RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 MXRA8Q9BRK3 442 aa23.02■■□□□ 1.28
VPS36-204ENST00000480923 SLKQ9H2G2 1235 aaPredicted RBP23.02■■□□□ 1.28
VPS36-204ENST00000480923 VPS54Q9P1Q0 977 aa23.02■■□□□ 1.28
VPS36-204ENST00000480923 HAS3O00219 553 aa23.01■■□□□ 1.27
VPS36-204ENST00000480923 ATP9AO75110 1047 aa23.01■■□□□ 1.27
VPS36-204ENST00000480923 LGALS2P05162 132 aa23.01■■□□□ 1.27
VPS36-204ENST00000480923 SREBF1P36956 1147 aa23.01■■□□□ 1.27
VPS36-204ENST00000480923 AK2P54819 239 aa23.01■■□□□ 1.27
VPS36-204ENST00000480923 PTGISQ16647 500 aa23.01■■□□□ 1.27
VPS36-204ENST00000480923 GDF6Q6KF10 455 aaPredicted RBP23.01■■□□□ 1.27
VPS36-204ENST00000480923 SESTD1Q86VW0 696 aa23.01■■□□□ 1.27
VPS36-204ENST00000480923 REXO1Q8N1G1 1221 aaKnown RBP23.01■■□□□ 1.27
VPS36-204ENST00000480923 RNPC3Q96LT9 517 aaKnown RBP23.01■■□□□ 1.27
VPS36-204ENST00000480923 GPR20Q99678 358 aa23.01■■□□□ 1.27
VPS36-204ENST00000480923 HDAC6Q9UBN7 1215 aa23.01■■□□□ 1.27
VPS36-204ENST00000480923 TPCN1Q9ULQ1 816 aa23.01■■□□□ 1.27
VPS36-204ENST00000480923 MAFGO15525 162 aa23■■□□□ 1.27
VPS36-204ENST00000480923 ACRP10323 421 aa23■■□□□ 1.27
VPS36-204ENST00000480923 KCNA2P16389 499 aa23■■□□□ 1.27
VPS36-204ENST00000480923 ZNF76P36508 570 aa23■■□□□ 1.27
VPS36-204ENST00000480923 ARHGAP4P98171 946 aa23■■□□□ 1.27
VPS36-204ENST00000480923 UTP14CQ5TAP6 766 aaKnown RBP23■■□□□ 1.27
VPS36-204ENST00000480923 MCTP2Q6DN12 878 aa23■■□□□ 1.27
VPS36-204ENST00000480923 BICD2Q8TD16 824 aa23■■□□□ 1.27
VPS36-204ENST00000480923 IL17RAQ96F46 866 aa23■■□□□ 1.27
VPS36-204ENST00000480923 C16orf70Q9BSU1 422 aa23■■□□□ 1.27
VPS36-204ENST00000480923 WNT8AQ9H1J5 351 aa23■■□□□ 1.27
VPS36-204ENST00000480923 GTF2IRD1Q9UHL9 959 aa23■■□□□ 1.27
VPS36-204ENST00000480923 H3BRB1 525 aa22.99■■□□□ 1.27
VPS36-204ENST00000480923 ADAMTS3O15072 1205 aa22.99■■□□□ 1.27
VPS36-204ENST00000480923 DEXIO95424 95 aa22.99■■□□□ 1.27
VPS36-204ENST00000480923 NLRP5P59047 1200 aa22.99■■□□□ 1.27
VPS36-204ENST00000480923 SCRN1Q12765 414 aa22.99■■□□□ 1.27
VPS36-204ENST00000480923 CEP55Q53EZ4 464 aa22.99■■□□□ 1.27
VPS36-204ENST00000480923 CYP2W1Q8TAV3 490 aa22.99■■□□□ 1.27
VPS36-204ENST00000480923 SCLYQ96I15 445 aa22.99■■□□□ 1.27
VPS36-204ENST00000480923 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.99■■□□□ 1.27
VPS36-204ENST00000480923 TUT1Q9H6E5 874 aaKnown RBP22.99■■□□□ 1.27
VPS36-204ENST00000480923 IL23AQ9NPF7 189 aa22.99■■□□□ 1.27
VPS36-204ENST00000480923 SH3GLB2Q9NR46 395 aa22.99■■□□□ 1.27
VPS36-204ENST00000480923 KCNH7Q9NS40 1196 aa22.99■■□□□ 1.27
VPS36-204ENST00000480923 TELO2Q9Y4R8 837 aa22.99■■□□□ 1.27
VPS36-204ENST00000480923 PFKFB2O60825 505 aa22.98■■□□□ 1.27
VPS36-204ENST00000480923 CDKL5O76039 1030 aa22.98■■□□□ 1.27
VPS36-204ENST00000480923 NEK4P51957 841 aa22.98■■□□□ 1.27
VPS36-204ENST00000480923 BFSP2Q13515 415 aa22.98■■□□□ 1.27
VPS36-204ENST00000480923 C8orf34Q49A92 452 aa22.98■■□□□ 1.27
VPS36-204ENST00000480923 C16orf59Q7L2K0 433 aa22.98■■□□□ 1.27
VPS36-204ENST00000480923 RETREG2Q8NC44 543 aa22.98■■□□□ 1.27
VPS36-204ENST00000480923 RASGRP4Q8TDF6 673 aa22.98■■□□□ 1.27
VPS36-204ENST00000480923 ARP10275 920 aa22.97■■□□□ 1.27
VPS36-204ENST00000480923 TMEM240Q5SV17 173 aa22.97■■□□□ 1.27
VPS36-204ENST00000480923 PSRC1Q6PGN9 363 aaPredicted RBP22.97■■□□□ 1.27
VPS36-204ENST00000480923 ZNF365Q70YC5 407 aa22.97■■□□□ 1.27
VPS36-204ENST00000480923 CCDC155Q8N6L0 562 aa22.97■■□□□ 1.27
VPS36-204ENST00000480923 MYH7BA7E2Y1 1941 aa22.96■■□□□ 1.27
VPS36-204ENST00000480923 TCF7P36402 384 aaPredicted RBP22.96■■□□□ 1.27
VPS36-204ENST00000480923 TRIM50Q86XT4 487 aa22.96■■□□□ 1.27
VPS36-204ENST00000480923 SEPT1Q8WYJ6 367 aa22.96■■□□□ 1.27
VPS36-204ENST00000480923 ZNF215Q9UL58 517 aaPredicted RBP22.96■■□□□ 1.27
VPS36-204ENST00000480923 MEIS1O00470 390 aa22.95■■□□□ 1.26
VPS36-204ENST00000480923 PITPNM1O00562 1244 aa22.95■■□□□ 1.26
VPS36-204ENST00000480923 ZNF200P98182 395 aaPredicted RBP22.95■■□□□ 1.26
VPS36-204ENST00000480923 NIPA1Q7RTP0 329 aa22.95■■□□□ 1.26
VPS36-204ENST00000480923 PLA2G4DQ86XP0 818 aa22.95■■□□□ 1.26
VPS36-204ENST00000480923 RPUSD2Q8IZ73 545 aaKnown RBP22.95■■□□□ 1.26
VPS36-204ENST00000480923 AIFM3Q96NN9 605 aa22.95■■□□□ 1.26
VPS36-204ENST00000480923 CTAGE1Q96RT6 745 aa22.95■■□□□ 1.26
VPS36-204ENST00000480923 SDF4Q9BRK5 362 aa22.95■■□□□ 1.26
VPS36-204ENST00000480923 AGO4Q9HCK5 861 aaKnown RBP22.95■■□□□ 1.26
VPS36-204ENST00000480923 JPH1Q9HDC5 661 aaPredicted RBP22.95■■□□□ 1.26
VPS36-204ENST00000480923 GSTTP1A0A1W2PQM5 241 aa22.94■■□□□ 1.26
VPS36-204ENST00000480923 C17orf102A2RUQ5 167 aa22.94■■□□□ 1.26
VPS36-204ENST00000480923 FGBP02675 491 aa22.94■■□□□ 1.26
VPS36-204ENST00000480923 CYP3A4P08684 503 aa22.94■■□□□ 1.26
VPS36-204ENST00000480923 SMIM10L2AP0DMW4 78 aa22.94■■□□□ 1.26
VPS36-204ENST00000480923 SMIM10L2BP0DMW5 78 aa22.94■■□□□ 1.26
VPS36-204ENST00000480923 GPR153Q6NV75 609 aa22.94■■□□□ 1.26
VPS36-204ENST00000480923 CAGE1Q8TC20 777 aa22.94■■□□□ 1.26
VPS36-204ENST00000480923 CRYGNQ8WXF5 182 aa22.94■■□□□ 1.26
VPS36-204ENST00000480923 SLC9A2Q9UBY0 812 aa22.94■■□□□ 1.26
VPS36-204ENST00000480923 NFASCO94856 1347 aa22.93■■□□□ 1.26
VPS36-204ENST00000480923 FAM86B1E9PN63 330 aa22.93■■□□□ 1.26
VPS36-204ENST00000480923 FAM86B2P0C5J1 330 aa22.93■■□□□ 1.26
VPS36-204ENST00000480923 PTK7Q13308 1070 aa22.93■■□□□ 1.26
VPS36-204ENST00000480923 ME3Q16798 604 aa22.93■■□□□ 1.26
VPS36-204ENST00000480923 DEFB128Q7Z7B8 93 aa22.93■■□□□ 1.26
VPS36-204ENST00000480923 NECAB1Q8N987 351 aa22.93■■□□□ 1.26
VPS36-204ENST00000480923 DHX38Q92620 1227 aaKnown RBP22.93■■□□□ 1.26
VPS36-204ENST00000480923 PCDHA4Q9UN74 947 aa22.93■■□□□ 1.26
VPS36-204ENST00000480923 LAMA3Q16787 3333 aa22.92■■□□□ 1.26
VPS36-204ENST00000480923 STK36Q9NRP7 1315 aa22.92■■□□□ 1.26
VPS36-204ENST00000480923 DTNBO60941 627 aa22.92■■□□□ 1.26
VPS36-204ENST00000480923 LARGE1O95461 756 aa22.92■■□□□ 1.26
VPS36-204ENST00000480923 IQCF3P0C7M6 154 aa22.92■■□□□ 1.26
VPS36-204ENST00000480923 ITGB3BPQ13352 177 aaPredicted RBP22.92■■□□□ 1.26
VPS36-204ENST00000480923 HIC1Q14526 733 aa22.92■■□□□ 1.26
VPS36-204ENST00000480923 AFAP1L1Q8TED9 768 aa22.92■■□□□ 1.26
VPS36-204ENST00000480923 GLG1Q92896 1179 aa22.92■■□□□ 1.26
VPS36-204ENST00000480923 ATP6V0A1Q93050 837 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms