aa12.12□□□□□ -0.47
RPGR-208ENST00000482855 SCG2P13521 617 aa12.12□□□□□ -0.47
RPGR-208ENST00000482855 RIPK1Q13546 671 aa12.12□□□□□ -0.47
RPGR-208ENST00000482855 KRT71Q3SY84 523 aa12.12□□□□□ -0.47
RPGR-208ENST00000482855 PDXDC1Q6P996 788 aa12.12□□□□□ -0.47
RPGR-208ENST00000482855 PNMA8AQ86V59 439 aaPredicted RBP12.12□□□□□ -0.47
RPGR-208ENST00000482855 LMBR1Q8WVP7 490 aa12.12□□□□□ -0.47
RPGR-208ENST00000482855 BAP1Q92560 729 aa12.12□□□□□ -0.47
RPGR-208ENST00000482855 SPAG5Q96R06 1193 aa12.12□□□□□ -0.47
RPGR-208ENST00000482855 GREM2Q9H772 168 aa12.12□□□□□ -0.47
RPGR-208ENST00000482855 CNOT10Q9H9A5 744 aaKnown RBP12.12□□□□□ -0.47
RPGR-208ENST00000482855 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.12□□□□□ -0.474e-9■■■■□ 22.8
RPGR-208ENST00000482855 FBXL5Q9UKA1 691 aa12.12□□□□□ -0.47
RPGR-208ENST00000482855 ZNF330Q9Y3S2 320 aaPredicted RBP12.12□□□□□ -0.47
RPGR-208ENST00000482855 BAG6P46379 1132 aa12.11□□□□□ -0.47
RPGR-208ENST00000482855 ASIC1P78348 528 aa12.11□□□□□ -0.47
RPGR-208ENST00000482855 TROAPQ12815 778 aa12.11□□□□□ -0.47
RPGR-208ENST00000482855 SLMAPQ14BN4 828 aa12.11□□□□□ -0.47
RPGR-208ENST00000482855 NAB2Q15742 525 aa12.11□□□□□ -0.47
RPGR-208ENST00000482855 MAN2A1Q16706 1144 aa12.11□□□□□ -0.47
RPGR-208ENST00000482855 ZBTB38Q8NAP3 1195 aaPredicted RBP12.11□□□□□ -0.47
RPGR-208ENST00000482855 PSMD1Q99460 953 aa12.11□□□□□ -0.47
RPGR-208ENST00000482855 TRPC6Q9Y210 931 aa12.11□□□□□ -0.47
RPGR-208ENST00000482855 F8W031 263 aaPredicted RBP12.11□□□□□ -0.47
RPGR-208ENST00000482855 RBAK-RBAKDNI3L0D1 243 aa12.11□□□□□ -0.47
RPGR-208ENST00000482855 ANP32DO95626 131 aa12.11□□□□□ -0.47
RPGR-208ENST00000482855 CSB-PGBD3P0DP91 1061 aa12.11□□□□□ -0.47
RPGR-208ENST00000482855 ICA1Q05084 483 aa12.11□□□□□ -0.47
RPGR-208ENST00000482855 SLC9C1Q4G0N8 1177 aa12.11□□□□□ -0.47
RPGR-208ENST00000482855 BZW1Q7L1Q6 419 aaKnown RBP12.11□□□□□ -0.47
RPGR-208ENST00000482855 DDX42Q86XP3 938 aaKnown RBP eCLIP12.11□□□□□ -0.47
RPGR-208ENST00000482855 STAG2Q8N3U4 1231 aa12.11□□□□□ -0.47
RPGR-208ENST00000482855 MIGA1Q8NAN2 632 aa12.11□□□□□ -0.47
RPGR-208ENST00000482855 RNF217Q8TC41 542 aa12.11□□□□□ -0.47
RPGR-208ENST00000482855 CCSER1Q9C0I3 900 aa12.11□□□□□ -0.47
RPGR-208ENST00000482855 MAGEF1Q9HAY2 307 aa12.11□□□□□ -0.47
RPGR-208ENST00000482855 MYH4Q9Y623 1939 aa12.11□□□□□ -0.47
RPGR-208ENST00000482855 DCDC2CA8MYV0 355 aa12.1□□□□□ -0.47
RPGR-208ENST00000482855 DDAH1O94760 285 aa12.1□□□□□ -0.47
RPGR-208ENST00000482855 FCER1AP12319 257 aa12.1□□□□□ -0.47
RPGR-208ENST00000482855 PEX19P40855 299 aa12.1□□□□□ -0.47
RPGR-208ENST00000482855 MAP2K1Q02750 393 aaPredicted RBP12.1□□□□□ -0.47
RPGR-208ENST00000482855 RASGRF1Q13972 1273 aa12.1□□□□□ -0.47
RPGR-208ENST00000482855 XPO6Q96QU8 1125 aaKnown RBP12.1□□□□□ -0.47
RPGR-208ENST00000482855 SH3GL3Q99963 347 aa12.1□□□□□ -0.47
RPGR-208ENST00000482855 CUEDC2Q9H467 287 aa12.1□□□□□ -0.47
RPGR-208ENST00000482855 KIF9Q9HAQ2 790 aa12.1□□□□□ -0.47
RPGR-208ENST00000482855 TMEM59LQ9UK28 342 aa12.1□□□□□ -0.47
RPGR-208ENST00000482855 SLC12A4Q9UP95 1085 aa12.1□□□□□ -0.47
RPGR-208ENST00000482855 PCDHGC5Q9Y5F6 944 aa12.1□□□□□ -0.47
RPGR-208ENST00000482855 COL5A3P25940 1745 aaPredicted RBP12.1□□□□□ -0.47
RPGR-208ENST00000482855 UBR2Q8IWV8 1755 aa12.1□□□□□ -0.47
RPGR-208ENST00000482855 A0A0G2JS52 829 aa12.1□□□□□ -0.47
RPGR-208ENST00000482855 CFAP73A6NFT4 308 aa12.1□□□□□ -0.47
RPGR-208ENST00000482855 CTNND1O60716 968 aaKnown RBP12.1□□□□□ -0.47
RPGR-208ENST00000482855 KLRC1P26715 233 aa12.1□□□□□ -0.47
RPGR-208ENST00000482855 CALML3P27482 149 aa12.1□□□□□ -0.47
RPGR-208ENST00000482855 TRIM28Q13263 835 aaKnown RBP12.1□□□□□ -0.47
RPGR-208ENST00000482855 PUM3Q15397 648 aaKnown RBP12.1□□□□□ -0.47
RPGR-208ENST00000482855 ERMARDQ5T6L9 678 aa12.1□□□□□ -0.47
RPGR-208ENST00000482855 AP1ARQ63HQ0 302 aa12.1□□□□□ -0.47
RPGR-208ENST00000482855 HGSNATQ68CP4 663 aa12.1□□□□□ -0.47
RPGR-208ENST00000482855 CNNM4Q6P4Q7 775 aa12.1□□□□□ -0.47
RPGR-208ENST00000482855 SRBD1Q8N5C6 995 aaKnown RBP12.1□□□□□ -0.47
RPGR-208ENST00000482855 SAAL1Q96ER3 474 aa12.1□□□□□ -0.47
RPGR-208ENST00000482855 FAM129AQ9BZQ8 928 aa12.1□□□□□ -0.47
RPGR-208ENST00000482855 TRIM9Q9C026 710 aa12.1□□□□□ -0.47
RPGR-208ENST00000482855 NEUROG2Q9H2A3 272 aa12.1□□□□□ -0.47
RPGR-208ENST00000482855 NOP53Q9NZM5 478 aaKnown RBP12.1□□□□□ -0.47
RPGR-208ENST00000482855 KCNK3O14649 394 aa12.1□□□□□ -0.47
RPGR-208ENST00000482855 ADAMTS3O15072 1205 aa12.1□□□□□ -0.47
RPGR-208ENST00000482855 CDCA2Q69YH5 1023 aaPredicted RBP12.1□□□□□ -0.47
RPGR-208ENST00000482855 CAPRIN2Q6IMN6 1127 aaKnown RBP12.1□□□□□ -0.47
RPGR-208ENST00000482855 TBC1D1Q86TI0 1168 aaPredicted RBP12.1□□□□□ -0.47
RPGR-208ENST00000482855 BLIDQ8IZY5 108 aa12.1□□□□□ -0.47
RPGR-208ENST00000482855 EDEM3Q9BZQ6 932 aa12.1□□□□□ -0.47
RPGR-208ENST00000482855 SLC39A2Q9NP94 309 aa12.1□□□□□ -0.47
RPGR-208ENST00000482855 L3MBTL1Q9Y468 752 aa12.1□□□□□ -0.47
RPGR-208ENST00000482855 FGFR1OPO95684 399 aaKnown RBP12.09□□□□□ -0.47
RPGR-208ENST00000482855 ITIH4Q14624 930 aa12.09□□□□□ -0.47
RPGR-208ENST00000482855 RPS6KA1Q15418 735 aa12.09□□□□□ -0.47
RPGR-208ENST00000482855 PFKFB3Q16875 520 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms