RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 FGFBP2Q9BYJ0 223 aa16.48■□□□□ 0.23
ATG4B-220ENST00000482507 GPCPD1Q9NPB8 672 aa16.48■□□□□ 0.23
ATG4B-220ENST00000482507 MED4Q9NPJ6 270 aa16.48■□□□□ 0.23
ATG4B-220ENST00000482507 EHD2Q9NZN4 543 aa16.48■□□□□ 0.23
ATG4B-220ENST00000482507 SUGT1Q9Y2Z0 365 aa16.48■□□□□ 0.23
ATG4B-220ENST00000482507 GJA3Q9Y6H8 435 aa16.48■□□□□ 0.23
ATG4B-220ENST00000482507 LCA5LO95447 670 aa16.48■□□□□ 0.23
ATG4B-220ENST00000482507 AKR1B1P15121 316 aa16.48■□□□□ 0.23
ATG4B-220ENST00000482507 TMEM119Q4V9L6 283 aa16.48■□□□□ 0.23
ATG4B-220ENST00000482507 SNX29Q8TEQ0 813 aa16.48■□□□□ 0.23
ATG4B-220ENST00000482507 AGPSO00116 658 aa16.47■□□□□ 0.23
ATG4B-220ENST00000482507 KCNMA1Q12791 1236 aa16.47■□□□□ 0.23
ATG4B-220ENST00000482507 NFRKBQ6P4R8 1299 aa16.47■□□□□ 0.23
ATG4B-220ENST00000482507 SLF2Q8IX21 1173 aa16.47■□□□□ 0.23
ATG4B-220ENST00000482507 ANKRD13CQ8N6S4 541 aa16.47■□□□□ 0.23
ATG4B-220ENST00000482507 HAS1Q92839 578 aa16.47■□□□□ 0.23
ATG4B-220ENST00000482507 PRMT6Q96LA8 375 aaPredicted RBP16.47■□□□□ 0.23
ATG4B-220ENST00000482507 UIMC1Q96RL1 719 aa16.47■□□□□ 0.23
ATG4B-220ENST00000482507 TSGA10Q9BZW7 698 aa16.47■□□□□ 0.23
ATG4B-220ENST00000482507 VPS33BQ9H267 617 aa16.47■□□□□ 0.23
ATG4B-220ENST00000482507 JRKLQ9Y4A0 524 aa16.47■□□□□ 0.23
ATG4B-220ENST00000482507 SOCS7O14512 581 aa16.47■□□□□ 0.23
ATG4B-220ENST00000482507 TNNI2P48788 182 aa16.47■□□□□ 0.23
ATG4B-220ENST00000482507 NFIAQ12857 509 aa16.47■□□□□ 0.23
ATG4B-220ENST00000482507 ASTE1Q2TB18 679 aaPredicted RBP16.47■□□□□ 0.23
ATG4B-220ENST00000482507 CIAPIN1Q6FI81 312 aa16.47■□□□□ 0.23
ATG4B-220ENST00000482507 CDC42EP5Q6NZY7 148 aa16.47■□□□□ 0.23
ATG4B-220ENST00000482507 DNAJC19Q96DA6 116 aa16.47■□□□□ 0.23
ATG4B-220ENST00000482507 CDK5RAP3Q96JB5 506 aa16.47■□□□□ 0.23
ATG4B-220ENST00000482507 PSMB7Q99436 277 aa16.47■□□□□ 0.23
ATG4B-220ENST00000482507 SELENOOQ9BVL4 669 aa16.47■□□□□ 0.23
ATG4B-220ENST00000482507 JMJD4Q9H9V9 463 aa16.47■□□□□ 0.23
ATG4B-220ENST00000482507 DMGDHQ9UI17 866 aaKnown RBP16.47■□□□□ 0.23
ATG4B-220ENST00000482507 SCAF8Q9UPN6 1271 aaKnown RBP16.47■□□□□ 0.23
ATG4B-220ENST00000482507 NCK2O43639 380 aa16.46■□□□□ 0.23
ATG4B-220ENST00000482507 SLURP2P0DP57 97 aa16.46■□□□□ 0.23
ATG4B-220ENST00000482507 SNHG28P0DPA3 235 aa16.46■□□□□ 0.23
ATG4B-220ENST00000482507 CXCR5P32302 372 aa16.46■□□□□ 0.23
ATG4B-220ENST00000482507 GABPAQ06546 454 aa16.46■□□□□ 0.23
ATG4B-220ENST00000482507 PDIA5Q14554 519 aa16.46■□□□□ 0.23
ATG4B-220ENST00000482507 HGSNATQ68CP4 663 aa16.46■□□□□ 0.23
ATG4B-220ENST00000482507 TTBK2Q6IQ55 1244 aa16.46■□□□□ 0.23
ATG4B-220ENST00000482507 TRIM58Q8NG06 486 aa16.46■□□□□ 0.23
ATG4B-220ENST00000482507 GMLQ99445 158 aa16.46■□□□□ 0.23
ATG4B-220ENST00000482507 TDRD3Q9H7E2 651 aaKnown RBP16.46■□□□□ 0.23
ATG4B-220ENST00000482507 DDX4Q9NQI0 724 aaKnown RBP16.46■□□□□ 0.23
ATG4B-220ENST00000482507 PLIN4Q96Q06 1357 aa16.46■□□□□ 0.23
ATG4B-220ENST00000482507 IGKV6D-41A0A0C4DH26 115 aa16.46■□□□□ 0.23
ATG4B-220ENST00000482507 PLCG2P16885 1265 aa16.46■□□□□ 0.23
ATG4B-220ENST00000482507 GGCXP38435 758 aa16.46■□□□□ 0.23
ATG4B-220ENST00000482507 APBA1Q02410 837 aa16.46■□□□□ 0.23
ATG4B-220ENST00000482507 LRRC63Q05C16 580 aa16.46■□□□□ 0.23
ATG4B-220ENST00000482507 GFPT1Q06210 699 aaPredicted RBP16.46■□□□□ 0.23
ATG4B-220ENST00000482507 TMEM266Q2M3C6 531 aa16.46■□□□□ 0.23
ATG4B-220ENST00000482507 ZCWPW2Q504Y3 356 aa16.46■□□□□ 0.23
ATG4B-220ENST00000482507 RBM26Q5T8P6 1007 aaKnown RBP16.46■□□□□ 0.23
ATG4B-220ENST00000482507 HHIPL2Q6UWX4 724 aa16.46■□□□□ 0.23
ATG4B-220ENST00000482507 CERS3Q8IU89 383 aa16.46■□□□□ 0.23
ATG4B-220ENST00000482507 ZFPM1Q8IX07 1006 aa16.46■□□□□ 0.23
ATG4B-220ENST00000482507 LRRC1Q9BTT6 524 aa16.46■□□□□ 0.23
ATG4B-220ENST00000482507 ABCB11O95342 1321 aa16.45■□□□□ 0.22
ATG4B-220ENST00000482507 AKR1B10O60218 316 aa16.45■□□□□ 0.22
ATG4B-220ENST00000482507 USO1O60763 962 aaKnown RBP16.45■□□□□ 0.22
ATG4B-220ENST00000482507 TACC1O75410 805 aa16.45■□□□□ 0.22
ATG4B-220ENST00000482507 MCM3P25205 808 aa16.45■□□□□ 0.22
ATG4B-220ENST00000482507 TCP10Q12799 353 aa16.45■□□□□ 0.22
ATG4B-220ENST00000482507 COASYQ13057 564 aa16.45■□□□□ 0.22
ATG4B-220ENST00000482507 MAP9Q49MG5 647 aa16.45■□□□□ 0.22
ATG4B-220ENST00000482507 PDXDC1Q6P996 788 aa16.45■□□□□ 0.22
ATG4B-220ENST00000482507 ZNF572Q7Z3I7 529 aaPredicted RBP16.45■□□□□ 0.22
ATG4B-220ENST00000482507 MMGT1Q8N4V1 131 aa16.45■□□□□ 0.22
ATG4B-220ENST00000482507 MTMR8Q96EF0 704 aa16.45■□□□□ 0.22
ATG4B-220ENST00000482507 ZFP91Q96JP5 570 aaPredicted RBP16.45■□□□□ 0.22
ATG4B-220ENST00000482507 OSBPL9Q96SU4 736 aa16.45■□□□□ 0.22
ATG4B-220ENST00000482507 ACBD3Q9H3P7 528 aa16.45■□□□□ 0.22
ATG4B-220ENST00000482507 ZNF541Q9H0D2 1346 aa16.45■□□□□ 0.22
ATG4B-220ENST00000482507 TLR2O60603 784 aa16.45■□□□□ 0.22
ATG4B-220ENST00000482507 NOL4O94818 638 aa16.45■□□□□ 0.22
ATG4B-220ENST00000482507 EGFRP00533 1210 aa16.45■□□□□ 0.22
ATG4B-220ENST00000482507 CLK2P49760 499 aaKnown RBP16.45■□□□□ 0.22
ATG4B-220ENST00000482507 FKBP1AP62942 108 aaKnown RBP16.45■□□□□ 0.22
ATG4B-220ENST00000482507 GPR162Q16538 588 aa16.45■□□□□ 0.22
ATG4B-220ENST00000482507 ASPRV1Q53RT3 343 aa16.45■□□□□ 0.22
ATG4B-220ENST00000482507 KRT79Q5XKE5 535 aa16.45■□□□□ 0.22
ATG4B-220ENST00000482507 CCDC84Q86UT8 332 aaPredicted RBP16.45■□□□□ 0.22
ATG4B-220ENST00000482507 ADGRF4Q8IZF3 695 aa16.45■□□□□ 0.22
ATG4B-220ENST00000482507 SPATA4Q8NEY3 305 aa16.45■□□□□ 0.22
ATG4B-220ENST00000482507 AENQ8WTP8 325 aaKnown RBP16.45■□□□□ 0.22
ATG4B-220ENST00000482507 IQCDQ96DY2 449 aa16.45■□□□□ 0.22
ATG4B-220ENST00000482507 ZDHHC15Q96MV8 337 aa16.45■□□□□ 0.22
ATG4B-220ENST00000482507 DEF6Q9H4E7 631 aa16.45■□□□□ 0.22
ATG4B-220ENST00000482507 KANSL2Q9H9L4 492 aa16.45■□□□□ 0.22
ATG4B-220ENST00000482507 LTBP3Q9NS15 1303 aa16.44■□□□□ 0.22
ATG4B-220ENST00000482507 hCG_1984214I3L0E3 225 aa16.44■□□□□ 0.22
ATG4B-220ENST00000482507 RPS6KA5O75582 802 aa16.44■□□□□ 0.22
ATG4B-220ENST00000482507 SLC16A2P36021 539 aa16.44■□□□□ 0.22
ATG4B-220ENST00000482507 SLC1A4P43007 532 aa16.44■□□□□ 0.22
ATG4B-220ENST00000482507 MAGEA1P43355 309 aa16.44■□□□□ 0.22
ATG4B-220ENST00000482507 LRRC31Q6UY01 552 aa16.44■□□□□ 0.22
ATG4B-220ENST00000482507 OGFOD1Q8N543 542 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms