RNA–Protein interactions for RNA: ENST00000482693.1

SF1-215, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-215ENST00000482693 C1orf53Q5VUE5 145 aa19.03■□□□□ 0.64
SF1-215ENST00000482693 CXCL17Q6UXB2 119 aa19.03■□□□□ 0.64
SF1-215ENST00000482693 SLC39A5Q6ZMH5 540 aa19.03■□□□□ 0.64
SF1-215ENST00000482693 NEK8Q86SG6 692 aa19.03■□□□□ 0.64
SF1-215ENST00000482693 VTI1AQ96AJ9 217 aa19.03■□□□□ 0.64
SF1-215ENST00000482693 SDF4Q9BRK5 362 aa19.03■□□□□ 0.64
SF1-215ENST00000482693 FOXP1Q9H334 677 aaPredicted RBP19.03■□□□□ 0.64
SF1-215ENST00000482693 STARD7Q9NQZ5 370 aa19.03■□□□□ 0.64
SF1-215ENST00000482693 NFASCO94856 1347 aa19.02■□□□□ 0.64
SF1-215ENST00000482693 NOP56O00567 594 aaKnown RBP19.02■□□□□ 0.64
SF1-215ENST00000482693 HOXD8P13378 290 aaPredicted RBP19.02■□□□□ 0.64
SF1-215ENST00000482693 HSDL1Q3SXM5 330 aa19.02■□□□□ 0.64
SF1-215ENST00000482693 Q4G0T1 1027 aa19.02■□□□□ 0.64
SF1-215ENST00000482693 PPP4R3AQ6IN85 833 aa19.02■□□□□ 0.64
SF1-215ENST00000482693 MBOAT7Q96N66 472 aa19.02■□□□□ 0.64
SF1-215ENST00000482693 MTG1Q9BT17 334 aaPredicted RBP19.02■□□□□ 0.64
SF1-215ENST00000482693 SEZ6LQ9BYH1 1024 aa19.02■□□□□ 0.64
SF1-215ENST00000482693 BCAS3Q9H6U6 928 aa19.02■□□□□ 0.64
SF1-215ENST00000482693 IPO5O00410 1097 aaKnown RBP19.01■□□□□ 0.63
SF1-215ENST00000482693 SORBS3O60504 671 aa19.01■□□□□ 0.63
SF1-215ENST00000482693 GCFC2P16383 781 aaKnown RBP19.01■□□□□ 0.63
SF1-215ENST00000482693 GNL2Q13823 731 aaKnown RBP19.01■□□□□ 0.63
SF1-215ENST00000482693 SNX17Q15036 470 aa19.01■□□□□ 0.63
SF1-215ENST00000482693 LETM2Q2VYF4 491 aa19.01■□□□□ 0.63
SF1-215ENST00000482693 EARS2Q5JPH6 523 aaKnown RBP19.01■□□□□ 0.63
SF1-215ENST00000482693 LENG9Q96B70 501 aa19.01■□□□□ 0.63
SF1-215ENST00000482693 GPR20Q99678 358 aa19.01■□□□□ 0.63
SF1-215ENST00000482693 ZNF577Q9BSK1 485 aa19.01■□□□□ 0.63
SF1-215ENST00000482693 TBC1D22BQ9NU19 505 aa19.01■□□□□ 0.63
SF1-215ENST00000482693 PKD2L1Q9P0L9 805 aa19.01■□□□□ 0.63
SF1-215ENST00000482693 A0A0U1RQG5 324 aaPredicted RBP19■□□□□ 0.63
SF1-215ENST00000482693 H3BQV1 296 aa19■□□□□ 0.63
SF1-215ENST00000482693 PDCP20941 246 aa19■□□□□ 0.63
SF1-215ENST00000482693 U2AF2P26368 475 aaKnown RBP eCLIP19■□□□□ 0.634e-8■■■■■ 44.5
SF1-215ENST00000482693 ATN1P54259 1190 aaPredicted RBP19■□□□□ 0.63
SF1-215ENST00000482693 ITGB3BPQ13352 177 aaPredicted RBP19■□□□□ 0.63
SF1-215ENST00000482693 LRRC26Q2I0M4 334 aa19■□□□□ 0.63
SF1-215ENST00000482693 LARP1BQ659C4 914 aaKnown RBP19■□□□□ 0.63
SF1-215ENST00000482693 DPF3Q92784 378 aa19■□□□□ 0.63
SF1-215ENST00000482693 JPH1Q9HDC5 661 aaPredicted RBP19■□□□□ 0.63
SF1-215ENST00000482693 SLC9A2Q9UBY0 812 aa19■□□□□ 0.63
SF1-215ENST00000482693 TDP2O95551 362 aa18.99■□□□□ 0.63
SF1-215ENST00000482693 NOSTRINQ8IVI9 506 aa18.99■□□□□ 0.63
SF1-215ENST00000482693 SLC43A3Q8NBI5 491 aa18.99■□□□□ 0.63
SF1-215ENST00000482693 SEPT1Q8WYJ6 367 aa18.99■□□□□ 0.63
SF1-215ENST00000482693 DDX25Q9UHL0 483 aaKnown RBP18.99■□□□□ 0.63
SF1-215ENST00000482693 FAM205CA6NFA0 338 aa18.98■□□□□ 0.63
SF1-215ENST00000482693 ARVCFO00192 962 aa18.98■□□□□ 0.63
SF1-215ENST00000482693 MSH4O15457 936 aa18.98■□□□□ 0.63
SF1-215ENST00000482693 DHX15O43143 795 aaKnown RBP18.98■□□□□ 0.63
SF1-215ENST00000482693 EVI5O60447 810 aa18.98■□□□□ 0.63
SF1-215ENST00000482693 CCNT1O60563 726 aaKnown RBP18.98■□□□□ 0.63
SF1-215ENST00000482693 CDK7P50613 346 aa18.98■□□□□ 0.63
SF1-215ENST00000482693 ITGA7Q13683 1181 aa18.98■□□□□ 0.63
SF1-215ENST00000482693 RIT2Q99578 217 aa18.98■□□□□ 0.63
SF1-215ENST00000482693 RTP1P59025 263 aa18.97■□□□□ 0.63
SF1-215ENST00000482693 PSMC6P62333 389 aa18.97■□□□□ 0.63
SF1-215ENST00000482693 SP4Q02446 784 aa18.97■□□□□ 0.63
SF1-215ENST00000482693 ANKRD33Q7Z3H0 272 aa18.97■□□□□ 0.63
SF1-215ENST00000482693 KAT2BQ92831 832 aa18.97■□□□□ 0.63
SF1-215ENST00000482693 SLC5A5Q92911 643 aa18.97■□□□□ 0.63
SF1-215ENST00000482693 TOX2Q96NM4 488 aa18.97■□□□□ 0.63
SF1-215ENST00000482693 KATNAL1Q9BW62 490 aa18.97■□□□□ 0.63
SF1-215ENST00000482693 TCEAL9Q9UHQ7 104 aa18.97■□□□□ 0.63
SF1-215ENST00000482693 NR2E3Q9Y5X4 410 aa18.97■□□□□ 0.63
SF1-215ENST00000482693 GRIN2DO15399 1336 aa18.97■□□□□ 0.63
SF1-215ENST00000482693 MROH7Q68CQ1 1323 aa18.97■□□□□ 0.63
SF1-215ENST00000482693 MYH7BA7E2Y1 1941 aa18.96■□□□□ 0.63
SF1-215ENST00000482693 GSTTP1A0A1W2PQM5 241 aa18.96■□□□□ 0.63
SF1-215ENST00000482693 TBX3O15119 743 aa18.96■□□□□ 0.63
SF1-215ENST00000482693 F2P00734 622 aa18.96■□□□□ 0.63
SF1-215ENST00000482693 LGALS2P05162 132 aa18.96■□□□□ 0.63
SF1-215ENST00000482693 HSP90AA1P07900 732 aaKnown RBP18.96■□□□□ 0.63
SF1-215ENST00000482693 TCF7P36402 384 aaPredicted RBP18.96■□□□□ 0.63
SF1-215ENST00000482693 TRAPPC10P48553 1259 aa18.96■□□□□ 0.63
SF1-215ENST00000482693 ACTR2P61160 394 aa18.96■□□□□ 0.63
SF1-215ENST00000482693 NBPF20Q3BBV1 942 aa18.96■□□□□ 0.63
SF1-215ENST00000482693 TRIM60Q495X7 471 aa18.96■□□□□ 0.63
SF1-215ENST00000482693 MCTP1Q6DN14 999 aa18.96■□□□□ 0.63
SF1-215ENST00000482693 NFRKBQ6P4R8 1299 aa18.96■□□□□ 0.63
SF1-215ENST00000482693 FAM20AQ96MK3 541 aa18.96■□□□□ 0.63
SF1-215ENST00000482693 C16orf70Q9BSU1 422 aa18.96■□□□□ 0.63
SF1-215ENST00000482693 ATP11BQ9Y2G3 1177 aa18.96■□□□□ 0.63
SF1-215ENST00000482693 DCDC2CA8MYV0 355 aa18.95■□□□□ 0.62
SF1-215ENST00000482693 KIF28PB7ZC32 967 aa18.95■□□□□ 0.62
SF1-215ENST00000482693 H3BRB1 525 aa18.95■□□□□ 0.62
SF1-215ENST00000482693 HAS3O00219 553 aa18.95■□□□□ 0.62
SF1-215ENST00000482693 SLC37A4O43826 429 aa18.95■□□□□ 0.62
SF1-215ENST00000482693 GAS7O60861 476 aa18.95■□□□□ 0.62
SF1-215ENST00000482693 ATG7O95352 703 aa18.95■□□□□ 0.62
SF1-215ENST00000482693 ZNF286BP0CG31 522 aa18.95■□□□□ 0.62
SF1-215ENST00000482693 PSEN2P49810 448 aa18.95■□□□□ 0.62
SF1-215ENST00000482693 KRT76Q01546 638 aa18.95■□□□□ 0.62
SF1-215ENST00000482693 TLE2Q04725 743 aa18.95■□□□□ 0.62
SF1-215ENST00000482693 PTPN11Q06124 597 aaPredicted RBP18.95■□□□□ 0.62
SF1-215ENST00000482693 ZNF746Q6NUN9 644 aaPredicted RBP18.95■□□□□ 0.62
SF1-215ENST00000482693 ETNPPLQ8TBG4 499 aa18.95■□□□□ 0.62
SF1-215ENST00000482693 UIMC1Q96RL1 719 aa18.95■□□□□ 0.62
SF1-215ENST00000482693 TUT1Q9H6E5 874 aaKnown RBP18.95■□□□□ 0.62
SF1-215ENST00000482693 KCNMB3Q9NPA1 279 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 219.3 ms