RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 RHOBTB3O94955 611 aa12.55□□□□□ -0.4
DDX39B-219ENST00000481456 IL6STP40189 918 aaPredicted RBP12.55□□□□□ -0.4
DDX39B-219ENST00000481456 ZKSCAN8Q15776 578 aaPredicted RBP12.55□□□□□ -0.4
DDX39B-219ENST00000481456 PPP4R3CPQ6ZMV5 832 aa12.55□□□□□ -0.4
DDX39B-219ENST00000481456 DGKHQ86XP1 1220 aa12.55□□□□□ -0.4
DDX39B-219ENST00000481456 ZNF622Q969S3 477 aaKnown RBP eCLIP12.55□□□□□ -0.41e-14■□□□□ 11
DDX39B-219ENST00000481456 LRRD1A4D1F6 860 aa12.55□□□□□ -0.4
DDX39B-219ENST00000481456 RASGRF2O14827 1237 aa12.55□□□□□ -0.4
DDX39B-219ENST00000481456 TROVE2P10155 538 aaKnown RBP eCLIP12.55□□□□□ -0.4
DDX39B-219ENST00000481456 VPS52Q8N1B4 723 aa12.55□□□□□ -0.4
DDX39B-219ENST00000481456 KNDC1Q76NI1 1749 aa12.55□□□□□ -0.4
DDX39B-219ENST00000481456 SARSP49591 514 aaKnown RBP12.55□□□□□ -0.4
DDX39B-219ENST00000481456 FAM83BQ5T0W9 1011 aa12.55□□□□□ -0.4
DDX39B-219ENST00000481456 MRRFQ96E11 262 aaKnown RBP12.55□□□□□ -0.4
DDX39B-219ENST00000481456 DIP2AQ14689 1571 aa12.54□□□□□ -0.4
DDX39B-219ENST00000481456 ADAMTS2O95450 1211 aa12.54□□□□□ -0.4
DDX39B-219ENST00000481456 ADCY8P40145 1251 aa12.54□□□□□ -0.4
DDX39B-219ENST00000481456 TOB1P50616 345 aaPredicted RBP12.54□□□□□ -0.4
DDX39B-219ENST00000481456 RPS8P62241 208 aaKnown RBP12.54□□□□□ -0.4
DDX39B-219ENST00000481456 IL9RQ01113 521 aa12.54□□□□□ -0.4
DDX39B-219ENST00000481456 CHMP6Q96FZ7 201 aa12.54□□□□□ -0.4
DDX39B-219ENST00000481456 EMILIN3Q9NT22 766 aa12.54□□□□□ -0.4
DDX39B-219ENST00000481456 RBM12Q9NTZ6 932 aaKnown RBP12.54□□□□□ -0.4
DDX39B-219ENST00000481456 PP2D1A8MPX8 630 aa12.54□□□□□ -0.4
DDX39B-219ENST00000481456 STAMBPO95630 424 aa12.54□□□□□ -0.4
DDX39B-219ENST00000481456 SLC1A4P43007 532 aa12.54□□□□□ -0.4
DDX39B-219ENST00000481456 AARSP49588 968 aaKnown RBP eCLIP12.54□□□□□ -0.4
DDX39B-219ENST00000481456 CEP63Q96MT8 703 aa12.54□□□□□ -0.4
DDX39B-219ENST00000481456 ELAC2Q9BQ52 826 aaKnown RBP12.54□□□□□ -0.4
DDX39B-219ENST00000481456 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.54□□□□□ -0.49e-25■□□□□ 9.5
DDX39B-219ENST00000481456 ZBTB1Q9Y2K1 713 aa12.54□□□□□ -0.4
DDX39B-219ENST00000481456 ARHGEF35A5YM69 484 aa12.54□□□□□ -0.4
DDX39B-219ENST00000481456 RPS6KA5O75582 802 aa12.54□□□□□ -0.4
DDX39B-219ENST00000481456 FGGP02679 453 aa12.54□□□□□ -0.4
DDX39B-219ENST00000481456 PACS2Q86VP3 889 aa12.54□□□□□ -0.4
DDX39B-219ENST00000481456 TXLNGQ9NUQ3 528 aa12.54□□□□□ -0.4
DDX39B-219ENST00000481456 CYP2J2P51589 502 aa12.54□□□□□ -0.4
DDX39B-219ENST00000481456 KDM7AQ6ZMT4 941 aa12.54□□□□□ -0.4
DDX39B-219ENST00000481456 BBOF1Q8ND07 529 aa12.54□□□□□ -0.4
DDX39B-219ENST00000481456 TRIM6Q9C030 488 aaPredicted RBP12.54□□□□□ -0.4
DDX39B-219ENST00000481456 BTG4Q9NY30 223 aa12.54□□□□□ -0.4
DDX39B-219ENST00000481456 DIP2BQ9P265 1576 aa12.54□□□□□ -0.4
DDX39B-219ENST00000481456 CCDC160A6NGH7 325 aa12.53□□□□□ -0.4
DDX39B-219ENST00000481456 ATF2P15336 505 aa12.53□□□□□ -0.4
DDX39B-219ENST00000481456 GCFC2P16383 781 aaKnown RBP12.53□□□□□ -0.4
DDX39B-219ENST00000481456 RBBP5Q15291 538 aaKnown RBP12.53□□□□□ -0.4
DDX39B-219ENST00000481456 UAP1Q16222 522 aaPredicted RBP12.53□□□□□ -0.4
DDX39B-219ENST00000481456 TXNRD1Q16881 649 aa12.53□□□□□ -0.4
DDX39B-219ENST00000481456 ARHGEF18Q6ZSZ5 1173 aa12.53□□□□□ -0.4
DDX39B-219ENST00000481456 FOXP4Q8IVH2 680 aaPredicted RBP12.53□□□□□ -0.4
DDX39B-219ENST00000481456 GUF1Q8N442 669 aaKnown RBP12.53□□□□□ -0.4
DDX39B-219ENST00000481456 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.53□□□□□ -0.42e-16■□□□□ 8.6
DDX39B-219ENST00000481456 CCSER1Q9C0I3 900 aa12.53□□□□□ -0.4
DDX39B-219ENST00000481456 SLITRK6Q9H5Y7 841 aa12.53□□□□□ -0.4
DDX39B-219ENST00000481456 PTPN22Q9Y2R2 807 aa12.53□□□□□ -0.4
DDX39B-219ENST00000481456 TRIM28Q13263 835 aaKnown RBP12.53□□□□□ -0.4
DDX39B-219ENST00000481456 PLCB4Q15147 1175 aa12.53□□□□□ -0.4
DDX39B-219ENST00000481456 PTGISQ16647 500 aa12.53□□□□□ -0.4
DDX39B-219ENST00000481456 GCNT4Q9P109 453 aa12.53□□□□□ -0.4
DDX39B-219ENST00000481456 SUFUQ9UMX1 484 aa12.53□□□□□ -0.4
DDX39B-219ENST00000481456 ADAMTS13Q76LX8 1427 aa12.53□□□□□ -0.4
DDX39B-219ENST00000481456 FAM237AA0A1B0GTK4 181 aa12.53□□□□□ -0.4
DDX39B-219ENST00000481456 SSU72P8A0A1W2PR75 194 aa12.53□□□□□ -0.4
DDX39B-219ENST00000481456 FAM170AA1A519 330 aa12.53□□□□□ -0.4
DDX39B-219ENST00000481456 CFAP73A6NFT4 308 aa12.53□□□□□ -0.4
DDX39B-219ENST00000481456 MYO1FO00160 1098 aa12.53□□□□□ -0.4
DDX39B-219ENST00000481456 KRT14P02533 472 aa12.53□□□□□ -0.4
DDX39B-219ENST00000481456 MAN1A1P33908 653 aa12.53□□□□□ -0.4
DDX39B-219ENST00000481456 SLCO1A2P46721 670 aa12.53□□□□□ -0.4
DDX39B-219ENST00000481456 ORC2Q13416 577 aaPredicted RBP12.53□□□□□ -0.4
DDX39B-219ENST00000481456 TAF11Q15544 211 aa12.53□□□□□ -0.4
DDX39B-219ENST00000481456 GIMAP8Q8ND71 665 aaPredicted RBP12.53□□□□□ -0.4
DDX39B-219ENST00000481456 MS4A14Q96JA4 679 aa12.53□□□□□ -0.4
DDX39B-219ENST00000481456 PIGSQ96S52 555 aa12.53□□□□□ -0.4
DDX39B-219ENST00000481456 IMPG2Q9BZV3 1241 aa12.53□□□□□ -0.4
DDX39B-219ENST00000481456 VPS37BQ9H9H4 285 aa12.53□□□□□ -0.4
DDX39B-219ENST00000481456 EPB41L4AQ9HCS5 686 aaPredicted RBP12.53□□□□□ -0.4
DDX39B-219ENST00000481456 FBXL5Q9UKA1 691 aa12.53□□□□□ -0.4
DDX39B-219ENST00000481456 TSPOAP1O95153 1857 aa12.53□□□□□ -0.4
DDX39B-219ENST00000481456 FAM107AO95990 144 aa12.53□□□□□ -0.4
DDX39B-219ENST00000481456 FCER1AP12319 257 aa12.53□□□□□ -0.4
DDX39B-219ENST00000481456 ITIH3Q06033 890 aa12.53□□□□□ -0.4
DDX39B-219ENST00000481456 FOXR1Q6PIV2 292 aa12.53□□□□□ -0.4
DDX39B-219ENST00000481456 GFPT2O94808 682 aa12.52□□□□□ -0.4
DDX39B-219ENST00000481456 ELF1P32519 619 aa12.52□□□□□ -0.4
DDX39B-219ENST00000481456 PDE6CP51160 858 aa12.52□□□□□ -0.4
DDX39B-219ENST00000481456 WDR44Q5JSH3 913 aa12.52□□□□□ -0.4
DDX39B-219ENST00000481456 ANKRD20A3Q5VUR7 823 aa12.52□□□□□ -0.4
DDX39B-219ENST00000481456 STAG2Q8N3U4 1231 aa12.52□□□□□ -0.4
DDX39B-219ENST00000481456 RNPC3Q96LT9 517 aaKnown RBP12.52□□□□□ -0.4
DDX39B-219ENST00000481456 PACSIN2Q9UNF0 486 aaPredicted RBP12.52□□□□□ -0.4
DDX39B-219ENST00000481456 TFR2Q9UP52 801 aa12.52□□□□□ -0.4
DDX39B-219ENST00000481456 EVI5O60447 810 aa12.52□□□□□ -0.41
DDX39B-219ENST00000481456 HERVK_113P62684 666 aa12.52□□□□□ -0.41
DDX39B-219ENST00000481456 HLFQ16534 295 aa12.52□□□□□ -0.41
DDX39B-219ENST00000481456 PRR16Q569H4 304 aa12.52□□□□□ -0.41
DDX39B-219ENST00000481456 SUGP1Q8IWZ8 645 aaKnown RBP12.52□□□□□ -0.41
DDX39B-219ENST00000481456 RAD54LQ92698 747 aa12.52□□□□□ -0.41
DDX39B-219ENST00000481456 GBP5Q96PP8 586 aa12.52□□□□□ -0.41
DDX39B-219ENST00000481456 SYNCQ9H7C4 482 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms