RNA–Protein interactions for RNA: ENST00000482098.1

LINC00888-203, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 794 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-203ENST00000482098 KLHL3Q9UH77 587 aa9.15□□□□□ -0.94
LINC00888-203ENST00000482098 RAG1P15918 1043 aa9.14□□□□□ -0.95
LINC00888-203ENST00000482098 FGFR3P22607 806 aa9.14□□□□□ -0.95
LINC00888-203ENST00000482098 CDC27P30260 824 aa9.14□□□□□ -0.95
LINC00888-203ENST00000482098 GSTM4Q03013 218 aa9.14□□□□□ -0.95
LINC00888-203ENST00000482098 UBE4AQ14139 1066 aa9.14□□□□□ -0.95
LINC00888-203ENST00000482098 HLTFQ14527 1009 aaKnown RBP eCLIP9.14□□□□□ -0.95
LINC00888-203ENST00000482098 INPP5AQ14642 412 aa9.14□□□□□ -0.95
LINC00888-203ENST00000482098 MAP9Q49MG5 647 aa9.14□□□□□ -0.95
LINC00888-203ENST00000482098 LRFN4Q6PJG9 635 aa9.14□□□□□ -0.95
LINC00888-203ENST00000482098 APOBEC3FQ8IUX4 373 aaKnown RBP9.14□□□□□ -0.95
LINC00888-203ENST00000482098 CACTIN-AS1Q8N1I8 211 aa9.14□□□□□ -0.95
LINC00888-203ENST00000482098 CORO1BQ9BR76 489 aa9.14□□□□□ -0.95
LINC00888-203ENST00000482098 SMG9Q9H0W8 520 aaKnown RBP9.14□□□□□ -0.95
LINC00888-203ENST00000482098 SOX17Q9H6I2 414 aaPredicted RBP9.14□□□□□ -0.95
LINC00888-203ENST00000482098 GGA1Q9UJY5 639 aa9.14□□□□□ -0.95
LINC00888-203ENST00000482098 MYO3BQ8WXR4 1341 aa9.13□□□□□ -0.95
LINC00888-203ENST00000482098 A0A1W2PQU0 124 aa9.13□□□□□ -0.95
LINC00888-203ENST00000482098 IGF2BP3O00425 579 aaKnown RBP eCLIP9.13□□□□□ -0.95
LINC00888-203ENST00000482098 SOX1O00570 391 aaPredicted RBP9.13□□□□□ -0.95
LINC00888-203ENST00000482098 WNT10BO00744 389 aa9.13□□□□□ -0.95
LINC00888-203ENST00000482098 ARL4DP49703 201 aa9.13□□□□□ -0.95
LINC00888-203ENST00000482098 SLC4A8Q2Y0W8 1093 aa9.13□□□□□ -0.95
LINC00888-203ENST00000482098 NBPF9Q3BBW0 867 aa9.13□□□□□ -0.95
LINC00888-203ENST00000482098 SLC9C1Q4G0N8 1177 aa9.13□□□□□ -0.95
LINC00888-203ENST00000482098 TRIM46Q7Z4K8 759 aa9.13□□□□□ -0.95
LINC00888-203ENST00000482098 NECAB2Q7Z6G3 386 aa9.13□□□□□ -0.95
LINC00888-203ENST00000482098 SYT9Q86SS6 491 aa9.13□□□□□ -0.95
LINC00888-203ENST00000482098 CLUHP3Q96NS8 147 aa9.13□□□□□ -0.95
LINC00888-203ENST00000482098 APBA2Q99767 749 aa9.13□□□□□ -0.95
LINC00888-203ENST00000482098 AARSD1Q9BTE6 412 aaKnown RBP9.13□□□□□ -0.95
LINC00888-203ENST00000482098 THUMPD2Q9BTF0 503 aaKnown RBP9.13□□□□□ -0.95
LINC00888-203ENST00000482098 BABAM1Q9NWV8 329 aa9.13□□□□□ -0.95
LINC00888-203ENST00000482098 TRIM33Q9UPN9 1127 aa9.13□□□□□ -0.95
LINC00888-203ENST00000482098 DDX60Q8IY21 1712 aaKnown RBP9.13□□□□□ -0.95
LINC00888-203ENST00000482098 ANKRD34BA5PLL1 514 aa9.12□□□□□ -0.95
LINC00888-203ENST00000482098 H3BRJ5 948 aa9.12□□□□□ -0.95
LINC00888-203ENST00000482098 SIN3BO75182 1162 aa9.12□□□□□ -0.95
LINC00888-203ENST00000482098 KATNA1O75449 491 aa9.12□□□□□ -0.95
LINC00888-203ENST00000482098 UFL1O94874 794 aa9.12□□□□□ -0.95
LINC00888-203ENST00000482098 SELPP16109 830 aa9.12□□□□□ -0.95
LINC00888-203ENST00000482098 MCL1Q07820 350 aa9.12□□□□□ -0.95
LINC00888-203ENST00000482098 TRIM28Q13263 835 aaKnown RBP9.12□□□□□ -0.95
LINC00888-203ENST00000482098 CRHR2Q13324 411 aa9.12□□□□□ -0.95
LINC00888-203ENST00000482098 PRAMEF18Q5VWM3 479 aa9.12□□□□□ -0.95
LINC00888-203ENST00000482098 COPS6Q7L5N1 327 aa9.12□□□□□ -0.95
LINC00888-203ENST00000482098 CD99L2Q8TCZ2 262 aa9.12□□□□□ -0.95
LINC00888-203ENST00000482098 LEO1Q8WVC0 666 aaPredicted RBP9.12□□□□□ -0.95
LINC00888-203ENST00000482098 DDX1Q92499 740 aaKnown RBP9.12□□□□□ -0.95
LINC00888-203ENST00000482098 ARHGEF4Q9NR80 690 aa9.12□□□□□ -0.95
LINC00888-203ENST00000482098 ADAM30Q9UKF2 790 aa9.12□□□□□ -0.95
LINC00888-203ENST00000482098 COL1A1P02452 1464 aaPredicted RBP9.12□□□□□ -0.95
LINC00888-203ENST00000482098 SLC35F4A4IF30 521 aa9.11□□□□□ -0.95
LINC00888-203ENST00000482098 PGRP06401 933 aa9.11□□□□□ -0.95
LINC00888-203ENST00000482098 CAPN2P17655 700 aa9.11□□□□□ -0.95
LINC00888-203ENST00000482098 PRMT2P55345 433 aa9.11□□□□□ -0.95
LINC00888-203ENST00000482098 SUMO1P63165 101 aaKnown RBP9.11□□□□□ -0.95
LINC00888-203ENST00000482098 CALD1Q05682 793 aaKnown RBP9.11□□□□□ -0.95
LINC00888-203ENST00000482098 STRIP1Q5VSL9 837 aa9.11□□□□□ -0.95
LINC00888-203ENST00000482098 RNF219Q5W0B1 726 aaPredicted RBP9.11□□□□□ -0.95
LINC00888-203ENST00000482098 CHPFQ8IZ52 775 aa9.11□□□□□ -0.95
LINC00888-203ENST00000482098 MYO1HQ8N1T3 1032 aa9.11□□□□□ -0.95
LINC00888-203ENST00000482098 WDR66Q8TBY9 1149 aa9.11□□□□□ -0.95
LINC00888-203ENST00000482098 WNK4Q96J92 1243 aa9.11□□□□□ -0.95
LINC00888-203ENST00000482098 ASPSCR1Q9BZE9 553 aa9.11□□□□□ -0.95
LINC00888-203ENST00000482098 SLC5A4Q9NY91 659 aa9.11□□□□□ -0.95
LINC00888-203ENST00000482098 SLC6A14Q9UN76 642 aa9.11□□□□□ -0.95
LINC00888-203ENST00000482098 ANGEL1Q9UNK9 670 aaKnown RBP9.11□□□□□ -0.95
LINC00888-203ENST00000482098 PPP2R3BQ9Y5P8 575 aa9.11□□□□□ -0.95
LINC00888-203ENST00000482098 NR2E3Q9Y5X4 410 aa9.11□□□□□ -0.95
LINC00888-203ENST00000482098 COMMD10Q9Y6G5 202 aa9.11□□□□□ -0.95
LINC00888-203ENST00000482098 XDHP47989 1333 aa9.1□□□□□ -0.95
LINC00888-203ENST00000482098 IL16Q14005 1332 aa9.1□□□□□ -0.95
LINC00888-203ENST00000482098 CREB3O43889 395 aa9.1□□□□□ -0.95
LINC00888-203ENST00000482098 DNAJA2O60884 412 aa9.1□□□□□ -0.95
LINC00888-203ENST00000482098 EYA4O95677 639 aa9.1□□□□□ -0.95
LINC00888-203ENST00000482098 SCGB1D2O95969 90 aa9.1□□□□□ -0.95
LINC00888-203ENST00000482098 EPHA1P21709 976 aa9.1□□□□□ -0.95
LINC00888-203ENST00000482098 NEK2P51955 445 aa9.1□□□□□ -0.95
LINC00888-203ENST00000482098 PTSQ03393 145 aa9.1□□□□□ -0.95
LINC00888-203ENST00000482098 STRN3Q13033 797 aa9.1□□□□□ -0.95
LINC00888-203ENST00000482098 POU4F3Q15319 338 aa9.1□□□□□ -0.95
LINC00888-203ENST00000482098 PROSER3Q2NL68 480 aa9.1□□□□□ -0.95
LINC00888-203ENST00000482098 SUPT20HL1Q3ZLR7 823 aa9.1□□□□□ -0.95
LINC00888-203ENST00000482098 DACT2Q5SW24 774 aa9.1□□□□□ -0.95
LINC00888-203ENST00000482098 CYFIP1Q7L576 1253 aa9.1□□□□□ -0.95
LINC00888-203ENST00000482098 WDR63Q8IWG1 891 aa9.1□□□□□ -0.95
LINC00888-203ENST00000482098 XAGE3Q8WTP9 111 aa9.1□□□□□ -0.95
LINC00888-203ENST00000482098 SLC7A3Q8WY07 619 aa9.1□□□□□ -0.95
LINC00888-203ENST00000482098 ZBED3Q96IU2 234 aaPredicted RBP9.1□□□□□ -0.95
LINC00888-203ENST00000482098 ISCA1Q9BUE6 129 aa9.1□□□□□ -0.95
LINC00888-203ENST00000482098 HTATIP2Q9BUP3 242 aa9.1□□□□□ -0.95
LINC00888-203ENST00000482098 FRRS1LQ9P0K9 344 aa9.1□□□□□ -0.95
LINC00888-203ENST00000482098 SFMBT1Q9UHJ3 866 aa9.1□□□□□ -0.95
LINC00888-203ENST00000482098 SCN9AQ15858 1988 aa9.1□□□□□ -0.95
LINC00888-203ENST00000482098 E2F8A0AVK6 867 aa9.09□□□□□ -0.95
LINC00888-203ENST00000482098 NPTXRO95502 500 aa9.09□□□□□ -0.95
LINC00888-203ENST00000482098 MYL1P05976 194 aa9.09□□□□□ -0.95
LINC00888-203ENST00000482098 SDSP20132 328 aa9.09□□□□□ -0.95
LINC00888-203ENST00000482098 RAB27AP51159 221 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms