RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 PPP6R2O75170 966 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 SRGAP2CP0DJJ0 459 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 C1orf228Q6PIY5 440 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 FAM186BQ8IYM0 893 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 GTF2IP78347 998 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 SLFN12LQ6IEE8 588 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 CRLF3Q8IUI8 442 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 DCLK2Q8N568 766 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 IRAK4Q9NWZ3 460 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 LEMD3Q9Y2U8 911 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 ABCC4O15439 1325 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 PYGBP11216 843 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 CA4P22748 312 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 SEPT8Q92599 483 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 CCDC151A5D8V7 595 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 EFCAB14O75071 495 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 POLA2Q14181 598 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 MESDQ14696 234 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 LZICQ8WZA0 190 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 PANX2Q96RD6 677 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 SLC39A2Q9NP94 309 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 PRKAG2Q9UGJ0 569 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 USP17L12C9JPN9 530 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 USP17L21D6R901 530 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 POC1B-GALNT4F8VUJ3 575 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 RASGRF2O14827 1237 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 LRRC63Q05C16 580 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 RDH13Q8NBN7 331 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 POLR3CQ9BUI4 534 aaPredicted RBP10.29□□□□□ -0.76
VEGFA-212ENST00000480614 LRFN2Q9ULH4 789 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 ARHGEF5Q12774 1597 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 IFT88Q13099 833 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 KANSL2Q9H9L4 492 aa10.29□□□□□ -0.76
VEGFA-212ENST00000480614 IKBKBO14920 756 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 CAV1Q03135 178 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 MYLK4Q86YV6 388 aaPredicted RBP10.28□□□□□ -0.76
VEGFA-212ENST00000480614 PAWRQ96IZ0 340 aaKnown RBP10.28□□□□□ -0.76
VEGFA-212ENST00000480614 KRT82Q9NSB4 513 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 FANCLQ9NW38 375 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 CDC42BPGQ6DT37 1551 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 KCNA6P17658 529 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 ST13P4Q8IZP2 240 aaPredicted RBP10.28□□□□□ -0.76
VEGFA-212ENST00000480614 SYNGAP1Q96PV0 1343 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 BTDP43251 543 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 STAT2P52630 851 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 PCGF5Q86SE9 256 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 ZNF577Q9BSK1 485 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 DPH5Q9H2P9 285 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.28□□□□□ -0.76
VEGFA-212ENST00000480614 RASSF7Q02833 373 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 TMCO4Q5TGY1 634 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 ADAT2Q7Z6V5 191 aaKnown RBP10.28□□□□□ -0.76
VEGFA-212ENST00000480614 GIMAP8Q8ND71 665 aaPredicted RBP10.28□□□□□ -0.76
VEGFA-212ENST00000480614 RPAP1Q9BWH6 1393 aaPredicted RBP10.28□□□□□ -0.76
VEGFA-212ENST00000480614 EXOC1LA0A1B0GW35 172 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 BAG6P46379 1132 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 C6orf118Q5T5N4 469 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 SCG3Q8WXD2 468 aaKnown RBP10.28□□□□□ -0.76
VEGFA-212ENST00000480614 GADD45BO75293 160 aaPredicted RBP10.28□□□□□ -0.76
VEGFA-212ENST00000480614 MXI1P50539 228 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 DHX9Q08211 1270 aaKnown RBP10.28□□□□□ -0.76
VEGFA-212ENST00000480614 ADCY2Q08462 1091 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 G2E3Q7L622 706 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 PDIK1LQ8N165 341 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 OTUD7AQ8TE49 926 aaPredicted RBP10.28□□□□□ -0.76
VEGFA-212ENST00000480614 TRAIPQ9BWF2 469 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 PCDHA4Q9UN74 947 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 DIS3Q9Y2L1 958 aaKnown RBP10.28□□□□□ -0.76
VEGFA-212ENST00000480614 BUB1O43683 1085 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 SYF2O95926 243 aaKnown RBP10.28□□□□□ -0.76
VEGFA-212ENST00000480614 PSAPP07602 524 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 TEDDM1Q5T9Z0 273 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 TTC39CQ8N584 583 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 EXOC4Q96A65 974 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 TESK2Q96S53 571 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 OLA1Q9NTK5 396 aaKnown RBP10.28□□□□□ -0.76
VEGFA-212ENST00000480614 SUN2Q9UH99 717 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 MTMR6Q9Y217 621 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 HSPD1P10809 573 aaKnown RBP10.28□□□□□ -0.76
VEGFA-212ENST00000480614 GPBP1L1Q9HC44 474 aaPredicted RBP10.28□□□□□ -0.76
VEGFA-212ENST00000480614 ZFYVE16Q7Z3T8 1539 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 GLE1Q53GS7 698 aaKnown RBP10.28□□□□□ -0.76
VEGFA-212ENST00000480614 CENPUQ71F23 418 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 FBXO18Q8NFZ0 1043 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 KMT5AQ9NQR1 393 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 PCDHA7Q9UN72 937 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 SYNJ2BP-COX16A0A087WUM0 186 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 VGLL3A8MV65 326 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 TMEM232C9JQI7 657 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 PCCAP05165 728 aaPredicted RBP10.28□□□□□ -0.76
VEGFA-212ENST00000480614 OR9Q1Q8NGQ5 310 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 FMO2Q99518 471 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 NDE1Q9NXR1 346 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 COX16Q9P0S2 106 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 PTPN22Q9Y2R2 807 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 YEATS2Q9ULM3 1422 aa10.28□□□□□ -0.76
VEGFA-212ENST00000480614 PAPOLAP51003 745 aaKnown RBP10.27□□□□□ -0.76
VEGFA-212ENST00000480614 NOP14P78316 857 aaKnown RBP10.27□□□□□ -0.76
VEGFA-212ENST00000480614 KRT1P04264 644 aa10.27□□□□□ -0.76
VEGFA-212ENST00000480614 ZKSCAN8Q15776 578 aaPredicted RBP10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms