RNA–Protein interactions for RNA: ENST00000481804.5

CCDC78-211, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,248 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-211ENST00000481804 PACSIN1Q9BY11 444 aa15.77■□□□□ 0.11
CCDC78-211ENST00000481804 EDEM3Q9BZQ6 932 aa15.77■□□□□ 0.11
CCDC78-211ENST00000481804 RIC8AQ9NPQ8 531 aa15.77■□□□□ 0.11
CCDC78-211ENST00000481804 A0A087X0T9 212 aa15.76■□□□□ 0.11
CCDC78-211ENST00000481804 GRID2IPA4D2P6 1211 aa15.76■□□□□ 0.11
CCDC78-211ENST00000481804 FAM228BP0C875 321 aa15.76■□□□□ 0.11
CCDC78-211ENST00000481804 TNNI2P48788 182 aa15.76■□□□□ 0.11
CCDC78-211ENST00000481804 SH3RF3Q8TEJ3 882 aaPredicted RBP15.76■□□□□ 0.11
CCDC78-211ENST00000481804 SPAG5Q96R06 1193 aa15.76■□□□□ 0.11
CCDC78-211ENST00000481804 LRRC27Q9C0I9 530 aa15.76■□□□□ 0.11
CCDC78-211ENST00000481804 DNAJC5Q9H3Z4 198 aa15.76■□□□□ 0.11
CCDC78-211ENST00000481804 GOLPH3Q9H4A6 298 aa15.76■□□□□ 0.11
CCDC78-211ENST00000481804 TAF1DQ9H5J8 278 aaPredicted RBP15.76■□□□□ 0.11
CCDC78-211ENST00000481804 LOC102724428A0A0B4J2F2 783 aa15.76■□□□□ 0.11
CCDC78-211ENST00000481804 PALM3A6NDB9 673 aaPredicted RBP15.76■□□□□ 0.11
CCDC78-211ENST00000481804 LDHBP07195 334 aaKnown RBP15.76■□□□□ 0.11
CCDC78-211ENST00000481804 SIK1P57059 783 aa15.76■□□□□ 0.11
CCDC78-211ENST00000481804 KCNMA1Q12791 1236 aa15.76■□□□□ 0.11
CCDC78-211ENST00000481804 SLC18A3Q16572 532 aa15.76■□□□□ 0.11
CCDC78-211ENST00000481804 ASTE1Q2TB18 679 aaPredicted RBP15.76■□□□□ 0.11
CCDC78-211ENST00000481804 CCDC24Q8N4L8 307 aa15.76■□□□□ 0.11
CCDC78-211ENST00000481804 LRRC45Q96CN5 670 aa15.76■□□□□ 0.11
CCDC78-211ENST00000481804 AP1M1Q9BXS5 423 aa15.76■□□□□ 0.11
CCDC78-211ENST00000481804 ABCB11O95342 1321 aa15.76■□□□□ 0.11
CCDC78-211ENST00000481804 CACNA1SQ13698 1873 aa15.76■□□□□ 0.11
CCDC78-211ENST00000481804 FSBPO95073 299 aa15.75■□□□□ 0.11
CCDC78-211ENST00000481804 TDP2O95551 362 aa15.75■□□□□ 0.11
CCDC78-211ENST00000481804 KRT18P05783 430 aaKnown RBP15.75■□□□□ 0.11
CCDC78-211ENST00000481804 RPS8P62241 208 aaKnown RBP15.75■□□□□ 0.11
CCDC78-211ENST00000481804 DIXDC1Q155Q3 683 aa15.75■□□□□ 0.11
CCDC78-211ENST00000481804 FAM26FQ5R3K3 315 aa15.75■□□□□ 0.11
CCDC78-211ENST00000481804 SMIM5Q71RC9 77 aa15.75■□□□□ 0.11
CCDC78-211ENST00000481804 DDX42Q86XP3 938 aaKnown RBP eCLIP15.75■□□□□ 0.11
CCDC78-211ENST00000481804 RAD54LQ92698 747 aa15.75■□□□□ 0.11
CCDC78-211ENST00000481804 CASZ1Q86V15 1759 aa15.75■□□□□ 0.11
CCDC78-211ENST00000481804 BAG3O95817 575 aa15.75■□□□□ 0.11
CCDC78-211ENST00000481804 FAM107AO95990 144 aa15.75■□□□□ 0.11
CCDC78-211ENST00000481804 KCTD19Q17RG1 926 aaPredicted RBP15.75■□□□□ 0.11
CCDC78-211ENST00000481804 USP38Q8NB14 1042 aa15.75■□□□□ 0.11
CCDC78-211ENST00000481804 GIMAP7Q8NHV1 300 aa15.75■□□□□ 0.11
CCDC78-211ENST00000481804 PNMA5Q96PV4 448 aa15.75■□□□□ 0.11
CCDC78-211ENST00000481804 TLR2O60603 784 aa15.75■□□□□ 0.11
CCDC78-211ENST00000481804 KCNQ4P56696 695 aa15.75■□□□□ 0.11
CCDC78-211ENST00000481804 COBLL1Q53SF7 1204 aa15.75■□□□□ 0.11
CCDC78-211ENST00000481804 MEI1Q5TIA1 1274 aa15.75■□□□□ 0.11
CCDC78-211ENST00000481804 MREGQ8N565 214 aa15.75■□□□□ 0.11
CCDC78-211ENST00000481804 ZNF287Q9HBT7 754 aa15.75■□□□□ 0.11
CCDC78-211ENST00000481804 BACH1O14867 736 aa15.74■□□□□ 0.11
CCDC78-211ENST00000481804 PIK3R5Q8WYR1 880 aa15.74■□□□□ 0.11
CCDC78-211ENST00000481804 INPP4AQ96PE3 977 aaPredicted RBP15.74■□□□□ 0.11
CCDC78-211ENST00000481804 EYA3Q99504 573 aa15.74■□□□□ 0.11
CCDC78-211ENST00000481804 CD248Q9HCU0 757 aa15.74■□□□□ 0.11
CCDC78-211ENST00000481804 PANK4Q9NVE7 773 aa15.74■□□□□ 0.11
CCDC78-211ENST00000481804 SHANK3Q9BYB0 1731 aa15.74■□□□□ 0.11
CCDC78-211ENST00000481804 GOLGB1Q14789 3259 aaKnown RBP15.74■□□□□ 0.11
CCDC78-211ENST00000481804 CACNB1Q02641 598 aaPredicted RBP15.74■□□□□ 0.11
CCDC78-211ENST00000481804 RUFY4Q6ZNE9 571 aa15.74■□□□□ 0.11
CCDC78-211ENST00000481804 PROM2Q8N271 834 aa15.74■□□□□ 0.11
CCDC78-211ENST00000481804 CYFIP2Q96F07 1278 aa15.74■□□□□ 0.11
CCDC78-211ENST00000481804 SPZ1Q9BXG8 430 aa15.74■□□□□ 0.11
CCDC78-211ENST00000481804 SLC37A4O43826 429 aa15.73■□□□□ 0.11
CCDC78-211ENST00000481804 HSD17B3P37058 310 aa15.73■□□□□ 0.11
CCDC78-211ENST00000481804 IFFO1Q0D2I5 559 aa15.73■□□□□ 0.11
CCDC78-211ENST00000481804 COASYQ13057 564 aa15.73■□□□□ 0.11
CCDC78-211ENST00000481804 ITGB3BPQ13352 177 aaPredicted RBP15.73■□□□□ 0.11
CCDC78-211ENST00000481804 CEP57Q86XR8 500 aa15.73■□□□□ 0.11
CCDC78-211ENST00000481804 CD302Q8IX05 232 aa15.73■□□□□ 0.11
CCDC78-211ENST00000481804 CCDC13Q8IYE1 715 aa15.73■□□□□ 0.11
CCDC78-211ENST00000481804 COA7Q96BR5 231 aa15.73■□□□□ 0.11
CCDC78-211ENST00000481804 NUDT12Q9BQG2 462 aa15.73■□□□□ 0.11
CCDC78-211ENST00000481804 TMOD1P28289 359 aa15.73■□□□□ 0.11
CCDC78-211ENST00000481804 FNTAP49354 379 aa15.73■□□□□ 0.11
CCDC78-211ENST00000481804 ERVK-9P63128 1117 aa15.73■□□□□ 0.11
CCDC78-211ENST00000481804 PSMD2Q13200 908 aa15.73■□□□□ 0.11
CCDC78-211ENST00000481804 HERC4Q5GLZ8 1057 aaPredicted RBP15.73■□□□□ 0.11
CCDC78-211ENST00000481804 KCNK18Q7Z418 384 aa15.73■□□□□ 0.11
CCDC78-211ENST00000481804 DDX47Q9H0S4 455 aaKnown RBP15.73■□□□□ 0.11
CCDC78-211ENST00000481804 CXorf56Q9H5V9 222 aa15.73■□□□□ 0.11
CCDC78-211ENST00000481804 KLC4Q9NSK0 619 aa15.73■□□□□ 0.11
CCDC78-211ENST00000481804 FRMPD2Q68DX3 1309 aaPredicted RBP15.73■□□□□ 0.11
CCDC78-211ENST00000481804 ATXN2Q99700 1313 aaKnown RBP15.73■□□□□ 0.11
CCDC78-211ENST00000481804 HSPA9P38646 679 aaKnown RBP15.73■□□□□ 0.11
CCDC78-211ENST00000481804 ADCY7P51828 1080 aa15.73■□□□□ 0.11
CCDC78-211ENST00000481804 IFI16Q16666 785 aaKnown RBP15.73■□□□□ 0.11
CCDC78-211ENST00000481804 DNAAF5Q86Y56 855 aa15.73■□□□□ 0.11
CCDC78-211ENST00000481804 ANKS1AQ92625 1134 aa15.73■□□□□ 0.11
CCDC78-211ENST00000481804 TMBIM4Q9HC24 238 aa15.73■□□□□ 0.11
CCDC78-211ENST00000481804 PCDHGC5Q9Y5F6 944 aa15.73■□□□□ 0.11
CCDC78-211ENST00000481804 GMNCA6NCL1 334 aa15.72■□□□□ 0.11
CCDC78-211ENST00000481804 RBAK-RBAKDNI3L0D1 243 aa15.72■□□□□ 0.11
CCDC78-211ENST00000481804 KRIT1O00522 736 aa15.72■□□□□ 0.11
CCDC78-211ENST00000481804 ITPK1Q13572 414 aa15.72■□□□□ 0.11
CCDC78-211ENST00000481804 SF3B3Q15393 1217 aaKnown RBP15.72■□□□□ 0.11
CCDC78-211ENST00000481804 CPLX4Q7Z7G2 160 aa15.72■□□□□ 0.11
CCDC78-211ENST00000481804 TRIM31Q9BZY9 425 aa15.72■□□□□ 0.11
CCDC78-211ENST00000481804 ISCUQ9H1K1 167 aa15.72■□□□□ 0.11
CCDC78-211ENST00000481804 VCPKMTQ9H867 229 aa15.72■□□□□ 0.11
CCDC78-211ENST00000481804 NOL4O94818 638 aa15.72■□□□□ 0.11
CCDC78-211ENST00000481804 CCDC172P0C7W6 258 aa15.72■□□□□ 0.11
CCDC78-211ENST00000481804 CUL1Q13616 776 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms