RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 GJA10Q969M2 543 aa11.74□□□□□ -0.53
LINC00173-203ENST00000480237 LENG9Q96B70 501 aa11.74□□□□□ -0.53
LINC00173-203ENST00000480237 DNAJC25Q9H1X3 360 aa11.74□□□□□ -0.53
LINC00173-203ENST00000480237 KDM3AQ9Y4C1 1321 aa11.73□□□□□ -0.53
LINC00173-203ENST00000480237 CCL15-CCL14A0A0B4J2E2 113 aa11.73□□□□□ -0.53
LINC00173-203ENST00000480237 SMC2O95347 1197 aa11.73□□□□□ -0.53
LINC00173-203ENST00000480237 CETPP11597 493 aa11.73□□□□□ -0.53
LINC00173-203ENST00000480237 EIF2AK2P19525 551 aaKnown RBP11.73□□□□□ -0.53
LINC00173-203ENST00000480237 GTF2A2P52657 109 aa11.73□□□□□ -0.53
LINC00173-203ENST00000480237 MOGSQ13724 837 aa11.73□□□□□ -0.53
LINC00173-203ENST00000480237 BAATQ14032 418 aaPredicted RBP11.73□□□□□ -0.53
LINC00173-203ENST00000480237 PDIA5Q14554 519 aa11.73□□□□□ -0.53
LINC00173-203ENST00000480237 CCL15Q16663 113 aa11.73□□□□□ -0.53
LINC00173-203ENST00000480237 CEP55Q53EZ4 464 aa11.73□□□□□ -0.53
LINC00173-203ENST00000480237 ARHGEF16Q5VV41 709 aa11.73□□□□□ -0.53
LINC00173-203ENST00000480237 KRT79Q5XKE5 535 aa11.73□□□□□ -0.53
LINC00173-203ENST00000480237 PDXDC2PQ6P474 469 aa11.73□□□□□ -0.53
LINC00173-203ENST00000480237 RIOX2Q8IUF8 465 aa11.73□□□□□ -0.53
LINC00173-203ENST00000480237 CHST13Q8NET6 341 aa11.73□□□□□ -0.53
LINC00173-203ENST00000480237 IL31RAQ8NI17 732 aa11.73□□□□□ -0.53
LINC00173-203ENST00000480237 FAM200AQ8TCP9 573 aa11.73□□□□□ -0.53
LINC00173-203ENST00000480237 FAM20AQ96MK3 541 aa11.73□□□□□ -0.53
LINC00173-203ENST00000480237 RMDN3Q96TC7 470 aa11.73□□□□□ -0.53
LINC00173-203ENST00000480237 PLIN2Q99541 437 aa11.73□□□□□ -0.53
LINC00173-203ENST00000480237 SPATC1LQ9H0A9 340 aa11.73□□□□□ -0.53
LINC00173-203ENST00000480237 CUEDC2Q9H467 287 aa11.73□□□□□ -0.53
LINC00173-203ENST00000480237 BTBD7Q9P203 1132 aa11.73□□□□□ -0.53
LINC00173-203ENST00000480237 SIP14410 1827 aa11.72□□□□□ -0.53
LINC00173-203ENST00000480237 PFASO15067 1338 aa11.72□□□□□ -0.53
LINC00173-203ENST00000480237 IGLV3-22A0A075B6J6 115 aa11.72□□□□□ -0.53
LINC00173-203ENST00000480237 A0A087WWV3 80 aa11.72□□□□□ -0.53
LINC00173-203ENST00000480237 MSH4O15457 936 aa11.72□□□□□ -0.53
LINC00173-203ENST00000480237 CAVIN2O95810 425 aa11.72□□□□□ -0.53
LINC00173-203ENST00000480237 XRCC6P12956 609 aaKnown RBP eCLIP11.72□□□□□ -0.53
LINC00173-203ENST00000480237 NLRP12P59046 1061 aa11.72□□□□□ -0.53
LINC00173-203ENST00000480237 PGM5Q15124 567 aa11.72□□□□□ -0.53
LINC00173-203ENST00000480237 PROX2Q3B8N5 592 aa11.72□□□□□ -0.53
LINC00173-203ENST00000480237 PCNX4Q63HM2 1172 aa11.72□□□□□ -0.53
LINC00173-203ENST00000480237 HAUS3Q68CZ6 603 aa11.72□□□□□ -0.53
LINC00173-203ENST00000480237 NCAPH2Q6IBW4 605 aa11.72□□□□□ -0.53
LINC00173-203ENST00000480237 GPAT2Q6NUI2 795 aa11.72□□□□□ -0.53
LINC00173-203ENST00000480237 C11orf57Q6ZUT1 292 aaPredicted RBP11.72□□□□□ -0.53
LINC00173-203ENST00000480237 ERMNQ8TAM6 284 aa11.72□□□□□ -0.53
LINC00173-203ENST00000480237 CYP2W1Q8TAV3 490 aa11.72□□□□□ -0.53
LINC00173-203ENST00000480237 ANP32BQ92688 251 aaKnown RBP11.72□□□□□ -0.53
LINC00173-203ENST00000480237 PAGE5Q96GU1 130 aa11.72□□□□□ -0.53
LINC00173-203ENST00000480237 TAAR1Q96RJ0 339 aa11.72□□□□□ -0.53
LINC00173-203ENST00000480237 NAT10Q9H0A0 1025 aaKnown RBP11.72□□□□□ -0.53
LINC00173-203ENST00000480237 MAGEF1Q9HAY2 307 aa11.72□□□□□ -0.53
LINC00173-203ENST00000480237 A1CFQ9NQ94 594 aaKnown RBP11.72□□□□□ -0.53
LINC00173-203ENST00000480237 PXMP2Q9NR77 195 aa11.72□□□□□ -0.53
LINC00173-203ENST00000480237 FBXO40Q9UH90 709 aa11.72□□□□□ -0.53
LINC00173-203ENST00000480237 TUBE1Q9UJT0 475 aa11.72□□□□□ -0.53
LINC00173-203ENST00000480237 ITGBL1O95965 494 aaPredicted RBP11.71□□□□□ -0.53
LINC00173-203ENST00000480237 ZBTB48P10074 688 aaPredicted RBP11.71□□□□□ -0.53
LINC00173-203ENST00000480237 MYCLP12524 364 aaPredicted RBP11.71□□□□□ -0.53
LINC00173-203ENST00000480237 COPB2P35606 906 aa11.71□□□□□ -0.53
LINC00173-203ENST00000480237 CCT6AP40227 531 aaKnown RBP11.71□□□□□ -0.53
LINC00173-203ENST00000480237 HUNKP57058 714 aa11.71□□□□□ -0.53
LINC00173-203ENST00000480237 LRCH2Q5VUJ6 765 aa11.71□□□□□ -0.53
LINC00173-203ENST00000480237 NCAPG2Q86XI2 1143 aa11.71□□□□□ -0.53
LINC00173-203ENST00000480237 ANKRD35Q8N283 1001 aa11.71□□□□□ -0.53
LINC00173-203ENST00000480237 SMCR8Q8TEV9 937 aaPredicted RBP11.71□□□□□ -0.53
LINC00173-203ENST00000480237 GTF3C2Q8WUA4 911 aaPredicted RBP11.71□□□□□ -0.53
LINC00173-203ENST00000480237 STAMQ92783 540 aa11.71□□□□□ -0.53
LINC00173-203ENST00000480237 MXRA8Q9BRK3 442 aa11.71□□□□□ -0.53
LINC00173-203ENST00000480237 ZBED2Q9BTP6 218 aa11.71□□□□□ -0.53
LINC00173-203ENST00000480237 MMTAG2Q9BU76 263 aaKnown RBP11.71□□□□□ -0.53
LINC00173-203ENST00000480237 MAF1Q9H063 256 aa11.71□□□□□ -0.53
LINC00173-203ENST00000480237 CYP39A1Q9NYL5 469 aa11.71□□□□□ -0.53
LINC00173-203ENST00000480237 STK17AQ9UEE5 414 aa11.71□□□□□ -0.53
LINC00173-203ENST00000480237 PCDHA5Q9Y5H7 936 aa11.71□□□□□ -0.53
LINC00173-203ENST00000480237 TRIP12Q14669 1992 aaPredicted RBP11.71□□□□□ -0.54
LINC00173-203ENST00000480237 PEX10O60683 326 aa11.71□□□□□ -0.54
LINC00173-203ENST00000480237 GAS7O60861 476 aa11.71□□□□□ -0.54
LINC00173-203ENST00000480237 CCND2P30279 289 aa11.71□□□□□ -0.54
LINC00173-203ENST00000480237 ZNF165P49910 485 aa11.71□□□□□ -0.54
LINC00173-203ENST00000480237 MDM2Q00987 491 aaPredicted RBP11.71□□□□□ -0.54
LINC00173-203ENST00000480237 GRB10Q13322 594 aa11.71□□□□□ -0.54
LINC00173-203ENST00000480237 DPCR1Q3MIW9 517 aa11.71□□□□□ -0.54
LINC00173-203ENST00000480237 NAALADL2Q58DX5 795 aa11.71□□□□□ -0.54
LINC00173-203ENST00000480237 SPRYD7Q5W111 196 aa11.71□□□□□ -0.54
LINC00173-203ENST00000480237 ISM2Q6H9L7 571 aa11.71□□□□□ -0.54
LINC00173-203ENST00000480237 NIPA1Q7RTP0 329 aa11.71□□□□□ -0.54
LINC00173-203ENST00000480237 SH3RF1Q7Z6J0 888 aa11.71□□□□□ -0.54
LINC00173-203ENST00000480237 SLC5A5Q92911 643 aa11.71□□□□□ -0.54
LINC00173-203ENST00000480237 PDCD2LQ9BRP1 358 aa11.71□□□□□ -0.54
LINC00173-203ENST00000480237 ZNF577Q9BSK1 485 aa11.71□□□□□ -0.54
LINC00173-203ENST00000480237 NT5C3AQ9H0P0 336 aa11.71□□□□□ -0.54
LINC00173-203ENST00000480237 GPBP1L1Q9HC44 474 aaPredicted RBP11.71□□□□□ -0.54
LINC00173-203ENST00000480237 CBX8Q9HC52 389 aa11.71□□□□□ -0.54
LINC00173-203ENST00000480237 MAN1B1Q9UKM7 699 aa11.71□□□□□ -0.54
LINC00173-203ENST00000480237 PDHXO00330 501 aa11.7□□□□□ -0.54
LINC00173-203ENST00000480237 MEIS1O00470 390 aa11.7□□□□□ -0.54
LINC00173-203ENST00000480237 SLC26A4O43511 780 aa11.7□□□□□ -0.54
LINC00173-203ENST00000480237 CNMDO75829 334 aa11.7□□□□□ -0.54
LINC00173-203ENST00000480237 SLC25A27O95847 323 aa11.7□□□□□ -0.54
LINC00173-203ENST00000480237 CASP1P29466 404 aa11.7□□□□□ -0.54
LINC00173-203ENST00000480237 UVSSAQ2YD98 709 aa11.7□□□□□ -0.54
LINC00173-203ENST00000480237 CST9Q5W186 159 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms