RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 MYH7BA7E2Y1 1941 aa17.96■□□□□ 0.47
COL16A1-212ENST00000482478 SMCO2A6NFE2 343 aa17.95■□□□□ 0.46
COL16A1-212ENST00000482478 HAS3O00219 553 aa17.95■□□□□ 0.46
COL16A1-212ENST00000482478 SCG2P13521 617 aa17.95■□□□□ 0.46
COL16A1-212ENST00000482478 ADD1P35611 737 aaKnown RBP17.95■□□□□ 0.46
COL16A1-212ENST00000482478 AP3B2Q13367 1082 aa17.95■□□□□ 0.46
COL16A1-212ENST00000482478 PFKFB3Q16875 520 aaPredicted RBP17.95■□□□□ 0.46
COL16A1-212ENST00000482478 LRRC8DQ7L1W4 858 aa17.95■□□□□ 0.46
COL16A1-212ENST00000482478 CCDC12Q8WUD4 166 aaPredicted RBP17.95■□□□□ 0.46
COL16A1-212ENST00000482478 GPR20Q99678 358 aa17.95■□□□□ 0.46
COL16A1-212ENST00000482478 PBX4Q9BYU1 374 aa17.95■□□□□ 0.46
COL16A1-212ENST00000482478 UPF3BQ9BZI7 483 aaKnown RBP17.95■□□□□ 0.46
COL16A1-212ENST00000482478 GLT8D2Q9H1C3 349 aa17.95■□□□□ 0.46
COL16A1-212ENST00000482478 FAM217BQ9NTX9 383 aaPredicted RBP17.95■□□□□ 0.46
COL16A1-212ENST00000482478 CYP46A1Q9Y6A2 500 aa17.95■□□□□ 0.46
COL16A1-212ENST00000482478 SCN5AQ14524 2016 aa17.94■□□□□ 0.46
COL16A1-212ENST00000482478 C17orf102A2RUQ5 167 aa17.94■□□□□ 0.46
COL16A1-212ENST00000482478 GRXCR1A8MXD5 290 aa17.94■□□□□ 0.46
COL16A1-212ENST00000482478 H3BRB1 525 aa17.94■□□□□ 0.46
COL16A1-212ENST00000482478 PPFIA3O75145 1194 aa17.94■□□□□ 0.46
COL16A1-212ENST00000482478 IQCF3P0C7M6 154 aa17.94■□□□□ 0.46
COL16A1-212ENST00000482478 SMIM10L2AP0DMW4 78 aa17.94■□□□□ 0.46
COL16A1-212ENST00000482478 SMIM10L2BP0DMW5 78 aa17.94■□□□□ 0.46
COL16A1-212ENST00000482478 SELPP16109 830 aa17.94■□□□□ 0.46
COL16A1-212ENST00000482478 ITGB5P18084 799 aa17.94■□□□□ 0.46
COL16A1-212ENST00000482478 RAB30Q15771 203 aa17.94■□□□□ 0.46
COL16A1-212ENST00000482478 RASIP1Q5U651 963 aa17.94■□□□□ 0.46
COL16A1-212ENST00000482478 RUFY3Q7L099 469 aa17.94■□□□□ 0.46
COL16A1-212ENST00000482478 DHX38Q92620 1227 aaKnown RBP17.94■□□□□ 0.46
COL16A1-212ENST00000482478 PHKBQ93100 1093 aa17.94■□□□□ 0.46
COL16A1-212ENST00000482478 SENP7Q9BQF6 1050 aa17.94■□□□□ 0.46
COL16A1-212ENST00000482478 C16orf70Q9BSU1 422 aa17.94■□□□□ 0.46
COL16A1-212ENST00000482478 SLC26A6Q9BXS9 759 aa17.94■□□□□ 0.46
COL16A1-212ENST00000482478 TTYH1Q9H313 450 aaPredicted RBP17.94■□□□□ 0.46
COL16A1-212ENST00000482478 TUT1Q9H6E5 874 aaKnown RBP17.94■□□□□ 0.46
COL16A1-212ENST00000482478 BCAS3Q9H6U6 928 aa17.94■□□□□ 0.46
COL16A1-212ENST00000482478 SLC4A7Q9Y6M7 1214 aa17.94■□□□□ 0.46
COL16A1-212ENST00000482478 LAMA2P24043 3122 aaKnown RBP17.94■□□□□ 0.46
COL16A1-212ENST00000482478 FOSP01100 380 aaPredicted RBP17.93■□□□□ 0.46
COL16A1-212ENST00000482478 FOSL2P15408 326 aa17.93■□□□□ 0.46
COL16A1-212ENST00000482478 KCNA2P16389 499 aa17.93■□□□□ 0.46
COL16A1-212ENST00000482478 PBX2P40425 430 aa17.93■□□□□ 0.46
COL16A1-212ENST00000482478 CCT2P78371 535 aaKnown RBP17.93■□□□□ 0.46
COL16A1-212ENST00000482478 CCDC148Q8NFR7 591 aa17.93■□□□□ 0.46
COL16A1-212ENST00000482478 CTAGE1Q96RT6 745 aa17.93■□□□□ 0.46
COL16A1-212ENST00000482478 USP26Q9BXU7 913 aa17.93■□□□□ 0.46
COL16A1-212ENST00000482478 NCOA5Q9HCD5 579 aaKnown RBP17.93■□□□□ 0.46
COL16A1-212ENST00000482478 JPH1Q9HDC5 661 aaPredicted RBP17.93■□□□□ 0.46
COL16A1-212ENST00000482478 TMEM260Q9NX78 707 aa17.93■□□□□ 0.46
COL16A1-212ENST00000482478 MSRAQ9UJ68 235 aa17.93■□□□□ 0.46
COL16A1-212ENST00000482478 UBIAD1Q9Y5Z9 338 aa17.93■□□□□ 0.46
COL16A1-212ENST00000482478 CPLX1O14810 134 aa17.92■□□□□ 0.46
COL16A1-212ENST00000482478 ATP2A2P16615 1042 aaKnown RBP17.92■□□□□ 0.46
COL16A1-212ENST00000482478 TCF7P36402 384 aaPredicted RBP17.92■□□□□ 0.46
COL16A1-212ENST00000482478 ZNF200P98182 395 aaPredicted RBP17.92■□□□□ 0.46
COL16A1-212ENST00000482478 PTK7Q13308 1070 aa17.92■□□□□ 0.46
COL16A1-212ENST00000482478 JAKMIP3Q5VZ66 844 aa17.92■□□□□ 0.46
COL16A1-212ENST00000482478 TEX2Q8IWB9 1127 aa17.92■□□□□ 0.46
COL16A1-212ENST00000482478 REXO1Q8N1G1 1221 aaKnown RBP17.92■□□□□ 0.46
COL16A1-212ENST00000482478 FBXL16Q8N461 479 aa17.92■□□□□ 0.46
COL16A1-212ENST00000482478 ATP6V0A1Q93050 837 aa17.92■□□□□ 0.46
COL16A1-212ENST00000482478 CDX2Q99626 313 aaPredicted RBP17.92■□□□□ 0.46
COL16A1-212ENST00000482478 AGXT2Q9BYV1 514 aa17.92■□□□□ 0.46
COL16A1-212ENST00000482478 SEMA6BQ9H3T3 888 aa17.92■□□□□ 0.46
COL16A1-212ENST00000482478 ZSWIM6Q9HCJ5 1215 aa17.92■□□□□ 0.46
COL16A1-212ENST00000482478 C6orf50Q9HD87 102 aa17.92■□□□□ 0.46
COL16A1-212ENST00000482478 JADE2Q9NQC1 790 aa17.92■□□□□ 0.46
COL16A1-212ENST00000482478 CKBP12277 381 aa17.91■□□□□ 0.46
COL16A1-212ENST00000482478 MARK3P27448 753 aa17.91■□□□□ 0.46
COL16A1-212ENST00000482478 ZNF76P36508 570 aa17.91■□□□□ 0.46
COL16A1-212ENST00000482478 THPOP40225 353 aa17.91■□□□□ 0.46
COL16A1-212ENST00000482478 KCNJ6P48051 423 aa17.91■□□□□ 0.46
COL16A1-212ENST00000482478 TOB2Q14106 344 aaPredicted RBP17.91■□□□□ 0.46
COL16A1-212ENST00000482478 TRIM22Q8IYM9 498 aa17.91■□□□□ 0.46
COL16A1-212ENST00000482478 MYLIPQ8WY64 445 aa17.91■□□□□ 0.46
COL16A1-212ENST00000482478 SDF4Q9BRK5 362 aa17.91■□□□□ 0.46
COL16A1-212ENST00000482478 RNF26Q9BY78 433 aaPredicted RBP17.91■□□□□ 0.46
COL16A1-212ENST00000482478 TELO2Q9Y4R8 837 aa17.91■□□□□ 0.46
COL16A1-212ENST00000482478 ESYT2A0FGR8 921 aa17.9■□□□□ 0.46
COL16A1-212ENST00000482478 ATP9AO75110 1047 aa17.9■□□□□ 0.46
COL16A1-212ENST00000482478 CTSHP09668 335 aa17.9■□□□□ 0.46
COL16A1-212ENST00000482478 SREBF1P36956 1147 aa17.9■□□□□ 0.46
COL16A1-212ENST00000482478 RABGGTBP53611 331 aa17.9■□□□□ 0.46
COL16A1-212ENST00000482478 ARHGAP4P98171 946 aa17.9■□□□□ 0.46
COL16A1-212ENST00000482478 RBL2Q08999 1139 aa17.9■□□□□ 0.46
COL16A1-212ENST00000482478 STK3Q13188 491 aa17.9■□□□□ 0.46
COL16A1-212ENST00000482478 GLG1Q92896 1179 aa17.9■□□□□ 0.46
COL16A1-212ENST00000482478 WNT8BQ93098 351 aa17.9■□□□□ 0.46
COL16A1-212ENST00000482478 SLC9A7Q96T83 725 aa17.9■□□□□ 0.46
COL16A1-212ENST00000482478 MXRA8Q9BRK3 442 aa17.9■□□□□ 0.46
COL16A1-212ENST00000482478 NKX2-4Q9H2Z4 354 aa17.9■□□□□ 0.46
COL16A1-212ENST00000482478 ZNF576Q9H609 170 aa17.9■□□□□ 0.46
COL16A1-212ENST00000482478 KCNH7Q9NS40 1196 aa17.9■□□□□ 0.46
COL16A1-212ENST00000482478 PDRG1Q9NUG6 133 aa17.9■□□□□ 0.46
COL16A1-212ENST00000482478 GBF1Q92538 1859 aa17.9■□□□□ 0.46
COL16A1-212ENST00000482478 PRPF3O43395 683 aaKnown RBP17.89■□□□□ 0.45
COL16A1-212ENST00000482478 BAIAP3O94812 1187 aa17.89■□□□□ 0.45
COL16A1-212ENST00000482478 PARNO95453 639 aaKnown RBP17.89■□□□□ 0.45
COL16A1-212ENST00000482478 GNAT1P11488 350 aa17.89■□□□□ 0.45
COL16A1-212ENST00000482478 GNA11P29992 359 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms