RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 TEPPQ6URK8 271 aa5.63□□□□□ -1.51
GTF3A-207ENST00000482655 ZNF761Q86XN6 746 aaPredicted RBP5.63□□□□□ -1.51
GTF3A-207ENST00000482655 ADAMTS17Q8TE56 1095 aa5.63□□□□□ -1.51
GTF3A-207ENST00000482655 WRNIP1Q96S55 665 aa5.63□□□□□ -1.51
GTF3A-207ENST00000482655 KCNJ15Q99712 375 aa5.63□□□□□ -1.51
GTF3A-207ENST00000482655 BDH2Q9BUT1 245 aa5.63□□□□□ -1.51
GTF3A-207ENST00000482655 CCDC113Q9H0I3 377 aa5.63□□□□□ -1.51
GTF3A-207ENST00000482655 CDIP1Q9H305 208 aa5.63□□□□□ -1.51
GTF3A-207ENST00000482655 FAM47E-STBD1D6RA91 191 aa5.62□□□□□ -1.51
GTF3A-207ENST00000482655 SLC27A2O14975 620 aa5.62□□□□□ -1.51
GTF3A-207ENST00000482655 NOBOXO60393 691 aa5.62□□□□□ -1.51
GTF3A-207ENST00000482655 SOD2P04179 222 aa5.62□□□□□ -1.51
GTF3A-207ENST00000482655 NTRK3Q16288 839 aa5.62□□□□□ -1.51
GTF3A-207ENST00000482655 RGL3Q3MIN7 710 aa5.62□□□□□ -1.51
GTF3A-207ENST00000482655 FAM26FQ5R3K3 315 aa5.62□□□□□ -1.51
GTF3A-207ENST00000482655 OTOP3Q7RTS5 596 aa5.62□□□□□ -1.51
GTF3A-207ENST00000482655 SCUBE1Q8IWY4 988 aa5.62□□□□□ -1.51
GTF3A-207ENST00000482655 DDX1Q92499 740 aaKnown RBP5.62□□□□□ -1.51
GTF3A-207ENST00000482655 ZSWIM3Q96MP5 696 aa5.62□□□□□ -1.51
GTF3A-207ENST00000482655 TMEM209Q96SK2 561 aa5.62□□□□□ -1.51
GTF3A-207ENST00000482655 ASH2LQ9UBL3 628 aa5.62□□□□□ -1.51
GTF3A-207ENST00000482655 TRBV23-1A0A0A0MS06 115 aa5.61□□□□□ -1.51
GTF3A-207ENST00000482655 AQP7O14520 342 aa5.61□□□□□ -1.51
GTF3A-207ENST00000482655 APPP05067 770 aa5.61□□□□□ -1.51
GTF3A-207ENST00000482655 CNR2P34972 360 aa5.61□□□□□ -1.51
GTF3A-207ENST00000482655 BUD31P41223 144 aaPredicted RBP5.61□□□□□ -1.51
GTF3A-207ENST00000482655 SUMO1P63165 101 aaKnown RBP5.61□□□□□ -1.51
GTF3A-207ENST00000482655 KIAA2012Q0VF49 1180 aa5.61□□□□□ -1.51
GTF3A-207ENST00000482655 RTP5Q14D33 572 aa5.61□□□□□ -1.51
GTF3A-207ENST00000482655 SF3A1Q15459 793 aaKnown RBP5.61□□□□□ -1.51
GTF3A-207ENST00000482655 BORAQ6PGQ7 559 aa5.61□□□□□ -1.51
GTF3A-207ENST00000482655 MAMDC2Q7Z304 686 aaPredicted RBP5.61□□□□□ -1.51
GTF3A-207ENST00000482655 MTDHQ86UE4 582 aaKnown RBP5.61□□□□□ -1.51
GTF3A-207ENST00000482655 ZBTB38Q8NAP3 1195 aaPredicted RBP5.61□□□□□ -1.51
GTF3A-207ENST00000482655 TTLL11Q8NHH1 800 aa5.61□□□□□ -1.51
GTF3A-207ENST00000482655 LNPKQ9C0E8 428 aa5.61□□□□□ -1.51
GTF3A-207ENST00000482655 L2HGDHQ9H9P8 463 aa5.61□□□□□ -1.51
GTF3A-207ENST00000482655 DDX3XO00571 662 aaKnown RBP eCLIP5.6□□□□□ -1.51
GTF3A-207ENST00000482655 PRICKLE3O43900 615 aaPredicted RBP5.6□□□□□ -1.51
GTF3A-207ENST00000482655 LRG1P02750 347 aa5.6□□□□□ -1.51
GTF3A-207ENST00000482655 COL6A2P12110 1019 aa5.6□□□□□ -1.51
GTF3A-207ENST00000482655 NAT1P18440 290 aa5.6□□□□□ -1.51
GTF3A-207ENST00000482655 PLP2Q04941 152 aa5.6□□□□□ -1.51
GTF3A-207ENST00000482655 ADAM9Q13443 819 aa5.6□□□□□ -1.51
GTF3A-207ENST00000482655 ZFYVE27Q5T4F4 411 aa5.6□□□□□ -1.51
GTF3A-207ENST00000482655 MCTP2Q6DN12 878 aa5.6□□□□□ -1.51
GTF3A-207ENST00000482655 VASNQ6EMK4 673 aa5.6□□□□□ -1.51
GTF3A-207ENST00000482655 TMC5Q6UXY8 1006 aa5.6□□□□□ -1.51
GTF3A-207ENST00000482655 FERMT3Q86UX7 667 aa5.6□□□□□ -1.51
GTF3A-207ENST00000482655 UHMK1Q8TAS1 419 aaKnown RBP5.6□□□□□ -1.51
GTF3A-207ENST00000482655 DEPDC7Q96QD5 511 aa5.6□□□□□ -1.51
GTF3A-207ENST00000482655 CROTQ9UKG9 612 aa5.6□□□□□ -1.51
GTF3A-207ENST00000482655 DSEQ9UL01 958 aa5.6□□□□□ -1.51
GTF3A-207ENST00000482655 TRAF6Q9Y4K3 522 aa5.6□□□□□ -1.51
GTF3A-207ENST00000482655 SHROOM4Q9ULL8 1493 aa5.59□□□□□ -1.51
GTF3A-207ENST00000482655 KDM2BQ8NHM5 1336 aa5.59□□□□□ -1.51
GTF3A-207ENST00000482655 MROH6A6NGR9 719 aa5.59□□□□□ -1.51
GTF3A-207ENST00000482655 ADCY3O60266 1144 aa5.59□□□□□ -1.51
GTF3A-207ENST00000482655 IGSF3O75054 1194 aa5.59□□□□□ -1.51
GTF3A-207ENST00000482655 CYP1A1P04798 512 aaPredicted RBP5.59□□□□□ -1.51
GTF3A-207ENST00000482655 GRIN1Q05586 938 aa5.59□□□□□ -1.51
GTF3A-207ENST00000482655 PAK1Q13153 545 aa5.59□□□□□ -1.51
GTF3A-207ENST00000482655 TUSC3Q13454 348 aa5.59□□□□□ -1.51
GTF3A-207ENST00000482655 SOGA3Q5TF21 947 aa5.59□□□□□ -1.51
GTF3A-207ENST00000482655 LGI4Q8N135 537 aa5.59□□□□□ -1.51
GTF3A-207ENST00000482655 SREK1Q8WXA9 508 aaKnown RBP5.59□□□□□ -1.51
GTF3A-207ENST00000482655 PTPRN2Q92932 1015 aa5.59□□□□□ -1.51
GTF3A-207ENST00000482655 LCORQ96JN0 433 aaPredicted RBP5.59□□□□□ -1.51
GTF3A-207ENST00000482655 IPPKQ9H8X2 491 aa5.59□□□□□ -1.51
GTF3A-207ENST00000482655 DIAPH1O60610 1272 aaKnown RBP5.58□□□□□ -1.52
GTF3A-207ENST00000482655 ZNF28P17035 718 aa5.58□□□□□ -1.52
GTF3A-207ENST00000482655 GABREP78334 506 aa5.58□□□□□ -1.52
GTF3A-207ENST00000482655 SKOR2Q2VWA4 1001 aaPredicted RBP5.58□□□□□ -1.52
GTF3A-207ENST00000482655 FAM209AQ5JX71 171 aa5.58□□□□□ -1.52
GTF3A-207ENST00000482655 PRR31Q5SQ13 230 aa5.58□□□□□ -1.52
GTF3A-207ENST00000482655 EP400NLQ6ZTU2 488 aa5.58□□□□□ -1.52
GTF3A-207ENST00000482655 LRP10Q7Z4F1 713 aa5.58□□□□□ -1.52
GTF3A-207ENST00000482655 PRRT2Q7Z6L0 340 aaPredicted RBP5.58□□□□□ -1.52
GTF3A-207ENST00000482655 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.58□□□□□ -1.52
GTF3A-207ENST00000482655 RBM12BQ8IXT5 1001 aaKnown RBP5.58□□□□□ -1.52
GTF3A-207ENST00000482655 TXNDC5Q8NBS9 432 aaKnown RBP5.58□□□□□ -1.52
GTF3A-207ENST00000482655 DRC1Q96MC2 740 aa5.58□□□□□ -1.52
GTF3A-207ENST00000482655 SRPK1Q96SB4 655 aaKnown RBP5.58□□□□□ -1.52
GTF3A-207ENST00000482655 TMEM168Q9H0V1 697 aa5.58□□□□□ -1.52
GTF3A-207ENST00000482655 SNTG2Q9NY99 539 aa5.58□□□□□ -1.52
GTF3A-207ENST00000482655 HSPBP1Q9NZL4 362 aa5.58□□□□□ -1.52
GTF3A-207ENST00000482655 FTSJ1Q9UET6 329 aa5.58□□□□□ -1.52
GTF3A-207ENST00000482655 DUSP10Q9Y6W6 482 aa5.58□□□□□ -1.52
GTF3A-207ENST00000482655 ASXL2Q76L83 1435 aa5.57□□□□□ -1.52
GTF3A-207ENST00000482655 C9orf118A6NHY6 69 aa5.57□□□□□ -1.52
GTF3A-207ENST00000482655 K7ESM1 405 aa5.57□□□□□ -1.52
GTF3A-207ENST00000482655 NKRFO15226 690 aaKnown RBP eCLIP5.57□□□□□ -1.52
GTF3A-207ENST00000482655 IL13P35225 146 aa5.57□□□□□ -1.52
GTF3A-207ENST00000482655 GUCY1A3Q02108 690 aa5.57□□□□□ -1.52
GTF3A-207ENST00000482655 SERINC3Q13530 473 aa5.57□□□□□ -1.52
GTF3A-207ENST00000482655 RASA3Q14644 834 aa5.57□□□□□ -1.52
GTF3A-207ENST00000482655 LONRF2Q1L5Z9 754 aa5.57□□□□□ -1.52
GTF3A-207ENST00000482655 PAN2Q504Q3 1202 aaKnown RBP5.57□□□□□ -1.52
GTF3A-207ENST00000482655 ZC3H12BQ5HYM0 836 aaKnown RBP5.57□□□□□ -1.52
GTF3A-207ENST00000482655 TRMT10BQ6PF06 316 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms