RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 LHX8Q68G74 356 aa22.55■■□□□ 1.2
TRAPPC12-220ENST00000482645 MBOAT7Q96N66 472 aa22.55■■□□□ 1.2
TRAPPC12-220ENST00000482645 SYNRGQ9UMZ2 1314 aa22.54■■□□□ 1.2
TRAPPC12-220ENST00000482645 FRMPD3Q5JV73 1810 aa22.54■■□□□ 1.2
TRAPPC12-220ENST00000482645 C6orf222P0C671 652 aaPredicted RBP22.54■■□□□ 1.2
TRAPPC12-220ENST00000482645 NEDD9Q14511 834 aa22.54■■□□□ 1.2
TRAPPC12-220ENST00000482645 ABHD8Q96I13 439 aa22.54■■□□□ 1.2
TRAPPC12-220ENST00000482645 SDF4Q9BRK5 362 aa22.54■■□□□ 1.2
TRAPPC12-220ENST00000482645 SPC25Q9HBM1 224 aa22.54■■□□□ 1.2
TRAPPC12-220ENST00000482645 GJB1P08034 283 aa22.53■■□□□ 1.2
TRAPPC12-220ENST00000482645 ARHGAP1Q07960 439 aa22.53■■□□□ 1.2
TRAPPC12-220ENST00000482645 ITGB3BPQ13352 177 aaPredicted RBP22.53■■□□□ 1.2
TRAPPC12-220ENST00000482645 CALCRLQ16602 461 aa22.53■■□□□ 1.2
TRAPPC12-220ENST00000482645 CELF3Q5SZQ8 465 aaKnown RBP22.53■■□□□ 1.2
TRAPPC12-220ENST00000482645 U2AF1L4Q8WU68 220 aaKnown RBP22.53■■□□□ 1.2
TRAPPC12-220ENST00000482645 GBP4Q96PP9 640 aa22.53■■□□□ 1.2
TRAPPC12-220ENST00000482645 SENP7Q9BQF6 1050 aa22.53■■□□□ 1.2
TRAPPC12-220ENST00000482645 FTOQ9C0B1 505 aaKnown RBP eCLIP22.53■■□□□ 1.2
TRAPPC12-220ENST00000482645 KIAA0100Q14667 2235 aaKnown RBP22.53■■□□□ 1.2
TRAPPC12-220ENST00000482645 BAG4O95429 457 aaKnown RBP22.52■■□□□ 1.2
TRAPPC12-220ENST00000482645 TFRCP02786 760 aaKnown RBP22.52■■□□□ 1.2
TRAPPC12-220ENST00000482645 KRT85P78386 507 aa22.52■■□□□ 1.2
TRAPPC12-220ENST00000482645 BEX3Q00994 111 aa22.52■■□□□ 1.2
TRAPPC12-220ENST00000482645 CEBPZQ03701 1054 aaKnown RBP22.52■■□□□ 1.2
TRAPPC12-220ENST00000482645 GIMAP8Q8ND71 665 aaPredicted RBP22.52■■□□□ 1.2
TRAPPC12-220ENST00000482645 SPATA33Q96N06 139 aa22.52■■□□□ 1.2
TRAPPC12-220ENST00000482645 ZNF396Q96N95 335 aaPredicted RBP22.52■■□□□ 1.2
TRAPPC12-220ENST00000482645 MYADML2A6NDP7 307 aa22.52■■□□□ 1.19
TRAPPC12-220ENST00000482645 NOP56O00567 594 aaKnown RBP22.52■■□□□ 1.19
TRAPPC12-220ENST00000482645 GAS7O60861 476 aa22.52■■□□□ 1.19
TRAPPC12-220ENST00000482645 FARP2O94887 1054 aaPredicted RBP22.52■■□□□ 1.19
TRAPPC12-220ENST00000482645 LAMC2Q13753 1193 aa22.52■■□□□ 1.19
TRAPPC12-220ENST00000482645 LRCH2Q5VUJ6 765 aa22.52■■□□□ 1.19
TRAPPC12-220ENST00000482645 METTL7BQ6UX53 244 aa22.52■■□□□ 1.19
TRAPPC12-220ENST00000482645 ETNPPLQ8TBG4 499 aa22.52■■□□□ 1.19
TRAPPC12-220ENST00000482645 AFG1LQ8WV93 481 aa22.52■■□□□ 1.19
TRAPPC12-220ENST00000482645 TMEM60Q9H2L4 133 aa22.52■■□□□ 1.19
TRAPPC12-220ENST00000482645 JPH1Q9HDC5 661 aaPredicted RBP22.52■■□□□ 1.19
TRAPPC12-220ENST00000482645 SGPL1O95470 568 aa22.51■■□□□ 1.19
TRAPPC12-220ENST00000482645 GJA9P57773 515 aa22.51■■□□□ 1.19
TRAPPC12-220ENST00000482645 HSDL1Q3SXM5 330 aa22.51■■□□□ 1.19
TRAPPC12-220ENST00000482645 USP28Q96RU2 1077 aa22.51■■□□□ 1.19
TRAPPC12-220ENST00000482645 KCNMB3Q9NPA1 279 aa22.51■■□□□ 1.19
TRAPPC12-220ENST00000482645 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.51■■□□□ 1.19
TRAPPC12-220ENST00000482645 TCEAL9Q9UHQ7 104 aa22.51■■□□□ 1.19
TRAPPC12-220ENST00000482645 Q9Y3F1 56 aa22.51■■□□□ 1.19
TRAPPC12-220ENST00000482645 TELO2Q9Y4R8 837 aa22.51■■□□□ 1.19
TRAPPC12-220ENST00000482645 POTEFA5A3E0 1075 aa22.5■■□□□ 1.19
TRAPPC12-220ENST00000482645 CHMP2AO43633 222 aa22.5■■□□□ 1.19
TRAPPC12-220ENST00000482645 ADAMTS4O75173 837 aa22.5■■□□□ 1.19
TRAPPC12-220ENST00000482645 PTGDRQ13258 359 aa22.5■■□□□ 1.19
TRAPPC12-220ENST00000482645 FSCN1Q16658 493 aaKnown RBP22.5■■□□□ 1.19
TRAPPC12-220ENST00000482645 GNASQ5JWF2 1037 aa22.5■■□□□ 1.19
TRAPPC12-220ENST00000482645 RNF180Q86T96 592 aa22.5■■□□□ 1.19
TRAPPC12-220ENST00000482645 HAS1Q92839 578 aa22.5■■□□□ 1.19
TRAPPC12-220ENST00000482645 SLC5A5Q92911 643 aa22.5■■□□□ 1.19
TRAPPC12-220ENST00000482645 TEKT3Q9BXF9 490 aa22.5■■□□□ 1.19
TRAPPC12-220ENST00000482645 TBC1D22BQ9NU19 505 aa22.5■■□□□ 1.19
TRAPPC12-220ENST00000482645 TFIP11Q9UBB9 837 aaKnown RBP22.5■■□□□ 1.19
TRAPPC12-220ENST00000482645 SLC9A2Q9UBY0 812 aa22.5■■□□□ 1.19
TRAPPC12-220ENST00000482645 NFASCO94856 1347 aa22.49■■□□□ 1.19
TRAPPC12-220ENST00000482645 CCDC85CA6NKD9 419 aa22.49■■□□□ 1.19
TRAPPC12-220ENST00000482645 DHX15O43143 795 aaKnown RBP22.49■■□□□ 1.19
TRAPPC12-220ENST00000482645 TXKP42681 527 aa22.49■■□□□ 1.19
TRAPPC12-220ENST00000482645 GJA8P48165 433 aa22.49■■□□□ 1.19
TRAPPC12-220ENST00000482645 CPT1AP50416 773 aa22.49■■□□□ 1.19
TRAPPC12-220ENST00000482645 ORC2Q13416 577 aaPredicted RBP22.49■■□□□ 1.19
TRAPPC12-220ENST00000482645 LRRC41Q15345 812 aa22.49■■□□□ 1.19
TRAPPC12-220ENST00000482645 SLFN12Q8IYM2 578 aa22.49■■□□□ 1.19
TRAPPC12-220ENST00000482645 UPF3AQ9H1J1 476 aaKnown RBP22.49■■□□□ 1.19
TRAPPC12-220ENST00000482645 GDPD2Q9HCC8 539 aa22.49■■□□□ 1.19
TRAPPC12-220ENST00000482645 TBX3O15119 743 aa22.48■■□□□ 1.19
TRAPPC12-220ENST00000482645 OR52Z1P0C646 297 aa22.48■■□□□ 1.19
TRAPPC12-220ENST00000482645 SF3A1Q15459 793 aaKnown RBP22.48■■□□□ 1.19
TRAPPC12-220ENST00000482645 BRDTQ58F21 947 aaPredicted RBP22.48■■□□□ 1.19
TRAPPC12-220ENST00000482645 ARRDC4Q8NCT1 418 aa22.48■■□□□ 1.19
TRAPPC12-220ENST00000482645 PPTC7Q8NI37 304 aa22.48■■□□□ 1.19
TRAPPC12-220ENST00000482645 EMID1Q96A84 441 aaPredicted RBP22.48■■□□□ 1.19
TRAPPC12-220ENST00000482645 FAM20AQ96MK3 541 aa22.48■■□□□ 1.19
TRAPPC12-220ENST00000482645 RIT2Q99578 217 aa22.48■■□□□ 1.19
TRAPPC12-220ENST00000482645 OGDHLQ9ULD0 1010 aa22.48■■□□□ 1.19
TRAPPC12-220ENST00000482645 CLIC4Q9Y696 253 aa22.48■■□□□ 1.19
TRAPPC12-220ENST00000482645 PSMD10O75832 226 aa22.47■■□□□ 1.19
TRAPPC12-220ENST00000482645 MMP3P08254 477 aa22.47■■□□□ 1.19
TRAPPC12-220ENST00000482645 CRISPLD2Q9H0B8 497 aa22.47■■□□□ 1.19
TRAPPC12-220ENST00000482645 CFAP45Q9UL16 551 aa22.47■■□□□ 1.19
TRAPPC12-220ENST00000482645 SAMM50Q9Y512 469 aa22.47■■□□□ 1.19
TRAPPC12-220ENST00000482645 KBTBD13C9JR72 458 aa22.47■■□□□ 1.19
TRAPPC12-220ENST00000482645 CTAGE5O15320 804 aa22.47■■□□□ 1.19
TRAPPC12-220ENST00000482645 MYL3P08590 195 aa22.47■■□□□ 1.19
TRAPPC12-220ENST00000482645 KCNA10Q16322 511 aa22.47■■□□□ 1.19
TRAPPC12-220ENST00000482645 ATL3Q6DD88 541 aa22.47■■□□□ 1.19
TRAPPC12-220ENST00000482645 CLEC17AQ6ZS10 378 aa22.47■■□□□ 1.19
TRAPPC12-220ENST00000482645 MTMR9Q96QG7 549 aa22.47■■□□□ 1.19
TRAPPC12-220ENST00000482645 GPR20Q99678 358 aa22.47■■□□□ 1.19
TRAPPC12-220ENST00000482645 UNC45AQ9H3U1 944 aa22.47■■□□□ 1.19
TRAPPC12-220ENST00000482645 TTC12Q9H892 705 aaPredicted RBP22.47■■□□□ 1.19
TRAPPC12-220ENST00000482645 CEP131Q9UPN4 1083 aa22.47■■□□□ 1.19
TRAPPC12-220ENST00000482645 A6NJR5 290 aa22.46■■□□□ 1.19
TRAPPC12-220ENST00000482645 ZEB2O60315 1214 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 972.4 ms